RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 KIF14Q15058 1648 aa18.94■□□□□ 0.62
PCDH17-202ENST00000484979 KDM4AO75164 1064 aa18.94■□□□□ 0.62
PCDH17-202ENST00000484979 EMILIN1Q9Y6C2 1016 aa18.94■□□□□ 0.62
PCDH17-202ENST00000484979 KRT18P05783 430 aaKnown RBP18.94■□□□□ 0.62
PCDH17-202ENST00000484979 NAP1L1P55209 391 aaKnown RBP18.94■□□□□ 0.62
PCDH17-202ENST00000484979 MIS18AQ9NYP9 233 aa18.94■□□□□ 0.62
PCDH17-202ENST00000484979 CDKL5O76039 1030 aa18.93■□□□□ 0.62
PCDH17-202ENST00000484979 DBF4Q9UBU7 674 aaPredicted RBP18.93■□□□□ 0.62
PCDH17-202ENST00000484979 TMEM132AQ24JP5 1023 aa18.93■□□□□ 0.62
PCDH17-202ENST00000484979 GLRX3O76003 335 aaKnown RBP18.93■□□□□ 0.62
PCDH17-202ENST00000484979 AEBP1Q8IUX7 1158 aa18.93■□□□□ 0.62
PCDH17-202ENST00000484979 TEX13AQ9BXU3 409 aaPredicted RBP18.93■□□□□ 0.62
PCDH17-202ENST00000484979 TTC21BQ7Z4L5 1316 aa18.93■□□□□ 0.62
PCDH17-202ENST00000484979 LETM1O95202 739 aaPredicted RBP18.92■□□□□ 0.62
PCDH17-202ENST00000484979 FMNL2Q96PY5 1086 aa18.92■□□□□ 0.62
PCDH17-202ENST00000484979 ZNF287Q9HBT7 754 aa18.92■□□□□ 0.62
PCDH17-202ENST00000484979 ALDH1L2Q3SY69 923 aa18.92■□□□□ 0.62
PCDH17-202ENST00000484979 FILIP1LQ4L180 1135 aa18.92■□□□□ 0.62
PCDH17-202ENST00000484979 CAVIN4Q5BKX8 364 aa18.92■□□□□ 0.62
PCDH17-202ENST00000484979 NUP133Q8WUM0 1156 aa18.92■□□□□ 0.62
PCDH17-202ENST00000484979 DCTN1Q14203 1278 aa18.91■□□□□ 0.62
PCDH17-202ENST00000484979 FIBPO43427 364 aa18.91■□□□□ 0.62
PCDH17-202ENST00000484979 AIDAQ96BJ3 306 aa18.91■□□□□ 0.62
PCDH17-202ENST00000484979 BICRAQ9NZM4 1560 aa18.91■□□□□ 0.62
PCDH17-202ENST00000484979 IFNL2Q8IZJ0 200 aa18.91■□□□□ 0.62
PCDH17-202ENST00000484979 TMEM57Q8N5G2 664 aa18.91■□□□□ 0.62
PCDH17-202ENST00000484979 USHBP1Q8N6Y0 703 aa18.91■□□□□ 0.62
PCDH17-202ENST00000484979 EXOC6BQ9Y2D4 811 aa18.91■□□□□ 0.62
PCDH17-202ENST00000484979 PDIA4P13667 645 aaKnown RBP18.9■□□□□ 0.62
PCDH17-202ENST00000484979 IFIT5Q13325 482 aaKnown RBP18.9■□□□□ 0.62
PCDH17-202ENST00000484979 RAB11FIP3O75154 756 aa18.9■□□□□ 0.62
PCDH17-202ENST00000484979 HYPKQ9NX55 129 aa18.9■□□□□ 0.62
PCDH17-202ENST00000484979 NOL7Q9UMY1 257 aaKnown RBP18.9■□□□□ 0.62
PCDH17-202ENST00000484979 TNRQ92752 1358 aa18.9■□□□□ 0.62
PCDH17-202ENST00000484979 ZNF608Q9ULD9 1512 aaPredicted RBP18.89■□□□□ 0.62
PCDH17-202ENST00000484979 CCDC173Q0VFZ6 552 aa18.89■□□□□ 0.61
PCDH17-202ENST00000484979 ZSCAN31Q96LW9 406 aaPredicted RBP18.89■□□□□ 0.61
PCDH17-202ENST00000484979 WDR33Q9C0J8 1336 aaKnown RBP18.89■□□□□ 0.61
PCDH17-202ENST00000484979 MAP3K1Q13233 1512 aa18.89■□□□□ 0.61
PCDH17-202ENST00000484979 ZFYVE27Q5T4F4 411 aa18.88■□□□□ 0.61
PCDH17-202ENST00000484979 STK11IPQ8N1F8 1099 aa18.88■□□□□ 0.61
PCDH17-202ENST00000484979 TRMT112Q9UI30 125 aaKnown RBP18.88■□□□□ 0.61
PCDH17-202ENST00000484979 KRT85P78386 507 aa18.88■□□□□ 0.61
PCDH17-202ENST00000484979 DNAAF4Q8WXU2 420 aa18.88■□□□□ 0.61
PCDH17-202ENST00000484979 SSH1Q8WYL5 1049 aa18.88■□□□□ 0.61
PCDH17-202ENST00000484979 URB2Q14146 1524 aaKnown RBP18.88■□□□□ 0.61
PCDH17-202ENST00000484979 TOM1O60784 492 aa18.88■□□□□ 0.61
PCDH17-202ENST00000484979 LARP1BQ659C4 914 aaKnown RBP18.88■□□□□ 0.61
PCDH17-202ENST00000484979 CWC27Q6UX04 472 aaKnown RBP18.88■□□□□ 0.61
PCDH17-202ENST00000484979 MAGEC2Q9UBF1 373 aaPredicted RBP18.88■□□□□ 0.61
PCDH17-202ENST00000484979 MYD88Q99836 296 aa18.87■□□□□ 0.61
PCDH17-202ENST00000484979 IMMTQ16891 758 aaKnown RBP18.87■□□□□ 0.61
PCDH17-202ENST00000484979 NOS1P29475 1434 aa18.87■□□□□ 0.61
PCDH17-202ENST00000484979 NSD2O96028 1365 aa18.87■□□□□ 0.61
PCDH17-202ENST00000484979 STK3Q13188 491 aa18.87■□□□□ 0.61
PCDH17-202ENST00000484979 KRI1Q8N9T8 703 aaKnown RBP18.87■□□□□ 0.61
PCDH17-202ENST00000484979 MAP4K4O95819 1239 aaPredicted RBP18.86■□□□□ 0.61
PCDH17-202ENST00000484979 TRIM5Q9C035 493 aa18.86■□□□□ 0.61
PCDH17-202ENST00000484979 U3KPZ7 1027 aaPredicted RBP18.86■□□□□ 0.61
PCDH17-202ENST00000484979 STIM1Q13586 685 aa18.86■□□□□ 0.61
PCDH17-202ENST00000484979 NFKBIBQ15653 356 aa18.86■□□□□ 0.61
PCDH17-202ENST00000484979 PDILTQ8N807 584 aa18.86■□□□□ 0.61
PCDH17-202ENST00000484979 BMP2KQ9NSY1 1161 aaPredicted RBP18.86■□□□□ 0.61
PCDH17-202ENST00000484979 ME1P48163 572 aa18.86■□□□□ 0.61
PCDH17-202ENST00000484979 CCDC184Q52MB2 194 aa18.86■□□□□ 0.61
PCDH17-202ENST00000484979 PCF11O94913 1555 aaKnown RBP18.86■□□□□ 0.61
PCDH17-202ENST00000484979 FAM135AQ9P2D6 1515 aa18.85■□□□□ 0.61
PCDH17-202ENST00000484979 ACEP12821 1306 aa18.85■□□□□ 0.61
PCDH17-202ENST00000484979 NPHP3Q7Z494 1330 aa18.85■□□□□ 0.61
PCDH17-202ENST00000484979 MSH6P52701 1360 aa18.85■□□□□ 0.61
PCDH17-202ENST00000484979 JAKMIP1Q96N16 626 aaKnown RBP18.85■□□□□ 0.61
PCDH17-202ENST00000484979 A0A087WZG4 1122 aa18.85■□□□□ 0.61
PCDH17-202ENST00000484979 TNNT3P45378 269 aaPredicted RBP18.85■□□□□ 0.61
PCDH17-202ENST00000484979 CEBPZQ03701 1054 aaKnown RBP18.85■□□□□ 0.61
PCDH17-202ENST00000484979 RNF214Q8ND24 703 aa18.85■□□□□ 0.61
PCDH17-202ENST00000484979 MNS1Q8NEH6 495 aa18.85■□□□□ 0.61
PCDH17-202ENST00000484979 PRPF40AO75400 957 aaKnown RBP18.84■□□□□ 0.61
PCDH17-202ENST00000484979 MRE11P49959 708 aa18.84■□□□□ 0.61
PCDH17-202ENST00000484979 WASF1Q92558 559 aa18.84■□□□□ 0.61
PCDH17-202ENST00000484979 WDHD1O75717 1129 aaPredicted RBP18.84■□□□□ 0.61
PCDH17-202ENST00000484979 RDXP35241 583 aaKnown RBP18.84■□□□□ 0.61
PCDH17-202ENST00000484979 SCAF11Q99590 1463 aaKnown RBP18.84■□□□□ 0.61
PCDH17-202ENST00000484979 TRAK2O60296 914 aa18.84■□□□□ 0.61
PCDH17-202ENST00000484979 RARSP54136 660 aaKnown RBP18.84■□□□□ 0.61
PCDH17-202ENST00000484979 MAP3K12Q12852 859 aa18.84■□□□□ 0.61
PCDH17-202ENST00000484979 CAVIN1Q6NZI2 390 aaKnown RBP18.84■□□□□ 0.61
PCDH17-202ENST00000484979 FAM13BQ9NYF5 915 aa18.84■□□□□ 0.61
PCDH17-202ENST00000484979 PDRG1Q9NUG6 133 aa18.83■□□□□ 0.61
PCDH17-202ENST00000484979 ANKIB1Q9P2G1 1089 aa18.83■□□□□ 0.61
PCDH17-202ENST00000484979 K7ELQ4 463 aaPredicted RBP18.83■□□□□ 0.6
PCDH17-202ENST00000484979 MX1P20591 662 aa18.83■□□□□ 0.6
PCDH17-202ENST00000484979 CDR1P51861 262 aa18.83■□□□□ 0.6
PCDH17-202ENST00000484979 SMARCE1Q969G3 411 aa18.83■□□□□ 0.6
PCDH17-202ENST00000484979 PTPN23Q9H3S7 1636 aa18.83■□□□□ 0.6
PCDH17-202ENST00000484979 NASPP49321 788 aaPredicted RBP18.82■□□□□ 0.6
PCDH17-202ENST00000484979 SYCP1Q15431 976 aa18.82■□□□□ 0.6
PCDH17-202ENST00000484979 ANKRD18BA2A2Z9 1011 aa18.82■□□□□ 0.6
PCDH17-202ENST00000484979 TEX14Q8IWB6 1497 aa18.82■□□□□ 0.6
PCDH17-202ENST00000484979 NUTM1Q86Y26 1132 aa18.82■□□□□ 0.6
PCDH17-202ENST00000484979 ZHX3Q9H4I2 956 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms