RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 HTATSF1O43719 755 aaKnown RBP12.34□□□□□ -0.43
UFD1-208ENST00000484101 ZNF853P0CG23 659 aa12.34□□□□□ -0.43
UFD1-208ENST00000484101 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
UFD1-208ENST00000484101 ABTB2Q8N961 1025 aa12.34□□□□□ -0.43
UFD1-208ENST00000484101 GAS2L2Q8NHY3 880 aa12.34□□□□□ -0.43
UFD1-208ENST00000484101 CLUAP1Q96AJ1 413 aa12.34□□□□□ -0.43
UFD1-208ENST00000484101 SMC4Q9NTJ3 1288 aa12.34□□□□□ -0.43
UFD1-208ENST00000484101 ALS2Q96Q42 1657 aa12.34□□□□□ -0.43
UFD1-208ENST00000484101 C1orf167Q5SNV9 1468 aa12.34□□□□□ -0.43
UFD1-208ENST00000484101 PLEKHG2Q9H7P9 1386 aa12.33□□□□□ -0.44
UFD1-208ENST00000484101 CAMTA1Q9Y6Y1 1673 aa12.33□□□□□ -0.44
UFD1-208ENST00000484101 SULT6B1Q6IMI4 303 aa12.33□□□□□ -0.44
UFD1-208ENST00000484101 FTSJ3Q8IY81 847 aaKnown RBP12.33□□□□□ -0.44
UFD1-208ENST00000484101 PHACTR3Q96KR7 559 aa12.33□□□□□ -0.44
UFD1-208ENST00000484101 FAM208AQ9UK61 1670 aaKnown RBP12.32□□□□□ -0.44
UFD1-208ENST00000484101 KIAA0232Q92628 1395 aa12.32□□□□□ -0.44
UFD1-208ENST00000484101 FBLN1P23142 703 aa12.32□□□□□ -0.44
UFD1-208ENST00000484101 PSME1Q06323 249 aa12.32□□□□□ -0.44
UFD1-208ENST00000484101 HSP90AB2PQ58FF8 381 aa12.32□□□□□ -0.44
UFD1-208ENST00000484101 ESCO1Q5FWF5 840 aa12.32□□□□□ -0.44
UFD1-208ENST00000484101 DZIP1LQ8IYY4 767 aaKnown RBP12.32□□□□□ -0.44
UFD1-208ENST00000484101 ARHGAP45Q92619 1136 aa12.32□□□□□ -0.44
UFD1-208ENST00000484101 DDX17Q92841 729 aaKnown RBP12.32□□□□□ -0.44
UFD1-208ENST00000484101 TSR2Q969E8 191 aaKnown RBP12.32□□□□□ -0.44
UFD1-208ENST00000484101 SOS1Q07889 1333 aaPredicted RBP12.32□□□□□ -0.44
UFD1-208ENST00000484101 VIRMAQ69YN4 1812 aaKnown RBP12.32□□□□□ -0.44
UFD1-208ENST00000484101 CACNA1FO60840 1977 aa12.31□□□□□ -0.44
UFD1-208ENST00000484101 HOXC9P31274 260 aa12.31□□□□□ -0.44
UFD1-208ENST00000484101 SF3B2Q13435 895 aaKnown RBP12.31□□□□□ -0.44
UFD1-208ENST00000484101 MVPQ14764 893 aaKnown RBP12.31□□□□□ -0.44
UFD1-208ENST00000484101 ATF7IPQ6VMQ6 1270 aa12.31□□□□□ -0.44
UFD1-208ENST00000484101 FRAT1Q92837 279 aaPredicted RBP12.31□□□□□ -0.44
UFD1-208ENST00000484101 DDX19BQ9UMR2 479 aa12.31□□□□□ -0.44
UFD1-208ENST00000484101 PAK3O75914 559 aaPredicted RBP12.3□□□□□ -0.44
UFD1-208ENST00000484101 BABAM1Q9NWV8 329 aa12.3□□□□□ -0.44
UFD1-208ENST00000484101 USP19O94966 1318 aa12.3□□□□□ -0.44
UFD1-208ENST00000484101 NCAPD2Q15021 1401 aa12.29□□□□□ -0.44
UFD1-208ENST00000484101 SSH1Q8WYL5 1049 aa12.29□□□□□ -0.44
UFD1-208ENST00000484101 IP6K1Q92551 441 aa12.29□□□□□ -0.44
UFD1-208ENST00000484101 GJD4Q96KN9 370 aaPredicted RBP12.29□□□□□ -0.44
UFD1-208ENST00000484101 LMO7Q8WWI1 1683 aa12.29□□□□□ -0.44
UFD1-208ENST00000484101 BRWD3Q6RI45 1802 aa12.28□□□□□ -0.44
UFD1-208ENST00000484101 PANK1Q8TE04 598 aa12.28□□□□□ -0.44
UFD1-208ENST00000484101 RTF1Q92541 710 aaKnown RBP12.28□□□□□ -0.44
UFD1-208ENST00000484101 MBIPQ9NS73 344 aa12.28□□□□□ -0.44
UFD1-208ENST00000484101 COG6Q9Y2V7 657 aa12.28□□□□□ -0.44
UFD1-208ENST00000484101 OVOS2A0A0G2JMS6 1433 aa12.28□□□□□ -0.44
UFD1-208ENST00000484101 AEBP1Q8IUX7 1158 aa12.27□□□□□ -0.45
UFD1-208ENST00000484101 EYA1Q99502 592 aa12.27□□□□□ -0.45
UFD1-208ENST00000484101 CHMP4AQ9BY43 222 aa12.27□□□□□ -0.45
UFD1-208ENST00000484101 RWDD1Q9H446 243 aaPredicted RBP12.27□□□□□ -0.45
UFD1-208ENST00000484101 CRB1P82279 1406 aa12.27□□□□□ -0.45
UFD1-208ENST00000484101 CHL1O00533 1208 aa12.26□□□□□ -0.45
UFD1-208ENST00000484101 TRIM27P14373 513 aa12.26□□□□□ -0.45
UFD1-208ENST00000484101 TWISTNBQ3B726 338 aaPredicted RBP12.26□□□□□ -0.45
UFD1-208ENST00000484101 API5Q9BZZ5 524 aaKnown RBP12.26□□□□□ -0.45
UFD1-208ENST00000484101 NPHP3Q7Z494 1330 aa12.26□□□□□ -0.45
UFD1-208ENST00000484101 MAP3K5Q99683 1374 aa12.26□□□□□ -0.45
UFD1-208ENST00000484101 SOX12O15370 315 aa12.25□□□□□ -0.45
UFD1-208ENST00000484101 VAMP4O75379 141 aa12.25□□□□□ -0.45
UFD1-208ENST00000484101 R3HDM1Q15032 1099 aaKnown RBP12.25□□□□□ -0.45
UFD1-208ENST00000484101 LAS1LQ9Y4W2 734 aaKnown RBP12.25□□□□□ -0.45
UFD1-208ENST00000484101 GLI3P10071 1580 aa12.25□□□□□ -0.45
UFD1-208ENST00000484101 CRYBG1Q9Y4K1 1723 aa12.25□□□□□ -0.45
UFD1-208ENST00000484101 N4BP2Q86UW6 1770 aaPredicted RBP12.25□□□□□ -0.45
UFD1-208ENST00000484101 TNS3Q68CZ2 1445 aa12.24□□□□□ -0.45
UFD1-208ENST00000484101 ZNF784Q8NCA9 323 aaPredicted RBP12.24□□□□□ -0.45
UFD1-208ENST00000484101 BCL2L13Q9BXK5 485 aa12.24□□□□□ -0.45
UFD1-208ENST00000484101 NOB1Q9ULX3 412 aaKnown RBP12.24□□□□□ -0.45
UFD1-208ENST00000484101 ABCC4O15439 1325 aa12.23□□□□□ -0.45
UFD1-208ENST00000484101 PTPRCP08575 1304 aa12.23□□□□□ -0.45
UFD1-208ENST00000484101 GNAT3A8MTJ3 354 aa12.23□□□□□ -0.45
UFD1-208ENST00000484101 RLBP1P12271 317 aa12.23□□□□□ -0.45
UFD1-208ENST00000484101 ANP32AP39687 249 aaKnown RBP12.23□□□□□ -0.45
UFD1-208ENST00000484101 C1QTNF8P60827 252 aa12.23□□□□□ -0.45
UFD1-208ENST00000484101 HDAC1Q13547 482 aaPredicted RBP12.23□□□□□ -0.45
UFD1-208ENST00000484101 MRPL50Q8N5N7 158 aaKnown RBP12.23□□□□□ -0.45
UFD1-208ENST00000484101 GCP02774 474 aa12.22□□□□□ -0.45
UFD1-208ENST00000484101 BAG6P46379 1132 aa12.22□□□□□ -0.45
UFD1-208ENST00000484101 MTHFSDQ2M296 383 aaKnown RBP12.22□□□□□ -0.45
UFD1-208ENST00000484101 AMOTQ4VCS5 1084 aa12.22□□□□□ -0.45
UFD1-208ENST00000484101 KRT28Q7Z3Y7 464 aa12.22□□□□□ -0.45
UFD1-208ENST00000484101 ARHGEF25Q86VW2 580 aa12.22□□□□□ -0.45
UFD1-208ENST00000484101 ITPRIPQ8IWB1 547 aa12.22□□□□□ -0.45
UFD1-208ENST00000484101 THUMPD2Q9BTF0 503 aaKnown RBP12.22□□□□□ -0.45
UFD1-208ENST00000484101 BACH2Q9BYV9 841 aa12.22□□□□□ -0.45
UFD1-208ENST00000484101 KDM3BQ7LBC6 1761 aa12.22□□□□□ -0.45
UFD1-208ENST00000484101 COL22A1Q8NFW1 1626 aaPredicted RBP12.22□□□□□ -0.45
UFD1-208ENST00000484101 PXDNQ92626 1479 aa12.21□□□□□ -0.45
UFD1-208ENST00000484101 RGPD2P0DJD1 1756 aa12.21□□□□□ -0.45
UFD1-208ENST00000484101 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.21□□□□□ -0.45
UFD1-208ENST00000484101 FOXO3O43524 673 aa12.21□□□□□ -0.45
UFD1-208ENST00000484101 PDE4AP27815 886 aa12.21□□□□□ -0.45
UFD1-208ENST00000484101 NUTM2GQ5VZR2 741 aa12.21□□□□□ -0.45
UFD1-208ENST00000484101 ORAI2Q96SN7 254 aa12.21□□□□□ -0.45
UFD1-208ENST00000484101 ADAMTS7Q9UKP4 1686 aa12.21□□□□□ -0.45
UFD1-208ENST00000484101 SOS2Q07890 1332 aaPredicted RBP12.2□□□□□ -0.46
UFD1-208ENST00000484101 FAM83GA6ND36 823 aa12.2□□□□□ -0.46
UFD1-208ENST00000484101 FAM161AQ3B820 660 aa12.2□□□□□ -0.46
UFD1-208ENST00000484101 CEMIPQ8WUJ3 1361 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms