RNA–Protein interactions for RNA: ENST00000481603.1

TRIM6-207, Transcript of tripartite motif containing 6, humanhuman

TSL 2

Gene TRIM6, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-207ENST00000481603 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.3□□□□□ -1.08
TRIM6-207ENST00000481603 FTSJ3Q8IY81 847 aaKnown RBP8.3□□□□□ -1.08
TRIM6-207ENST00000481603 RIPK4P57078 832 aa8.29□□□□□ -1.08
TRIM6-207ENST00000481603 EXOSC9Q06265 439 aaKnown RBP8.29□□□□□ -1.08
TRIM6-207ENST00000481603 SMC4Q9NTJ3 1288 aa8.29□□□□□ -1.08
TRIM6-207ENST00000481603 PCDHB15Q9Y5E8 787 aa8.29□□□□□ -1.08
TRIM6-207ENST00000481603 WASLO00401 505 aaPredicted RBP8.29□□□□□ -1.08
TRIM6-207ENST00000481603 CCDC125Q86Z20 511 aa8.29□□□□□ -1.08
TRIM6-207ENST00000481603 PPM1GO15355 546 aaPredicted RBP8.28□□□□□ -1.08
TRIM6-207ENST00000481603 DZIP1LQ8IYY4 767 aaKnown RBP8.28□□□□□ -1.08
TRIM6-207ENST00000481603 FNBP4Q8N3X1 1017 aaPredicted RBP8.28□□□□□ -1.08
TRIM6-207ENST00000481603 C8orf37Q96NL8 207 aa8.28□□□□□ -1.08
TRIM6-207ENST00000481603 POLKQ9UBT6 870 aa8.28□□□□□ -1.08
TRIM6-207ENST00000481603 TRPC5Q9UL62 973 aaPredicted RBP8.28□□□□□ -1.08
TRIM6-207ENST00000481603 FCHSD2O94868 740 aa8.28□□□□□ -1.08
TRIM6-207ENST00000481603 TRIM27P14373 513 aa8.28□□□□□ -1.08
TRIM6-207ENST00000481603 AATKQ6ZMQ8 1374 aa8.28□□□□□ -1.08
TRIM6-207ENST00000481603 KIF16BQ96L93 1317 aa8.27□□□□□ -1.08
TRIM6-207ENST00000481603 NEFMP07197 916 aa8.27□□□□□ -1.09
TRIM6-207ENST00000481603 PRKAR2BP31323 418 aa8.27□□□□□ -1.09
TRIM6-207ENST00000481603 SSH1Q8WYL5 1049 aa8.27□□□□□ -1.09
TRIM6-207ENST00000481603 USP35Q9P2H5 1018 aa8.27□□□□□ -1.09
TRIM6-207ENST00000481603 IGSF3O75054 1194 aa8.27□□□□□ -1.09
TRIM6-207ENST00000481603 RWDD1Q9H446 243 aaPredicted RBP8.27□□□□□ -1.09
TRIM6-207ENST00000481603 FMN2Q9NZ56 1722 aa8.27□□□□□ -1.09
TRIM6-207ENST00000481603 HSP90B1P14625 803 aaKnown RBP8.26□□□□□ -1.09
TRIM6-207ENST00000481603 FBLN1P23142 703 aa8.26□□□□□ -1.09
TRIM6-207ENST00000481603 ATF7IPQ6VMQ6 1270 aa8.26□□□□□ -1.09
TRIM6-207ENST00000481603 NME9Q86XW9 330 aa8.26□□□□□ -1.09
TRIM6-207ENST00000481603 DDX19BQ9UMR2 479 aa8.26□□□□□ -1.09
TRIM6-207ENST00000481603 PXDNQ92626 1479 aa8.26□□□□□ -1.09
TRIM6-207ENST00000481603 USP19O94966 1318 aa8.26□□□□□ -1.09
TRIM6-207ENST00000481603 PDZRN3Q9UPQ7 1066 aa8.26□□□□□ -1.09
TRIM6-207ENST00000481603 EMILIN1Q9Y6C2 1016 aa8.26□□□□□ -1.09
TRIM6-207ENST00000481603 SLC4A3P48751 1232 aa8.25□□□□□ -1.09
TRIM6-207ENST00000481603 ITPRIPQ8IWB1 547 aa8.25□□□□□ -1.09
TRIM6-207ENST00000481603 NUDT16Q96DE0 195 aaKnown RBP8.25□□□□□ -1.09
TRIM6-207ENST00000481603 USP21Q9UK80 565 aa8.25□□□□□ -1.09
TRIM6-207ENST00000481603 LRP5O75197 1615 aa8.25□□□□□ -1.09
TRIM6-207ENST00000481603 RRP9O43818 475 aaKnown RBP8.25□□□□□ -1.09
TRIM6-207ENST00000481603 HMOX1P09601 288 aa8.25□□□□□ -1.09
TRIM6-207ENST00000481603 NFE2L2Q16236 605 aa8.25□□□□□ -1.09
TRIM6-207ENST00000481603 ALDH1L2Q3SY69 923 aa8.25□□□□□ -1.09
TRIM6-207ENST00000481603 SIRT1Q96EB6 747 aa8.25□□□□□ -1.09
TRIM6-207ENST00000481603 ZRANB1Q9UGI0 708 aa8.25□□□□□ -1.09
TRIM6-207ENST00000481603 NOB1Q9ULX3 412 aaKnown RBP8.25□□□□□ -1.09
TRIM6-207ENST00000481603 RGPD1P0DJD0 1748 aa8.25□□□□□ -1.09
TRIM6-207ENST00000481603 KIF1AQ12756 1690 aa8.25□□□□□ -1.09
TRIM6-207ENST00000481603 ROBO2Q9HCK4 1378 aa8.24□□□□□ -1.09
TRIM6-207ENST00000481603 BCL9LQ86UU0 1499 aa8.24□□□□□ -1.09
TRIM6-207ENST00000481603 IL13P35225 146 aa8.24□□□□□ -1.09
TRIM6-207ENST00000481603 CCDC61Q9Y6R9 512 aa8.24□□□□□ -1.09
TRIM6-207ENST00000481603 PEAK1Q9H792 1746 aa8.24□□□□□ -1.09
TRIM6-207ENST00000481603 PRR36Q9H6K5 1346 aa8.24□□□□□ -1.09
TRIM6-207ENST00000481603 HMGB1P09429 215 aaKnown RBP8.24□□□□□ -1.09
TRIM6-207ENST00000481603 TMEM57Q8N5G2 664 aa8.24□□□□□ -1.09
TRIM6-207ENST00000481603 COG3Q96JB2 828 aa8.24□□□□□ -1.09
TRIM6-207ENST00000481603 NPHP3Q7Z494 1330 aa8.23□□□□□ -1.09
TRIM6-207ENST00000481603 OVOS2A0A0J9YW53 1432 aa8.23□□□□□ -1.09
TRIM6-207ENST00000481603 SEC24BO95487 1268 aa8.23□□□□□ -1.09
TRIM6-207ENST00000481603 CALD1Q05682 793 aaKnown RBP8.23□□□□□ -1.09
TRIM6-207ENST00000481603 HDAC1Q13547 482 aaPredicted RBP8.23□□□□□ -1.09
TRIM6-207ENST00000481603 OVOS2Q6IE36 1432 aa8.23□□□□□ -1.09
TRIM6-207ENST00000481603 ZNF428Q96B54 188 aa8.23□□□□□ -1.09
TRIM6-207ENST00000481603 PHACTR3Q96KR7 559 aa8.23□□□□□ -1.09
TRIM6-207ENST00000481603 IPO8O15397 1037 aaKnown RBP8.23□□□□□ -1.09
TRIM6-207ENST00000481603 DDX17Q92841 729 aaKnown RBP8.23□□□□□ -1.09
TRIM6-207ENST00000481603 RGPD8O14715 1765 aaPredicted RBP8.22□□□□□ -1.09
TRIM6-207ENST00000481603 SLIT2O94813 1529 aa8.22□□□□□ -1.09
TRIM6-207ENST00000481603 ADAMTS2O95450 1211 aa8.22□□□□□ -1.09
TRIM6-207ENST00000481603 BRPF1P55201 1214 aaPredicted RBP8.22□□□□□ -1.09
TRIM6-207ENST00000481603 RRS1Q15050 365 aaKnown RBP8.22□□□□□ -1.09
TRIM6-207ENST00000481603 IFT57Q9NWB7 429 aa8.22□□□□□ -1.09
TRIM6-207ENST00000481603 THUMPD2Q9BTF0 503 aaKnown RBP8.22□□□□□ -1.09
TRIM6-207ENST00000481603 GLI3P10071 1580 aa8.22□□□□□ -1.09
TRIM6-207ENST00000481603 USP6P35125 1406 aa8.21□□□□□ -1.09
TRIM6-207ENST00000481603 NWD2Q9ULI1 1742 aa8.21□□□□□ -1.09
TRIM6-207ENST00000481603 GNAI1P63096 354 aa8.21□□□□□ -1.09
TRIM6-207ENST00000481603 LMOD3Q0VAK6 560 aa8.21□□□□□ -1.09
TRIM6-207ENST00000481603 NFKBIBQ15653 356 aa8.21□□□□□ -1.09
TRIM6-207ENST00000481603 ZNF692Q9BU19 519 aaPredicted RBP8.21□□□□□ -1.09
TRIM6-207ENST00000481603 UPF2Q9HAU5 1272 aaKnown RBP8.21□□□□□ -1.09
TRIM6-207ENST00000481603 ZBTB40Q9NUA8 1239 aa8.21□□□□□ -1.09
TRIM6-207ENST00000481603 PAXIP1Q6ZW49 1069 aaPredicted RBP8.21□□□□□ -1.1
TRIM6-207ENST00000481603 SMC5Q8IY18 1101 aa8.21□□□□□ -1.1
TRIM6-207ENST00000481603 FAM43AQ8N2R8 423 aa8.21□□□□□ -1.1
TRIM6-207ENST00000481603 ORAI2Q96SN7 254 aa8.21□□□□□ -1.1
TRIM6-207ENST00000481603 GJD4Q96KN9 370 aaPredicted RBP8.2□□□□□ -1.1
TRIM6-207ENST00000481603 TBC1D32Q96NH3 1257 aa8.2□□□□□ -1.1
TRIM6-207ENST00000481603 NAP1L5Q96NT1 182 aaPredicted RBP8.2□□□□□ -1.1
TRIM6-207ENST00000481603 MBIPQ9NS73 344 aa8.2□□□□□ -1.1
TRIM6-207ENST00000481603 NAP1L2Q9ULW6 460 aaPredicted RBP8.2□□□□□ -1.1
TRIM6-207ENST00000481603 VAMP4O75379 141 aa8.2□□□□□ -1.1
TRIM6-207ENST00000481603 ZNF853P0CG23 659 aa8.2□□□□□ -1.1
TRIM6-207ENST00000481603 BECN1Q14457 450 aa8.2□□□□□ -1.1
TRIM6-207ENST00000481603 HSP90AA2PQ14568 343 aaPredicted RBP8.2□□□□□ -1.1
TRIM6-207ENST00000481603 PIK3C2AO00443 1686 aa8.2□□□□□ -1.1
TRIM6-207ENST00000481603 MRPL50Q8N5N7 158 aaKnown RBP8.19□□□□□ -1.1
TRIM6-207ENST00000481603 TTC21BQ7Z4L5 1316 aa8.19□□□□□ -1.1
TRIM6-207ENST00000481603 TSPYL6Q8N831 410 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms