RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 PTPRCP08575 1304 aa13.72□□□□□ -0.21
DDX39B-219ENST00000481456 ERC1Q8IUD2 1116 aa13.72□□□□□ -0.21
DDX39B-219ENST00000481456 TMX3Q96JJ7 454 aa13.72□□□□□ -0.21
DDX39B-219ENST00000481456 DDX58O95786 925 aaKnown RBP13.72□□□□□ -0.21
DDX39B-219ENST00000481456 MAP4K4O95819 1239 aaPredicted RBP13.72□□□□□ -0.21
DDX39B-219ENST00000481456 SDSP20132 328 aa13.72□□□□□ -0.21
DDX39B-219ENST00000481456 C1orf141Q5JVX7 400 aa13.72□□□□□ -0.21
DDX39B-219ENST00000481456 FSD1Q9BTV5 496 aa13.72□□□□□ -0.21
DDX39B-219ENST00000481456 EID1Q9Y6B2 187 aa13.72□□□□□ -0.21
DDX39B-219ENST00000481456 MAGI2Q86UL8 1455 aa13.72□□□□□ -0.21
DDX39B-219ENST00000481456 CCP110O43303 1012 aa13.72□□□□□ -0.21
DDX39B-219ENST00000481456 NCBP3Q53F19 620 aaKnown RBP13.72□□□□□ -0.21
DDX39B-219ENST00000481456 TULP1O00294 542 aaPredicted RBP13.71□□□□□ -0.21
DDX39B-219ENST00000481456 SPATA32Q96LK8 384 aa13.71□□□□□ -0.21
DDX39B-219ENST00000481456 PPP6R1Q9UPN7 881 aa13.71□□□□□ -0.21
DDX39B-219ENST00000481456 ZNF445P59923 1031 aa13.71□□□□□ -0.21
DDX39B-219ENST00000481456 DHX8Q14562 1220 aaKnown RBP13.71□□□□□ -0.21
DDX39B-219ENST00000481456 ZNF692Q9BU19 519 aaPredicted RBP13.71□□□□□ -0.21
DDX39B-219ENST00000481456 PPP4R3BQ5MIZ7 849 aa13.71□□□□□ -0.21
DDX39B-219ENST00000481456 JAKMIP1Q96N16 626 aaKnown RBP13.71□□□□□ -0.21
DDX39B-219ENST00000481456 SDF4Q9BRK5 362 aa13.71□□□□□ -0.21
DDX39B-219ENST00000481456 RRS1Q15050 365 aaKnown RBP13.71□□□□□ -0.22
DDX39B-219ENST00000481456 CEP170Q5SW79 1584 aa13.7□□□□□ -0.22
DDX39B-219ENST00000481456 CASTP20810 708 aaKnown RBP13.7□□□□□ -0.22
DDX39B-219ENST00000481456 FOSBP53539 338 aa13.7□□□□□ -0.22
DDX39B-219ENST00000481456 GDPD2Q9HCC8 539 aa13.7□□□□□ -0.22
DDX39B-219ENST00000481456 SYNMO15061 1565 aa13.7□□□□□ -0.22
DDX39B-219ENST00000481456 EIF4G3O43432 1585 aaKnown RBP13.7□□□□□ -0.22
DDX39B-219ENST00000481456 NOLC1Q14978 699 aaKnown RBP eCLIP13.7□□□□□ -0.221e-323■■■■■ 32.2
DDX39B-219ENST00000481456 LRRFIP1Q32MZ4 808 aaKnown RBP13.7□□□□□ -0.22
DDX39B-219ENST00000481456 CWC27Q6UX04 472 aaKnown RBP13.7□□□□□ -0.22
DDX39B-219ENST00000481456 PUS7Q96PZ0 661 aaKnown RBP13.7□□□□□ -0.22
DDX39B-219ENST00000481456 IL1RAPL2Q9NP60 686 aa13.7□□□□□ -0.22
DDX39B-219ENST00000481456 CPLX1O14810 134 aa13.69□□□□□ -0.22
DDX39B-219ENST00000481456 UBE2HP62256 183 aa13.69□□□□□ -0.22
DDX39B-219ENST00000481456 DCTN1Q14203 1278 aa13.69□□□□□ -0.22
DDX39B-219ENST00000481456 ZNF396Q96N95 335 aaPredicted RBP13.69□□□□□ -0.22
DDX39B-219ENST00000481456 PLCH2O75038 1416 aa13.69□□□□□ -0.22
DDX39B-219ENST00000481456 ANKRD44Q8N8A2 993 aa13.69□□□□□ -0.22
DDX39B-219ENST00000481456 RBSNQ9H1K0 784 aa13.69□□□□□ -0.22
DDX39B-219ENST00000481456 RAB11FIP3O75154 756 aa13.68□□□□□ -0.22
DDX39B-219ENST00000481456 SMC2O95347 1197 aa13.68□□□□□ -0.22
DDX39B-219ENST00000481456 SH2B1Q9NRF2 756 aaPredicted RBP13.68□□□□□ -0.22
DDX39B-219ENST00000481456 LIMCH1Q9UPQ0 1083 aa13.68□□□□□ -0.22
DDX39B-219ENST00000481456 CCDC9Q9Y3X0 531 aaKnown RBP13.68□□□□□ -0.22
DDX39B-219ENST00000481456 POLR1AO95602 1720 aaPredicted RBP13.68□□□□□ -0.22
DDX39B-219ENST00000481456 ARHGEF5Q12774 1597 aa13.68□□□□□ -0.22
DDX39B-219ENST00000481456 TPM1P09493 284 aa13.68□□□□□ -0.22
DDX39B-219ENST00000481456 CCDC94Q9BW85 323 aaPredicted RBP13.68□□□□□ -0.22
DDX39B-219ENST00000481456 CGNQ9P2M7 1197 aaKnown RBP13.68□□□□□ -0.22
DDX39B-219ENST00000481456 HOOK1Q9UJC3 728 aaKnown RBP13.68□□□□□ -0.22
DDX39B-219ENST00000481456 KDM5AP29375 1690 aaKnown RBP13.68□□□□□ -0.22
DDX39B-219ENST00000481456 PRDM15P57071 1507 aaPredicted RBP13.68□□□□□ -0.22
DDX39B-219ENST00000481456 ADGRL1O94910 1474 aa13.68□□□□□ -0.22
DDX39B-219ENST00000481456 CCDC83Q8IWF9 413 aa13.68□□□□□ -0.22
DDX39B-219ENST00000481456 HDGFL1Q5TGJ6 251 aa13.68□□□□□ -0.22
DDX39B-219ENST00000481456 CPLX2Q6PUV4 134 aaKnown RBP13.68□□□□□ -0.22
DDX39B-219ENST00000481456 SYNE3Q6ZMZ3 975 aa13.68□□□□□ -0.22
DDX39B-219ENST00000481456 NUTM1Q86Y26 1132 aa13.68□□□□□ -0.22
DDX39B-219ENST00000481456 USP26Q9BXU7 913 aa13.68□□□□□ -0.22
DDX39B-219ENST00000481456 DCTPP1Q9H773 170 aa13.68□□□□□ -0.22
DDX39B-219ENST00000481456 ANAPC15P60006 121 aa13.67□□□□□ -0.22
DDX39B-219ENST00000481456 PLEKHM2Q8IWE5 1019 aa13.67□□□□□ -0.22
DDX39B-219ENST00000481456 PPP1R9BQ96SB3 815 aa13.67□□□□□ -0.22
DDX39B-219ENST00000481456 ZHX1Q9UKY1 873 aaPredicted RBP13.67□□□□□ -0.22
DDX39B-219ENST00000481456 STX6O43752 255 aa13.67□□□□□ -0.22
DDX39B-219ENST00000481456 TAF7LQ5H9L4 462 aa13.67□□□□□ -0.22
DDX39B-219ENST00000481456 MCM10Q7L590 875 aa13.67□□□□□ -0.22
DDX39B-219ENST00000481456 EMILIN1Q9Y6C2 1016 aa13.67□□□□□ -0.22
DDX39B-219ENST00000481456 SRGAP3O43295 1099 aa13.67□□□□□ -0.22
DDX39B-219ENST00000481456 CAMK4Q16566 473 aa13.67□□□□□ -0.22
DDX39B-219ENST00000481456 BLOC1S2Q6QNY1 142 aa13.67□□□□□ -0.22
DDX39B-219ENST00000481456 CWC15Q9P013 229 aaKnown RBP13.67□□□□□ -0.22
DDX39B-219ENST00000481456 KDM5DQ9BY66 1539 aa13.67□□□□□ -0.22
DDX39B-219ENST00000481456 ZBTB7BO15156 539 aaPredicted RBP13.66□□□□□ -0.22
DDX39B-219ENST00000481456 ZGPATQ8N5A5 531 aaKnown RBP13.66□□□□□ -0.22
DDX39B-219ENST00000481456 HCLS1P14317 486 aaPredicted RBP13.66□□□□□ -0.22
DDX39B-219ENST00000481456 CFAP45Q9UL16 551 aa13.66□□□□□ -0.22
DDX39B-219ENST00000481456 TRIM29Q14134 588 aa13.66□□□□□ -0.22
DDX39B-219ENST00000481456 SMAP1Q8IYB5 467 aaPredicted RBP13.66□□□□□ -0.22
DDX39B-219ENST00000481456 SCAND2PQ9GZW5 306 aaPredicted RBP13.66□□□□□ -0.22
DDX39B-219ENST00000481456 USP48Q86UV5 1035 aa13.66□□□□□ -0.22
DDX39B-219ENST00000481456 STK3Q13188 491 aa13.65□□□□□ -0.22
DDX39B-219ENST00000481456 USP19O94966 1318 aa13.65□□□□□ -0.22
DDX39B-219ENST00000481456 FYB1O15117 783 aa13.65□□□□□ -0.22
DDX39B-219ENST00000481456 VAMP4O75379 141 aa13.65□□□□□ -0.22
DDX39B-219ENST00000481456 CEBPZQ03701 1054 aaKnown RBP13.65□□□□□ -0.22
DDX39B-219ENST00000481456 KIF1BPQ96EK5 621 aa13.65□□□□□ -0.22
DDX39B-219ENST00000481456 KIF2AO00139 706 aaPredicted RBP13.65□□□□□ -0.22
DDX39B-219ENST00000481456 OLFM4Q6UX06 510 aa13.65□□□□□ -0.22
DDX39B-219ENST00000481456 ZNF830Q96NB3 372 aaPredicted RBP13.65□□□□□ -0.22
DDX39B-219ENST00000481456 TNNT1P13805 278 aa13.64□□□□□ -0.23
DDX39B-219ENST00000481456 NOM1Q5C9Z4 860 aaKnown RBP13.64□□□□□ -0.23
DDX39B-219ENST00000481456 ESYT1Q9BSJ8 1104 aa13.64□□□□□ -0.23
DDX39B-219ENST00000481456 WDR7Q9Y4E6 1490 aa13.64□□□□□ -0.23
DDX39B-219ENST00000481456 ZSCAN22P10073 491 aaPredicted RBP13.64□□□□□ -0.23
DDX39B-219ENST00000481456 PDE1AP54750 535 aa13.64□□□□□ -0.23
DDX39B-219ENST00000481456 C16orf71Q8IYS4 520 aaPredicted RBP13.64□□□□□ -0.23
DDX39B-219ENST00000481456 CEP57L1Q8IYX8 460 aa13.64□□□□□ -0.23
DDX39B-219ENST00000481456 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms