RNA–Protein interactions for RNA: ENST00000480342.5

RERE-213, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-213ENST00000480342 DDX49Q9Y6V7 483 aaKnown RBP12.33□□□□□ -0.44
RERE-213ENST00000480342 KIF16BQ96L93 1317 aa12.33□□□□□ -0.44
RERE-213ENST00000480342 PRR36Q9H6K5 1346 aa12.33□□□□□ -0.44
RERE-213ENST00000480342 MST1RQ04912 1400 aa12.32□□□□□ -0.44
RERE-213ENST00000480342 K7ELQ4 463 aaPredicted RBP12.32□□□□□ -0.44
RERE-213ENST00000480342 BMP2KLQ5H9B9 411 aa12.32□□□□□ -0.44
RERE-213ENST00000480342 SLC26A8Q96RN1 970 aa12.32□□□□□ -0.44
RERE-213ENST00000480342 PIK3C2AO00443 1686 aa12.32□□□□□ -0.44
RERE-213ENST00000480342 MARF1Q9Y4F3 1742 aaKnown RBP12.32□□□□□ -0.44
RERE-213ENST00000480342 DIAPH1O60610 1272 aaKnown RBP12.31□□□□□ -0.44
RERE-213ENST00000480342 HMOX1P09601 288 aa12.31□□□□□ -0.44
RERE-213ENST00000480342 NASPP49321 788 aaPredicted RBP12.31□□□□□ -0.44
RERE-213ENST00000480342 SKOR2Q2VWA4 1001 aaPredicted RBP12.31□□□□□ -0.44
RERE-213ENST00000480342 TSPYL6Q8N831 410 aa12.31□□□□□ -0.44
RERE-213ENST00000480342 RGPD1P0DJD0 1748 aa12.3□□□□□ -0.44
RERE-213ENST00000480342 LMTK3Q96Q04 1460 aa12.3□□□□□ -0.44
RERE-213ENST00000480342 APBB1O00213 710 aa12.3□□□□□ -0.44
RERE-213ENST00000480342 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.3□□□□□ -0.441e-6■■□□□ 11.6
RERE-213ENST00000480342 CIZ1Q9ULV3 898 aaPredicted RBP12.3□□□□□ -0.44
RERE-213ENST00000480342 GOLGA6L22H0YM25 854 aa12.3□□□□□ -0.44
RERE-213ENST00000480342 ZBTB7BO15156 539 aaPredicted RBP12.3□□□□□ -0.44
RERE-213ENST00000480342 RRP9O43818 475 aaKnown RBP12.3□□□□□ -0.44
RERE-213ENST00000480342 PRKAR2BP31323 418 aa12.3□□□□□ -0.44
RERE-213ENST00000480342 MCTP1Q6DN14 999 aa12.3□□□□□ -0.44
RERE-213ENST00000480342 ZMYND15Q9H091 742 aa12.3□□□□□ -0.44
RERE-213ENST00000480342 ANP32BQ92688 251 aaKnown RBP12.29□□□□□ -0.44
RERE-213ENST00000480342 COG3Q96JB2 828 aa12.29□□□□□ -0.44
RERE-213ENST00000480342 ISY1Q9ULR0 285 aaKnown RBP12.29□□□□□ -0.44
RERE-213ENST00000480342 TTC21BQ7Z4L5 1316 aa12.28□□□□□ -0.44
RERE-213ENST00000480342 SIRT2Q8IXJ6 389 aa12.28□□□□□ -0.44
RERE-213ENST00000480342 PKNOX2Q96KN3 472 aa12.28□□□□□ -0.44
RERE-213ENST00000480342 BAG4O95429 457 aaKnown RBP12.28□□□□□ -0.44
RERE-213ENST00000480342 CAVIN1Q6NZI2 390 aaKnown RBP12.28□□□□□ -0.44
RERE-213ENST00000480342 KIAA1211Q6ZU35 1233 aa12.28□□□□□ -0.44
RERE-213ENST00000480342 PHACTR3Q96KR7 559 aa12.28□□□□□ -0.44
RERE-213ENST00000480342 ACEP12821 1306 aa12.27□□□□□ -0.44
RERE-213ENST00000480342 PKP1Q13835 747 aa12.27□□□□□ -0.44
RERE-213ENST00000480342 C16orf71Q8IYS4 520 aaPredicted RBP12.27□□□□□ -0.44
RERE-213ENST00000480342 AK9Q5TCS8 1911 aa12.27□□□□□ -0.44
RERE-213ENST00000480342 ABCC6O95255 1503 aa12.27□□□□□ -0.44
RERE-213ENST00000480342 TRPM3Q9HCF6 1732 aaPredicted RBP12.27□□□□□ -0.45
RERE-213ENST00000480342 PLPPR3Q6T4P5 718 aa12.27□□□□□ -0.45
RERE-213ENST00000480342 GCC1Q96CN9 775 aa12.27□□□□□ -0.45
RERE-213ENST00000480342 RTL1A6NKG5 1358 aa12.27□□□□□ -0.45
RERE-213ENST00000480342 IL16Q14005 1332 aa12.26□□□□□ -0.45
RERE-213ENST00000480342 ALDH1L2Q3SY69 923 aa12.26□□□□□ -0.45
RERE-213ENST00000480342 FOXD4L5Q5VV16 416 aaPredicted RBP12.26□□□□□ -0.45
RERE-213ENST00000480342 FOXD4L4Q8WXT5 416 aaPredicted RBP12.26□□□□□ -0.45
RERE-213ENST00000480342 CHAMP1Q96JM3 812 aa12.26□□□□□ -0.45
RERE-213ENST00000480342 STRCQ7RTU9 1775 aa12.26□□□□□ -0.45
RERE-213ENST00000480342 VAMP4O75379 141 aa12.25□□□□□ -0.45
RERE-213ENST00000480342 MSNP26038 577 aaKnown RBP12.25□□□□□ -0.45
RERE-213ENST00000480342 RBM10P98175 930 aaKnown RBP12.25□□□□□ -0.45
RERE-213ENST00000480342 CCDC173Q0VFZ6 552 aa12.25□□□□□ -0.45
RERE-213ENST00000480342 CDC45O75419 566 aa12.25□□□□□ -0.45
RERE-213ENST00000480342 GSPT1P15170 499 aaKnown RBP12.25□□□□□ -0.45
RERE-213ENST00000480342 MRPL50Q8N5N7 158 aaKnown RBP12.25□□□□□ -0.45
RERE-213ENST00000480342 STRCP1A6NGW2 1772 aa12.24□□□□□ -0.45
RERE-213ENST00000480342 FCHSD2O94868 740 aa12.24□□□□□ -0.45
RERE-213ENST00000480342 CALD1Q05682 793 aaKnown RBP12.24□□□□□ -0.45
RERE-213ENST00000480342 KLHL40Q2TBA0 621 aa12.24□□□□□ -0.45
RERE-213ENST00000480342 SLIT3O75094 1523 aa12.24□□□□□ -0.45
RERE-213ENST00000480342 ZSCAN30Q86W11 494 aa12.24□□□□□ -0.45
RERE-213ENST00000480342 OTUD7AQ8TE49 926 aaPredicted RBP12.24□□□□□ -0.45
RERE-213ENST00000480342 PEAK1Q9H792 1746 aa12.23□□□□□ -0.45
RERE-213ENST00000480342 ZBTB7CA1YPR0 619 aa12.23□□□□□ -0.45
RERE-213ENST00000480342 PRPF40AO75400 957 aaKnown RBP12.23□□□□□ -0.45
RERE-213ENST00000480342 PTMSP20962 102 aa12.23□□□□□ -0.45
RERE-213ENST00000480342 ARID3AQ99856 593 aa12.23□□□□□ -0.45
RERE-213ENST00000480342 RBM27Q9P2N5 1060 aaKnown RBP12.23□□□□□ -0.45
RERE-213ENST00000480342 FAM83GA6ND36 823 aa12.23□□□□□ -0.45
RERE-213ENST00000480342 DCTN1Q14203 1278 aa12.23□□□□□ -0.45
RERE-213ENST00000480342 MBIPQ9NS73 344 aa12.23□□□□□ -0.45
RERE-213ENST00000480342 POLKQ9UBT6 870 aa12.23□□□□□ -0.45
RERE-213ENST00000480342 ALS2Q96Q42 1657 aa12.22□□□□□ -0.45
RERE-213ENST00000480342 SBNO1A3KN83 1393 aa12.22□□□□□ -0.45
RERE-213ENST00000480342 PLEKHG2Q9H7P9 1386 aa12.22□□□□□ -0.45
RERE-213ENST00000480342 SMARCA5O60264 1052 aaPredicted RBP12.22□□□□□ -0.45
RERE-213ENST00000480342 TWISTNBQ3B726 338 aaPredicted RBP12.22□□□□□ -0.45
RERE-213ENST00000480342 ZSCAN23Q3MJ62 389 aa12.22□□□□□ -0.45
RERE-213ENST00000480342 PLEKHM2Q8IWE5 1019 aa12.22□□□□□ -0.45
RERE-213ENST00000480342 ZGPATQ8N5A5 531 aaKnown RBP12.22□□□□□ -0.45
RERE-213ENST00000480342 C8orf58Q8NAV2 365 aa12.22□□□□□ -0.45
RERE-213ENST00000480342 XIRP1Q702N8 1843 aaKnown RBP12.22□□□□□ -0.45
RERE-213ENST00000480342 ARHGEF10O15013 1369 aa12.21□□□□□ -0.45
RERE-213ENST00000480342 PPP1R9BQ96SB3 815 aa12.21□□□□□ -0.45
RERE-213ENST00000480342 RBSNQ9H1K0 784 aa12.21□□□□□ -0.45
RERE-213ENST00000480342 R3HCC1Q9Y3T6 440 aaKnown RBP12.21□□□□□ -0.45
RERE-213ENST00000480342 MED1Q15648 1581 aaPredicted RBP12.21□□□□□ -0.46
RERE-213ENST00000480342 PRIM1P49642 420 aaKnown RBP12.21□□□□□ -0.46
RERE-213ENST00000480342 LTN1O94822 1766 aa12.21□□□□□ -0.46
RERE-213ENST00000480342 FLT4P35916 1363 aa12.2□□□□□ -0.46
RERE-213ENST00000480342 TPM2P07951 284 aa12.2□□□□□ -0.46
RERE-213ENST00000480342 XPCQ01831 940 aaPredicted RBP12.2□□□□□ -0.46
RERE-213ENST00000480342 EMILIN1Q9Y6C2 1016 aa12.2□□□□□ -0.46
RERE-213ENST00000480342 FAM208AQ9UK61 1670 aaKnown RBP12.2□□□□□ -0.46
RERE-213ENST00000480342 CAMTA1Q9Y6Y1 1673 aa12.2□□□□□ -0.46
RERE-213ENST00000480342 RABEP1Q15276 862 aa12.2□□□□□ -0.46
RERE-213ENST00000480342 NFE2L2Q16236 605 aa12.2□□□□□ -0.46
RERE-213ENST00000480342 NME9Q86XW9 330 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms