RNA–Protein interactions for RNA: ENST00000479535.2

SYCE1-205, Transcript of synaptonemal complex central element protein 1, humanhuman

TSL 5

Gene SYCE1, Length 2,479 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1-205ENST00000479535 RTF1Q92541 710 aaKnown RBP16.9■□□□□ 0.3
SYCE1-205ENST00000479535 PHF8Q9UPP1 1060 aa16.9■□□□□ 0.3
SYCE1-205ENST00000479535 C14orf37Q86TY3 774 aa16.9■□□□□ 0.3
SYCE1-205ENST00000479535 CHD1LQ86WJ1 897 aa16.9■□□□□ 0.3
SYCE1-205ENST00000479535 UPF2Q9HAU5 1272 aaKnown RBP16.9■□□□□ 0.3
SYCE1-205ENST00000479535 HAP1P54257 671 aaPredicted RBP16.89■□□□□ 0.29
SYCE1-205ENST00000479535 TBC1D32Q96NH3 1257 aa16.89■□□□□ 0.29
SYCE1-205ENST00000479535 ZNF142P52746 1687 aaPredicted RBP16.89■□□□□ 0.29
SYCE1-205ENST00000479535 GAS2L2Q8NHY3 880 aa16.88■□□□□ 0.29
SYCE1-205ENST00000479535 KIF24Q5T7B8 1368 aa16.88■□□□□ 0.29
SYCE1-205ENST00000479535 DEKP35659 375 aaKnown RBP16.88■□□□□ 0.29
SYCE1-205ENST00000479535 GCC1Q96CN9 775 aa16.88■□□□□ 0.29
SYCE1-205ENST00000479535 TSPYL4Q9UJ04 414 aa16.88■□□□□ 0.29
SYCE1-205ENST00000479535 RGS12O14924 1447 aa16.87■□□□□ 0.29
SYCE1-205ENST00000479535 LTV1Q96GA3 475 aaPredicted RBP16.87■□□□□ 0.29
SYCE1-205ENST00000479535 ANKRD45Q5TZF3 282 aa16.87■□□□□ 0.29
SYCE1-205ENST00000479535 INTS3Q68E01 1043 aaKnown RBP16.87■□□□□ 0.29
SYCE1-205ENST00000479535 USP54Q70EL1 1684 aa16.87■□□□□ 0.29
SYCE1-205ENST00000479535 NWD1Q149M9 1564 aa16.86■□□□□ 0.29
SYCE1-205ENST00000479535 ADAMTSL3P82987 1691 aa16.86■□□□□ 0.29
SYCE1-205ENST00000479535 USP35Q9P2H5 1018 aa16.85■□□□□ 0.29
SYCE1-205ENST00000479535 ESCO1Q5FWF5 840 aa16.85■□□□□ 0.29
SYCE1-205ENST00000479535 ADGRL3Q9HAR2 1447 aa16.84■□□□□ 0.29
SYCE1-205ENST00000479535 SLC4A2P04920 1241 aa16.84■□□□□ 0.29
SYCE1-205ENST00000479535 MFAP1P55081 439 aaKnown RBP16.84■□□□□ 0.29
SYCE1-205ENST00000479535 PTPRCP08575 1304 aa16.83■□□□□ 0.29
SYCE1-205ENST00000479535 GNAT3A8MTJ3 354 aa16.83■□□□□ 0.28
SYCE1-205ENST00000479535 HTATSF1O43719 755 aaKnown RBP16.82■□□□□ 0.28
SYCE1-205ENST00000479535 PSME1Q06323 249 aa16.82■□□□□ 0.28
SYCE1-205ENST00000479535 USHBP1Q8N6Y0 703 aa16.82■□□□□ 0.28
SYCE1-205ENST00000479535 BECN1Q14457 450 aa16.82■□□□□ 0.28
SYCE1-205ENST00000479535 NFKBIBQ15653 356 aa16.82■□□□□ 0.28
SYCE1-205ENST00000479535 NPHP4O75161 1426 aaPredicted RBP16.82■□□□□ 0.28
SYCE1-205ENST00000479535 MSH6P52701 1360 aa16.81■□□□□ 0.28
SYCE1-205ENST00000479535 RTL1A6NKG5 1358 aa16.81■□□□□ 0.28
SYCE1-205ENST00000479535 G2E3Q7L622 706 aa16.81■□□□□ 0.28
SYCE1-205ENST00000479535 C22orf23Q9BZE7 217 aa16.81■□□□□ 0.28
SYCE1-205ENST00000479535 IL17REQ8NFR9 667 aa16.8■□□□□ 0.28
SYCE1-205ENST00000479535 IP6K1Q92551 441 aa16.8■□□□□ 0.28
SYCE1-205ENST00000479535 ATP10DQ9P241 1426 aa16.8■□□□□ 0.28
SYCE1-205ENST00000479535 MAP3K5Q99683 1374 aa16.8■□□□□ 0.28
SYCE1-205ENST00000479535 LRRC37A3O60309 1634 aa16.79■□□□□ 0.28
SYCE1-205ENST00000479535 BMP2KLQ5H9B9 411 aa16.79■□□□□ 0.28
SYCE1-205ENST00000479535 NFAT5O94916 1531 aa16.79■□□□□ 0.28
SYCE1-205ENST00000479535 ORAI2Q96SN7 254 aa16.79■□□□□ 0.28
SYCE1-205ENST00000479535 MEIS3Q99687 375 aa16.79■□□□□ 0.28
SYCE1-205ENST00000479535 LTN1O94822 1766 aa16.79■□□□□ 0.28
SYCE1-205ENST00000479535 SETD1BQ9UPS6 1966 aaKnown RBP16.79■□□□□ 0.28
SYCE1-205ENST00000479535 ANKRD44Q8N8A2 993 aa16.78■□□□□ 0.28
SYCE1-205ENST00000479535 TBC1D2Q9BYX2 928 aa16.78■□□□□ 0.28
SYCE1-205ENST00000479535 DCTPP1Q9H773 170 aa16.78■□□□□ 0.28
SYCE1-205ENST00000479535 ZBTB7CA1YPR0 619 aa16.77■□□□□ 0.28
SYCE1-205ENST00000479535 F6X3S4 739 aa16.77■□□□□ 0.28
SYCE1-205ENST00000479535 XPCQ01831 940 aaPredicted RBP16.77■□□□□ 0.28
SYCE1-205ENST00000479535 NBPF6Q5VWK0 638 aa16.77■□□□□ 0.28
SYCE1-205ENST00000479535 CEP85Q6P2H3 762 aa16.77■□□□□ 0.28
SYCE1-205ENST00000479535 NBPF4Q96M43 638 aa16.77■□□□□ 0.28
SYCE1-205ENST00000479535 SLC4A10Q6U841 1118 aa16.76■□□□□ 0.27
SYCE1-205ENST00000479535 KCNH5Q8NCM2 988 aa16.76■□□□□ 0.27
SYCE1-205ENST00000479535 RPAP2Q8IXW5 612 aaPredicted RBP16.76■□□□□ 0.27
SYCE1-205ENST00000479535 TAF7Q15545 349 aaPredicted RBP16.75■□□□□ 0.27
SYCE1-205ENST00000479535 STK31Q9BXU1 1019 aa16.75■□□□□ 0.27
SYCE1-205ENST00000479535 PLEKHG5O94827 1062 aa16.75■□□□□ 0.27
SYCE1-205ENST00000479535 NECTIN2Q92692 538 aa16.75■□□□□ 0.27
SYCE1-205ENST00000479535 SLKQ9H2G2 1235 aaPredicted RBP16.75■□□□□ 0.27
SYCE1-205ENST00000479535 CCDC30Q5VVM6 783 aa16.74■□□□□ 0.27
SYCE1-205ENST00000479535 BCL11AQ9H165 835 aa16.74■□□□□ 0.27
SYCE1-205ENST00000479535 FRAT2O75474 233 aaPredicted RBP16.73■□□□□ 0.27
SYCE1-205ENST00000479535 CCT4P50991 539 aaKnown RBP16.73■□□□□ 0.27
SYCE1-205ENST00000479535 FLIIQ13045 1269 aa16.73■□□□□ 0.27
SYCE1-205ENST00000479535 PLEKHM2Q8IWE5 1019 aa16.73■□□□□ 0.27
SYCE1-205ENST00000479535 LRRC59Q96AG4 307 aaKnown RBP16.73■□□□□ 0.27
SYCE1-205ENST00000479535 GCP02774 474 aa16.72■□□□□ 0.27
SYCE1-205ENST00000479535 C16orf71Q8IYS4 520 aaPredicted RBP16.72■□□□□ 0.27
SYCE1-205ENST00000479535 GSPT1P15170 499 aaKnown RBP16.72■□□□□ 0.27
SYCE1-205ENST00000479535 BABAM1Q9NWV8 329 aa16.72■□□□□ 0.27
SYCE1-205ENST00000479535 RBM25P49756 843 aaKnown RBP16.71■□□□□ 0.27
SYCE1-205ENST00000479535 LMOD2Q6P5Q4 547 aa16.71■□□□□ 0.27
SYCE1-205ENST00000479535 TBC1D9Q6ZT07 1266 aa16.71■□□□□ 0.27
SYCE1-205ENST00000479535 ANTXR1Q9H6X2 564 aa16.71■□□□□ 0.27
SYCE1-205ENST00000479535 CEMIPQ8WUJ3 1361 aa16.71■□□□□ 0.27
SYCE1-205ENST00000479535 FKBP5Q13451 457 aaPredicted RBP16.71■□□□□ 0.26
SYCE1-205ENST00000479535 PROSER2Q86WR7 435 aaPredicted RBP16.71■□□□□ 0.26
SYCE1-205ENST00000479535 LGR6Q9HBX8 967 aa16.71■□□□□ 0.26
SYCE1-205ENST00000479535 FAM208AQ9UK61 1670 aaKnown RBP16.7■□□□□ 0.26
SYCE1-205ENST00000479535 ARHGEF25Q86VW2 580 aa16.7■□□□□ 0.26
SYCE1-205ENST00000479535 APBB1O00213 710 aa16.7■□□□□ 0.26
SYCE1-205ENST00000479535 OTUD7AQ8TE49 926 aaPredicted RBP16.7■□□□□ 0.26
SYCE1-205ENST00000479535 PHRF1Q9P1Y6 1649 aaKnown RBP16.69■□□□□ 0.26
SYCE1-205ENST00000479535 SMARCA5O60264 1052 aaPredicted RBP16.69■□□□□ 0.26
SYCE1-205ENST00000479535 SOS1Q07889 1333 aaPredicted RBP16.69■□□□□ 0.26
SYCE1-205ENST00000479535 SPRYD3Q8NCJ5 442 aa16.69■□□□□ 0.26
SYCE1-205ENST00000479535 RGPD2P0DJD1 1756 aa16.69■□□□□ 0.26
SYCE1-205ENST00000479535 SLIT3O75094 1523 aa16.68■□□□□ 0.26
SYCE1-205ENST00000479535 KRT28Q7Z3Y7 464 aa16.68■□□□□ 0.26
SYCE1-205ENST00000479535 TTC22Q5TAA0 569 aa16.67■□□□□ 0.26
SYCE1-205ENST00000479535 HDGFL1Q5TGJ6 251 aa16.67■□□□□ 0.26
SYCE1-205ENST00000479535 CDC45O75419 566 aa16.67■□□□□ 0.26
SYCE1-205ENST00000479535 GNAI2P04899 355 aa16.67■□□□□ 0.26
SYCE1-205ENST00000479535 C1orf167Q5SNV9 1468 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms