RNA–Protein interactions for RNA: ENST00000478139.1

SYCP3-204, Transcript of synaptonemal complex protein 3, humanhuman

TSL 2

Gene SYCP3, Length 3,690 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-204ENST00000478139 FCHSD2O94868 740 aa9.73□□□□□ -0.85
SYCP3-204ENST00000478139 EIF4A2Q14240 407 aaKnown RBP9.73□□□□□ -0.85
SYCP3-204ENST00000478139 WDR17Q8IZU2 1322 aa9.72□□□□□ -0.85
SYCP3-204ENST00000478139 PTCD1O75127 700 aaKnown RBP9.72□□□□□ -0.85
SYCP3-204ENST00000478139 NGEFQ8N5V2 710 aa9.72□□□□□ -0.85
SYCP3-204ENST00000478139 MYH16Q9H6N6 1097 aa9.72□□□□□ -0.85
SYCP3-204ENST00000478139 TSPYL4Q9UJ04 414 aa9.72□□□□□ -0.85
SYCP3-204ENST00000478139 ADAMTS8Q9UP79 889 aa9.72□□□□□ -0.85
SYCP3-204ENST00000478139 POLR3AO14802 1390 aaPredicted RBP9.72□□□□□ -0.85
SYCP3-204ENST00000478139 IQSEC2Q5JU85 1478 aa9.72□□□□□ -0.85
SYCP3-204ENST00000478139 EIF2S2P20042 333 aaKnown RBP9.71□□□□□ -0.85
SYCP3-204ENST00000478139 SMARCC1Q92922 1105 aaPredicted RBP9.71□□□□□ -0.85
SYCP3-204ENST00000478139 EYA1Q99502 592 aa9.71□□□□□ -0.85
SYCP3-204ENST00000478139 TMX4Q9H1E5 349 aaPredicted RBP9.71□□□□□ -0.85
SYCP3-204ENST00000478139 VPS72Q15906 364 aa9.71□□□□□ -0.85
SYCP3-204ENST00000478139 GNAT3A8MTJ3 354 aa9.71□□□□□ -0.86
SYCP3-204ENST00000478139 THRAP3Q9Y2W1 955 aaKnown RBP9.71□□□□□ -0.86
SYCP3-204ENST00000478139 FAM182BQ5T319 152 aa9.7□□□□□ -0.86
SYCP3-204ENST00000478139 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.7□□□□□ -0.86
SYCP3-204ENST00000478139 ZBTB22O15209 634 aa9.7□□□□□ -0.86
SYCP3-204ENST00000478139 GOLGA2Q08379 1002 aa9.7□□□□□ -0.86
SYCP3-204ENST00000478139 ELL2O00472 640 aaPredicted RBP9.7□□□□□ -0.86
SYCP3-204ENST00000478139 ADGRB1O14514 1584 aa9.7□□□□□ -0.86
SYCP3-204ENST00000478139 PCDH11XQ9BZA7 1347 aa9.69□□□□□ -0.86
SYCP3-204ENST00000478139 PCDH11YQ9BZA8 1340 aa9.69□□□□□ -0.86
SYCP3-204ENST00000478139 TRIM37O94972 964 aa9.69□□□□□ -0.86
SYCP3-204ENST00000478139 NBPF6Q5VWK0 638 aa9.69□□□□□ -0.86
SYCP3-204ENST00000478139 AK7Q96M32 723 aa9.69□□□□□ -0.86
SYCP3-204ENST00000478139 NBPF4Q96M43 638 aa9.69□□□□□ -0.86
SYCP3-204ENST00000478139 CDC42BPGQ6DT37 1551 aa9.69□□□□□ -0.86
SYCP3-204ENST00000478139 ERBB3P21860 1342 aa9.69□□□□□ -0.86
SYCP3-204ENST00000478139 STK32BQ9NY57 414 aa9.68□□□□□ -0.86
SYCP3-204ENST00000478139 AATKQ6ZMQ8 1374 aa9.68□□□□□ -0.86
SYCP3-204ENST00000478139 STARD3NLO95772 234 aa9.68□□□□□ -0.86
SYCP3-204ENST00000478139 DDRGK1Q96HY6 314 aa9.68□□□□□ -0.86
SYCP3-204ENST00000478139 KDM2BQ8NHM5 1336 aa9.67□□□□□ -0.86
SYCP3-204ENST00000478139 BTBD11A6QL63 1104 aa9.67□□□□□ -0.86
SYCP3-204ENST00000478139 PRIM1P49642 420 aaKnown RBP9.67□□□□□ -0.86
SYCP3-204ENST00000478139 GNAI1P63096 354 aa9.67□□□□□ -0.86
SYCP3-204ENST00000478139 AEBP1Q8IUX7 1158 aa9.67□□□□□ -0.86
SYCP3-204ENST00000478139 RGS3P49796 1198 aa9.67□□□□□ -0.86
SYCP3-204ENST00000478139 NECTIN2Q92692 538 aa9.67□□□□□ -0.86
SYCP3-204ENST00000478139 INSRP06213 1382 aa9.67□□□□□ -0.86
SYCP3-204ENST00000478139 DUSP27Q5VZP5 1158 aa9.67□□□□□ -0.86
SYCP3-204ENST00000478139 NFE2L2Q16236 605 aa9.66□□□□□ -0.86
SYCP3-204ENST00000478139 NFKBIBQ15653 356 aa9.66□□□□□ -0.86
SYCP3-204ENST00000478139 DCAF5Q96JK2 942 aa9.66□□□□□ -0.86
SYCP3-204ENST00000478139 TFCP2L1Q9NZI6 479 aa9.66□□□□□ -0.86
SYCP3-204ENST00000478139 QRICH2Q9H0J4 1663 aa9.65□□□□□ -0.86
SYCP3-204ENST00000478139 AKAP4Q5JQC9 854 aa9.65□□□□□ -0.86
SYCP3-204ENST00000478139 CENPQQ7L2Z9 268 aaPredicted RBP9.65□□□□□ -0.86
SYCP3-204ENST00000478139 BRPF3Q9ULD4 1205 aa9.65□□□□□ -0.86
SYCP3-204ENST00000478139 AXIN2Q9Y2T1 843 aa9.65□□□□□ -0.86
SYCP3-204ENST00000478139 FRAT1Q92837 279 aaPredicted RBP9.65□□□□□ -0.86
SYCP3-204ENST00000478139 KIAA1210Q9ULL0 1709 aa9.65□□□□□ -0.87
SYCP3-204ENST00000478139 FTSJ3Q8IY81 847 aaKnown RBP9.64□□□□□ -0.87
SYCP3-204ENST00000478139 RTL1A6NKG5 1358 aa9.64□□□□□ -0.87
SYCP3-204ENST00000478139 STRCQ7RTU9 1775 aa9.64□□□□□ -0.87
SYCP3-204ENST00000478139 USP31Q70CQ4 1352 aa9.64□□□□□ -0.87
SYCP3-204ENST00000478139 C8orf34Q49A92 452 aa9.64□□□□□ -0.87
SYCP3-204ENST00000478139 MCM10Q7L590 875 aa9.64□□□□□ -0.87
SYCP3-204ENST00000478139 FNBP4Q8N3X1 1017 aaPredicted RBP9.64□□□□□ -0.87
SYCP3-204ENST00000478139 CCNL1Q9UK58 526 aaPredicted RBP9.64□□□□□ -0.87
SYCP3-204ENST00000478139 DDX58O95786 925 aaKnown RBP9.64□□□□□ -0.87
SYCP3-204ENST00000478139 ATP6V1AP38606 617 aa9.64□□□□□ -0.87
SYCP3-204ENST00000478139 USP19O94966 1318 aa9.63□□□□□ -0.87
SYCP3-204ENST00000478139 ZPR1O75312 459 aa9.63□□□□□ -0.87
SYCP3-204ENST00000478139 TAF7Q15545 349 aaPredicted RBP9.63□□□□□ -0.87
SYCP3-204ENST00000478139 FAM161AQ3B820 660 aa9.63□□□□□ -0.87
SYCP3-204ENST00000478139 UBE2Q2Q8WVN8 375 aa9.63□□□□□ -0.87
SYCP3-204ENST00000478139 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.63□□□□□ -0.87
SYCP3-204ENST00000478139 NEXNQ0ZGT2 675 aa9.63□□□□□ -0.87
SYCP3-204ENST00000478139 FMNL2Q96PY5 1086 aa9.63□□□□□ -0.87
SYCP3-204ENST00000478139 TEX13AQ9BXU3 409 aaPredicted RBP9.63□□□□□ -0.87
SYCP3-204ENST00000478139 CHD2O14647 1828 aaKnown RBP9.63□□□□□ -0.87
SYCP3-204ENST00000478139 KIF24Q5T7B8 1368 aa9.63□□□□□ -0.87
SYCP3-204ENST00000478139 LTBP4Q8N2S1 1624 aa9.63□□□□□ -0.87
SYCP3-204ENST00000478139 SPATA31A1Q5TZJ5 1347 aa9.63□□□□□ -0.87
SYCP3-204ENST00000478139 SPATA31A5Q5VU36 1347 aa9.63□□□□□ -0.87
SYCP3-204ENST00000478139 SPATA31A7Q8IWB4 1347 aa9.63□□□□□ -0.87
SYCP3-204ENST00000478139 AIMP1Q12904 312 aaKnown RBP9.63□□□□□ -0.87
SYCP3-204ENST00000478139 DCTN1Q14203 1278 aa9.63□□□□□ -0.87
SYCP3-204ENST00000478139 GSE1Q14687 1217 aa9.63□□□□□ -0.87
SYCP3-204ENST00000478139 KIF6Q6ZMV9 814 aa9.63□□□□□ -0.87
SYCP3-204ENST00000478139 SPINK5Q9NQ38 1064 aaPredicted RBP9.63□□□□□ -0.87
SYCP3-204ENST00000478139 CRB1P82279 1406 aa9.63□□□□□ -0.87
SYCP3-204ENST00000478139 CPSF1Q10570 1443 aaKnown RBP9.63□□□□□ -0.87
SYCP3-204ENST00000478139 PHF14O94880 888 aa9.62□□□□□ -0.87
SYCP3-204ENST00000478139 TMPOP42166 694 aaKnown RBP9.62□□□□□ -0.87
SYCP3-204ENST00000478139 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.62□□□□□ -0.87
SYCP3-204ENST00000478139 NPC1L1Q9UHC9 1359 aa9.62□□□□□ -0.87
SYCP3-204ENST00000478139 POTEAQ6S8J7 498 aa9.62□□□□□ -0.87
SYCP3-204ENST00000478139 ZNF521Q96K83 1311 aa9.62□□□□□ -0.87
SYCP3-204ENST00000478139 POLD1P28340 1107 aa9.62□□□□□ -0.87
SYCP3-204ENST00000478139 NFATC2IPQ8NCF5 419 aa9.62□□□□□ -0.87
SYCP3-204ENST00000478139 FAM177BA6PVY3 158 aa9.61□□□□□ -0.87
SYCP3-204ENST00000478139 BCAR3O75815 825 aa9.61□□□□□ -0.87
SYCP3-204ENST00000478139 IL13P35225 146 aa9.61□□□□□ -0.87
SYCP3-204ENST00000478139 RFC4P35249 363 aa9.61□□□□□ -0.87
SYCP3-204ENST00000478139 IPO8O15397 1037 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms