RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 ARHGEF10O15013 1369 aa13.21□□□□□ -0.3
MINDY3-206ENST00000477891 RGS12O14924 1447 aa13.2□□□□□ -0.3
MINDY3-206ENST00000477891 KDRP35968 1356 aa13.2□□□□□ -0.3
MINDY3-206ENST00000477891 KIAA0232Q92628 1395 aa13.2□□□□□ -0.3
MINDY3-206ENST00000477891 FER1L4A9Z1Z3 1794 aa13.2□□□□□ -0.3
MINDY3-206ENST00000477891 SLC4A2P04920 1241 aa13.2□□□□□ -0.3
MINDY3-206ENST00000477891 IGSF1Q8N6C5 1336 aa13.2□□□□□ -0.3
MINDY3-206ENST00000477891 BMP2KLQ5H9B9 411 aa13.19□□□□□ -0.3
MINDY3-206ENST00000477891 SPRYD3Q8NCJ5 442 aa13.19□□□□□ -0.3
MINDY3-206ENST00000477891 RTF1Q92541 710 aaKnown RBP13.19□□□□□ -0.3
MINDY3-206ENST00000477891 CEP170BQ9Y4F5 1589 aaPredicted RBP13.19□□□□□ -0.3
MINDY3-206ENST00000477891 ABTB2Q8N961 1025 aa13.19□□□□□ -0.3
MINDY3-206ENST00000477891 HOXC9P31274 260 aa13.18□□□□□ -0.3
MINDY3-206ENST00000477891 GSE1Q14687 1217 aa13.18□□□□□ -0.3
MINDY3-206ENST00000477891 G2E3Q7L622 706 aa13.18□□□□□ -0.3
MINDY3-206ENST00000477891 TSPYL4Q9UJ04 414 aa13.18□□□□□ -0.3
MINDY3-206ENST00000477891 PIK3C2AO00443 1686 aa13.18□□□□□ -0.3
MINDY3-206ENST00000477891 RIMS1Q86UR5 1692 aaKnown RBP13.18□□□□□ -0.3
MINDY3-206ENST00000477891 DCTPP1Q9H773 170 aa13.18□□□□□ -0.3
MINDY3-206ENST00000477891 KIF24Q5T7B8 1368 aa13.18□□□□□ -0.3
MINDY3-206ENST00000477891 HAP1P54257 671 aaPredicted RBP13.17□□□□□ -0.3
MINDY3-206ENST00000477891 LTV1Q96GA3 475 aaPredicted RBP13.17□□□□□ -0.3
MINDY3-206ENST00000477891 C16orf71Q8IYS4 520 aaPredicted RBP13.17□□□□□ -0.3
MINDY3-206ENST00000477891 MEIS3Q99687 375 aa13.17□□□□□ -0.3
MINDY3-206ENST00000477891 XRN1Q8IZH2 1706 aaKnown RBP13.17□□□□□ -0.3
MINDY3-206ENST00000477891 F6X3S4 739 aa13.16□□□□□ -0.3
MINDY3-206ENST00000477891 RBM25P49756 843 aaKnown RBP13.16□□□□□ -0.3
MINDY3-206ENST00000477891 C14orf37Q86TY3 774 aa13.16□□□□□ -0.3
MINDY3-206ENST00000477891 ANKRD44Q8N8A2 993 aa13.16□□□□□ -0.3
MINDY3-206ENST00000477891 GAS2L2Q8NHY3 880 aa13.16□□□□□ -0.3
MINDY3-206ENST00000477891 PTPRCP08575 1304 aa13.16□□□□□ -0.3
MINDY3-206ENST00000477891 ANKARQ7Z5J8 1434 aa13.15□□□□□ -0.3
MINDY3-206ENST00000477891 CEP85Q6P2H3 762 aa13.15□□□□□ -0.3
MINDY3-206ENST00000477891 TBC1D9Q6ZT07 1266 aa13.15□□□□□ -0.3
MINDY3-206ENST00000477891 PLEKHM2Q8IWE5 1019 aa13.15□□□□□ -0.3
MINDY3-206ENST00000477891 IL17REQ8NFR9 667 aa13.15□□□□□ -0.3
MINDY3-206ENST00000477891 MSH6P52701 1360 aa13.14□□□□□ -0.31
MINDY3-206ENST00000477891 ATP10DQ9P241 1426 aa13.14□□□□□ -0.31
MINDY3-206ENST00000477891 RTL1A6NKG5 1358 aa13.14□□□□□ -0.31
MINDY3-206ENST00000477891 GSPT1P15170 499 aaKnown RBP13.14□□□□□ -0.31
MINDY3-206ENST00000477891 SLC4A10Q6U841 1118 aa13.14□□□□□ -0.31
MINDY3-206ENST00000477891 ANKLE2Q86XL3 938 aa13.14□□□□□ -0.31
MINDY3-206ENST00000477891 USHBP1Q8N6Y0 703 aa13.14□□□□□ -0.31
MINDY3-206ENST00000477891 PHF8Q9UPP1 1060 aa13.14□□□□□ -0.31
MINDY3-206ENST00000477891 GNAT3A8MTJ3 354 aa13.13□□□□□ -0.31
MINDY3-206ENST00000477891 RPAP2Q8IXW5 612 aaPredicted RBP13.13□□□□□ -0.31
MINDY3-206ENST00000477891 OTUD7AQ8TE49 926 aaPredicted RBP13.13□□□□□ -0.31
MINDY3-206ENST00000477891 KIF2CQ99661 725 aa13.13□□□□□ -0.31
MINDY3-206ENST00000477891 FMN2Q9NZ56 1722 aa13.13□□□□□ -0.31
MINDY3-206ENST00000477891 NECTIN2Q92692 538 aa13.13□□□□□ -0.31
MINDY3-206ENST00000477891 APBB1O00213 710 aa13.12□□□□□ -0.31
MINDY3-206ENST00000477891 HTATSF1O43719 755 aaKnown RBP13.12□□□□□ -0.31
MINDY3-206ENST00000477891 SMARCA5O60264 1052 aaPredicted RBP13.12□□□□□ -0.31
MINDY3-206ENST00000477891 NWD1Q149M9 1564 aa13.11□□□□□ -0.31
MINDY3-206ENST00000477891 MARF1Q9Y4F3 1742 aaKnown RBP13.11□□□□□ -0.31
MINDY3-206ENST00000477891 ESCO1Q5FWF5 840 aa13.1□□□□□ -0.31
MINDY3-206ENST00000477891 NBPF6Q5VWK0 638 aa13.1□□□□□ -0.31
MINDY3-206ENST00000477891 NBPF4Q96M43 638 aa13.1□□□□□ -0.31
MINDY3-206ENST00000477891 PSME1Q06323 249 aa13.09□□□□□ -0.31
MINDY3-206ENST00000477891 FLIIQ13045 1269 aa13.09□□□□□ -0.31
MINDY3-206ENST00000477891 TAF7Q15545 349 aaPredicted RBP13.09□□□□□ -0.31
MINDY3-206ENST00000477891 TTC22Q5TAA0 569 aa13.09□□□□□ -0.31
MINDY3-206ENST00000477891 RBM42Q9BTD8 480 aaKnown RBP13.09□□□□□ -0.31
MINDY3-206ENST00000477891 STK31Q9BXU1 1019 aa13.09□□□□□ -0.31
MINDY3-206ENST00000477891 CD2BP2O95400 341 aaKnown RBP13.08□□□□□ -0.31
MINDY3-206ENST00000477891 HSCBQ8IWL3 235 aa13.08□□□□□ -0.31
MINDY3-206ENST00000477891 IP6K1Q92551 441 aa13.08□□□□□ -0.31
MINDY3-206ENST00000477891 CDC45O75419 566 aa13.08□□□□□ -0.32
MINDY3-206ENST00000477891 PLEKHG5O94827 1062 aa13.08□□□□□ -0.32
MINDY3-206ENST00000477891 CCT4P50991 539 aaKnown RBP13.08□□□□□ -0.32
MINDY3-206ENST00000477891 CCDC30Q5VVM6 783 aa13.08□□□□□ -0.32
MINDY3-206ENST00000477891 SNX21Q969T3 373 aa13.08□□□□□ -0.32
MINDY3-206ENST00000477891 MAP3K5Q99683 1374 aa13.08□□□□□ -0.32
MINDY3-206ENST00000477891 SETD1BQ9UPS6 1966 aaKnown RBP13.07□□□□□ -0.32
MINDY3-206ENST00000477891 ZBTB7CA1YPR0 619 aa13.07□□□□□ -0.32
MINDY3-206ENST00000477891 XPCQ01831 940 aaPredicted RBP13.07□□□□□ -0.32
MINDY3-206ENST00000477891 FKBP5Q13451 457 aaPredicted RBP13.07□□□□□ -0.32
MINDY3-206ENST00000477891 ORAI2Q96SN7 254 aa13.07□□□□□ -0.32
MINDY3-206ENST00000477891 LGR6Q9HBX8 967 aa13.07□□□□□ -0.32
MINDY3-206ENST00000477891 CHMP5Q9NZZ3 219 aa13.06□□□□□ -0.32
MINDY3-206ENST00000477891 CHD2O14647 1828 aaKnown RBP13.06□□□□□ -0.32
MINDY3-206ENST00000477891 SDSP20132 328 aa13.06□□□□□ -0.32
MINDY3-206ENST00000477891 DDIT3P35638 169 aa13.06□□□□□ -0.32
MINDY3-206ENST00000477891 IL27Q8NEV9 243 aa13.06□□□□□ -0.32
MINDY3-206ENST00000477891 LRRC59Q96AG4 307 aaKnown RBP13.06□□□□□ -0.32
MINDY3-206ENST00000477891 GNAI2P04899 355 aa13.05□□□□□ -0.32
MINDY3-206ENST00000477891 PHAXQ9H814 394 aaKnown RBP13.05□□□□□ -0.32
MINDY3-206ENST00000477891 EXOC6BQ9Y2D4 811 aa13.05□□□□□ -0.32
MINDY3-206ENST00000477891 PNMA6EA0A0J9YXQ4 647 aa13.04□□□□□ -0.32
MINDY3-206ENST00000477891 MCM4P33991 863 aa13.04□□□□□ -0.32
MINDY3-206ENST00000477891 KCNQ3O43525 872 aa13.04□□□□□ -0.32
MINDY3-206ENST00000477891 HMMRO75330 724 aa13.04□□□□□ -0.32
MINDY3-206ENST00000477891 BABAM1Q9NWV8 329 aa13.04□□□□□ -0.32
MINDY3-206ENST00000477891 NCOA3Q9Y6Q9 1424 aa13.03□□□□□ -0.32
MINDY3-206ENST00000477891 USP26Q9BXU7 913 aa13.03□□□□□ -0.32
MINDY3-206ENST00000477891 BRPF3Q9ULD4 1205 aa13.03□□□□□ -0.32
MINDY3-206ENST00000477891 LRRC37A3O60309 1634 aa13.03□□□□□ -0.32
MINDY3-206ENST00000477891 USP54Q70EL1 1684 aa13.03□□□□□ -0.32
MINDY3-206ENST00000477891 CEMIPQ8WUJ3 1361 aa13.03□□□□□ -0.32
MINDY3-206ENST00000477891 ADGRL3Q9HAR2 1447 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms