RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 ABTB2Q8N961 1025 aa20.12■□□□□ 0.81
VARS2-207ENST00000476162 KDRP35968 1356 aa20.12■□□□□ 0.81
VARS2-207ENST00000476162 IGSF1Q8N6C5 1336 aa20.12■□□□□ 0.81
VARS2-207ENST00000476162 FMN2Q9NZ56 1722 aa20.12■□□□□ 0.81
VARS2-207ENST00000476162 CRB1P82279 1406 aa20.11■□□□□ 0.81
VARS2-207ENST00000476162 UPF2Q9HAU5 1272 aaKnown RBP20.11■□□□□ 0.81
VARS2-207ENST00000476162 HAP1P54257 671 aaPredicted RBP20.1■□□□□ 0.81
VARS2-207ENST00000476162 RTF1Q92541 710 aaKnown RBP20.1■□□□□ 0.81
VARS2-207ENST00000476162 LNPKQ9C0E8 428 aa20.1■□□□□ 0.81
VARS2-207ENST00000476162 MIS18AQ9NYP9 233 aa20.1■□□□□ 0.81
VARS2-207ENST00000476162 KIAA0232Q92628 1395 aa20.1■□□□□ 0.81
VARS2-207ENST00000476162 HOXC9P31274 260 aa20.1■□□□□ 0.81
VARS2-207ENST00000476162 CHD1LQ86WJ1 897 aa20.09■□□□□ 0.81
VARS2-207ENST00000476162 PHF8Q9UPP1 1060 aa20.09■□□□□ 0.81
VARS2-207ENST00000476162 TBC1D32Q96NH3 1257 aa20.08■□□□□ 0.81
VARS2-207ENST00000476162 C14orf37Q86TY3 774 aa20.08■□□□□ 0.8
VARS2-207ENST00000476162 SIRT2Q8IXJ6 389 aa20.08■□□□□ 0.8
VARS2-207ENST00000476162 GAS2L2Q8NHY3 880 aa20.07■□□□□ 0.8
VARS2-207ENST00000476162 GCC1Q96CN9 775 aa20.07■□□□□ 0.8
VARS2-207ENST00000476162 CHD2O14647 1828 aaKnown RBP20.07■□□□□ 0.8
VARS2-207ENST00000476162 KIF24Q5T7B8 1368 aa20.06■□□□□ 0.8
VARS2-207ENST00000476162 ANKRD45Q5TZF3 282 aa20.06■□□□□ 0.8
VARS2-207ENST00000476162 TSPYL4Q9UJ04 414 aa20.06■□□□□ 0.8
VARS2-207ENST00000476162 MARF1Q9Y4F3 1742 aaKnown RBP20.05■□□□□ 0.8
VARS2-207ENST00000476162 INTS3Q68E01 1043 aaKnown RBP20.05■□□□□ 0.8
VARS2-207ENST00000476162 LTV1Q96GA3 475 aaPredicted RBP20.05■□□□□ 0.8
VARS2-207ENST00000476162 FAM43AQ8N2R8 423 aa20.04■□□□□ 0.8
VARS2-207ENST00000476162 RGS12O14924 1447 aa20.03■□□□□ 0.8
VARS2-207ENST00000476162 ZNF142P52746 1687 aaPredicted RBP20.03■□□□□ 0.8
VARS2-207ENST00000476162 SLC4A2P04920 1241 aa20.02■□□□□ 0.8
VARS2-207ENST00000476162 ESCO1Q5FWF5 840 aa20.02■□□□□ 0.8
VARS2-207ENST00000476162 PTPRCP08575 1304 aa20.02■□□□□ 0.79
VARS2-207ENST00000476162 MFAP1P55081 439 aaKnown RBP20.02■□□□□ 0.79
VARS2-207ENST00000476162 BECN1Q14457 450 aa20.02■□□□□ 0.79
VARS2-207ENST00000476162 HTATSF1O43719 755 aaKnown RBP20.01■□□□□ 0.79
VARS2-207ENST00000476162 GNAT3A8MTJ3 354 aa20■□□□□ 0.79
VARS2-207ENST00000476162 PSME1Q06323 249 aa20■□□□□ 0.79
VARS2-207ENST00000476162 USP54Q70EL1 1684 aa20■□□□□ 0.79
VARS2-207ENST00000476162 NWD1Q149M9 1564 aa20■□□□□ 0.79
VARS2-207ENST00000476162 NFKBIBQ15653 356 aa20■□□□□ 0.79
VARS2-207ENST00000476162 ADGRL3Q9HAR2 1447 aa20■□□□□ 0.79
VARS2-207ENST00000476162 ADAMTSL3P82987 1691 aa19.99■□□□□ 0.79
VARS2-207ENST00000476162 C22orf23Q9BZE7 217 aa19.99■□□□□ 0.79
VARS2-207ENST00000476162 USHBP1Q8N6Y0 703 aa19.98■□□□□ 0.79
VARS2-207ENST00000476162 SETD1BQ9UPS6 1966 aaKnown RBP19.98■□□□□ 0.79
VARS2-207ENST00000476162 NPHP4O75161 1426 aaPredicted RBP19.97■□□□□ 0.79
VARS2-207ENST00000476162 GLIPR1L2Q4G1C9 344 aa19.97■□□□□ 0.79
VARS2-207ENST00000476162 BMP2KLQ5H9B9 411 aa19.97■□□□□ 0.79
VARS2-207ENST00000476162 G2E3Q7L622 706 aa19.97■□□□□ 0.79
VARS2-207ENST00000476162 IL17REQ8NFR9 667 aa19.97■□□□□ 0.79
VARS2-207ENST00000476162 RTL1A6NKG5 1358 aa19.97■□□□□ 0.79
VARS2-207ENST00000476162 IP6K1Q92551 441 aa19.96■□□□□ 0.79
VARS2-207ENST00000476162 MSH6P52701 1360 aa19.96■□□□□ 0.79
VARS2-207ENST00000476162 DCTPP1Q9H773 170 aa19.95■□□□□ 0.78
VARS2-207ENST00000476162 MAP3K5Q99683 1374 aa19.95■□□□□ 0.78
VARS2-207ENST00000476162 ANKRD44Q8N8A2 993 aa19.95■□□□□ 0.78
VARS2-207ENST00000476162 MEIS3Q99687 375 aa19.95■□□□□ 0.78
VARS2-207ENST00000476162 TBC1D2Q9BYX2 928 aa19.95■□□□□ 0.78
VARS2-207ENST00000476162 ORAI2Q96SN7 254 aa19.94■□□□□ 0.78
VARS2-207ENST00000476162 ATP10DQ9P241 1426 aa19.94■□□□□ 0.78
VARS2-207ENST00000476162 ZBTB7CA1YPR0 619 aa19.94■□□□□ 0.78
VARS2-207ENST00000476162 CEP85Q6P2H3 762 aa19.94■□□□□ 0.78
VARS2-207ENST00000476162 F6X3S4 739 aa19.93■□□□□ 0.78
VARS2-207ENST00000476162 RPAP2Q8IXW5 612 aaPredicted RBP19.93■□□□□ 0.78
VARS2-207ENST00000476162 NFAT5O94916 1531 aa19.93■□□□□ 0.78
VARS2-207ENST00000476162 NBPF6Q5VWK0 638 aa19.92■□□□□ 0.78
VARS2-207ENST00000476162 SLC4A10Q6U841 1118 aa19.92■□□□□ 0.78
VARS2-207ENST00000476162 KCNH5Q8NCM2 988 aa19.92■□□□□ 0.78
VARS2-207ENST00000476162 NBPF4Q96M43 638 aa19.92■□□□□ 0.78
VARS2-207ENST00000476162 LRRC37A3O60309 1634 aa19.92■□□□□ 0.78
VARS2-207ENST00000476162 XPCQ01831 940 aaPredicted RBP19.92■□□□□ 0.78
VARS2-207ENST00000476162 TAF7Q15545 349 aaPredicted RBP19.92■□□□□ 0.78
VARS2-207ENST00000476162 STK31Q9BXU1 1019 aa19.92■□□□□ 0.78
VARS2-207ENST00000476162 LTN1O94822 1766 aa19.92■□□□□ 0.78
VARS2-207ENST00000476162 SLKQ9H2G2 1235 aaPredicted RBP19.91■□□□□ 0.78
VARS2-207ENST00000476162 CCDC30Q5VVM6 783 aa19.9■□□□□ 0.78
VARS2-207ENST00000476162 NECTIN2Q92692 538 aa19.9■□□□□ 0.78
VARS2-207ENST00000476162 ZMYND15Q9H091 742 aa19.9■□□□□ 0.78
VARS2-207ENST00000476162 PLEKHG5O94827 1062 aa19.89■□□□□ 0.77
VARS2-207ENST00000476162 CCT4P50991 539 aaKnown RBP19.89■□□□□ 0.77
VARS2-207ENST00000476162 FRAT2O75474 233 aaPredicted RBP19.88■□□□□ 0.77
VARS2-207ENST00000476162 PLEKHM2Q8IWE5 1019 aa19.88■□□□□ 0.77
VARS2-207ENST00000476162 BABAM1Q9NWV8 329 aa19.88■□□□□ 0.77
VARS2-207ENST00000476162 FLIIQ13045 1269 aa19.88■□□□□ 0.77
VARS2-207ENST00000476162 GCP02774 474 aa19.87■□□□□ 0.77
VARS2-207ENST00000476162 C16orf71Q8IYS4 520 aaPredicted RBP19.87■□□□□ 0.77
VARS2-207ENST00000476162 LRRC59Q96AG4 307 aaKnown RBP19.87■□□□□ 0.77
VARS2-207ENST00000476162 RBM25P49756 843 aaKnown RBP19.87■□□□□ 0.77
VARS2-207ENST00000476162 FKBP5Q13451 457 aaPredicted RBP19.87■□□□□ 0.77
VARS2-207ENST00000476162 TBC1D9Q6ZT07 1266 aa19.87■□□□□ 0.77
VARS2-207ENST00000476162 ANTXR1Q9H6X2 564 aa19.87■□□□□ 0.77
VARS2-207ENST00000476162 LMOD2Q6P5Q4 547 aa19.86■□□□□ 0.77
VARS2-207ENST00000476162 PROSER2Q86WR7 435 aaPredicted RBP19.86■□□□□ 0.77
VARS2-207ENST00000476162 GSPT1P15170 499 aaKnown RBP19.86■□□□□ 0.77
VARS2-207ENST00000476162 LGR6Q9HBX8 967 aa19.85■□□□□ 0.77
VARS2-207ENST00000476162 CEMIPQ8WUJ3 1361 aa19.85■□□□□ 0.77
VARS2-207ENST00000476162 SOS1Q07889 1333 aaPredicted RBP19.85■□□□□ 0.77
VARS2-207ENST00000476162 APBB1O00213 710 aa19.84■□□□□ 0.77
VARS2-207ENST00000476162 ARHGEF25Q86VW2 580 aa19.84■□□□□ 0.77
VARS2-207ENST00000476162 VSIG10Q8N0Z9 540 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms