RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 NBPF14Q5TI25 921 aa12.33□□□□□ -0.44
TNFRSF9-202ENST00000474475 NLRP2Q9NX02 1062 aa12.33□□□□□ -0.44
TNFRSF9-202ENST00000474475 ANKRD36BQ8N2N9 1353 aa12.32□□□□□ -0.44
TNFRSF9-202ENST00000474475 AMER1Q5JTC6 1135 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF9-202ENST00000474475 IL2RBP14784 551 aa12.31□□□□□ -0.44
TNFRSF9-202ENST00000474475 FBLN1P23142 703 aa12.31□□□□□ -0.44
TNFRSF9-202ENST00000474475 TMF1P82094 1093 aa12.31□□□□□ -0.44
TNFRSF9-202ENST00000474475 KLHL34Q8N239 644 aa12.31□□□□□ -0.44
TNFRSF9-202ENST00000474475 IP6K1Q92551 441 aa12.31□□□□□ -0.44
TNFRSF9-202ENST00000474475 NHSQ6T4R5 1651 aa12.31□□□□□ -0.44
TNFRSF9-202ENST00000474475 FAM208AQ9UK61 1670 aaKnown RBP12.3□□□□□ -0.44
TNFRSF9-202ENST00000474475 COG3Q96JB2 828 aa12.3□□□□□ -0.44
TNFRSF9-202ENST00000474475 MAP3K19Q56UN5 1328 aa12.3□□□□□ -0.44
TNFRSF9-202ENST00000474475 KCNQ2O43526 872 aa12.29□□□□□ -0.44
TNFRSF9-202ENST00000474475 LTV1Q96GA3 475 aaPredicted RBP12.29□□□□□ -0.44
TNFRSF9-202ENST00000474475 ANO8Q9HCE9 1232 aaPredicted RBP12.29□□□□□ -0.44
TNFRSF9-202ENST00000474475 ZBTB47Q9UFB7 747 aaPredicted RBP12.29□□□□□ -0.44
TNFRSF9-202ENST00000474475 MYOM1P52179 1685 aa12.29□□□□□ -0.44
TNFRSF9-202ENST00000474475 FYB1O15117 783 aa12.28□□□□□ -0.44
TNFRSF9-202ENST00000474475 HOXC9P31274 260 aa12.28□□□□□ -0.44
TNFRSF9-202ENST00000474475 IFNLR1Q8IU57 520 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF9-202ENST00000474475 PCGF6Q9BYE7 350 aa12.28□□□□□ -0.44
TNFRSF9-202ENST00000474475 TIMELESSQ9UNS1 1208 aa12.28□□□□□ -0.44
TNFRSF9-202ENST00000474475 RGPD2P0DJD1 1756 aa12.28□□□□□ -0.44
TNFRSF9-202ENST00000474475 CASZ1Q86V15 1759 aa12.28□□□□□ -0.44
TNFRSF9-202ENST00000474475 TXNRD1Q16881 649 aa12.27□□□□□ -0.45
TNFRSF9-202ENST00000474475 ACSBG1Q96GR2 724 aa12.27□□□□□ -0.45
TNFRSF9-202ENST00000474475 GGNBP2Q9H3C7 697 aa12.27□□□□□ -0.45
TNFRSF9-202ENST00000474475 KIF20BQ96Q89 1820 aa12.27□□□□□ -0.45
TNFRSF9-202ENST00000474475 AMPHP49418 695 aa12.26□□□□□ -0.45
TNFRSF9-202ENST00000474475 CLSPNQ9HAW4 1339 aa12.26□□□□□ -0.45
TNFRSF9-202ENST00000474475 BTAF1O14981 1849 aa12.25□□□□□ -0.45
TNFRSF9-202ENST00000474475 RRS1Q15050 365 aaKnown RBP12.25□□□□□ -0.45
TNFRSF9-202ENST00000474475 CDCA8Q53HL2 280 aa12.25□□□□□ -0.45
TNFRSF9-202ENST00000474475 CARD14Q9BXL6 1004 aa12.25□□□□□ -0.45
TNFRSF9-202ENST00000474475 PDGFDQ9GZP0 370 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF9-202ENST00000474475 SPON1Q9HCB6 807 aa12.25□□□□□ -0.45
TNFRSF9-202ENST00000474475 RTL1A6NKG5 1358 aa12.25□□□□□ -0.45
TNFRSF9-202ENST00000474475 SHANK3Q9BYB0 1731 aa12.25□□□□□ -0.45
TNFRSF9-202ENST00000474475 DDX54Q8TDD1 881 aaKnown RBP12.24□□□□□ -0.45
TNFRSF9-202ENST00000474475 PAPPAQ13219 1627 aa12.23□□□□□ -0.45
TNFRSF9-202ENST00000474475 MEGF6O75095 1541 aa12.23□□□□□ -0.45
TNFRSF9-202ENST00000474475 NSD3Q9BZ95 1437 aa12.22□□□□□ -0.45
TNFRSF9-202ENST00000474475 SLC15A2Q16348 729 aa12.22□□□□□ -0.45
TNFRSF9-202ENST00000474475 NBPF6Q5VWK0 638 aa12.22□□□□□ -0.45
TNFRSF9-202ENST00000474475 NBPF4Q96M43 638 aa12.22□□□□□ -0.45
TNFRSF9-202ENST00000474475 STK32BQ9NY57 414 aa12.22□□□□□ -0.45
TNFRSF9-202ENST00000474475 DOT1LQ8TEK3 1739 aa12.22□□□□□ -0.45
TNFRSF9-202ENST00000474475 HSP90AB2PQ58FF8 381 aa12.21□□□□□ -0.45
TNFRSF9-202ENST00000474475 INSRP06213 1382 aa12.2□□□□□ -0.46
TNFRSF9-202ENST00000474475 ZBTB7AO95365 584 aa12.2□□□□□ -0.46
TNFRSF9-202ENST00000474475 USHBP1Q8N6Y0 703 aa12.2□□□□□ -0.46
TNFRSF9-202ENST00000474475 PPP1R1BQ9UD71 204 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF9-202ENST00000474475 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
TNFRSF9-202ENST00000474475 FLT4P35916 1363 aa12.19□□□□□ -0.46
TNFRSF9-202ENST00000474475 ZCRB1Q8TBF4 217 aaKnown RBP12.19□□□□□ -0.46
TNFRSF9-202ENST00000474475 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
TNFRSF9-202ENST00000474475 LRRC4BQ9NT99 713 aa12.19□□□□□ -0.46
TNFRSF9-202ENST00000474475 NSD2O96028 1365 aa12.18□□□□□ -0.46
TNFRSF9-202ENST00000474475 KIF24Q5T7B8 1368 aa12.18□□□□□ -0.46
TNFRSF9-202ENST00000474475 ANKRD26Q9UPS8 1709 aa12.18□□□□□ -0.46
TNFRSF9-202ENST00000474475 PTGER2P43116 358 aa12.18□□□□□ -0.46
TNFRSF9-202ENST00000474475 PRIM1P49642 420 aaKnown RBP12.18□□□□□ -0.46
TNFRSF9-202ENST00000474475 ZNF827Q17R98 1081 aa12.18□□□□□ -0.46
TNFRSF9-202ENST00000474475 EMILIN1Q9Y6C2 1016 aa12.18□□□□□ -0.46
TNFRSF9-202ENST00000474475 KAT6BQ8WYB5 2073 aa12.17□□□□□ -0.46
TNFRSF9-202ENST00000474475 YY1P25490 414 aa12.17□□□□□ -0.46
TNFRSF9-202ENST00000474475 SYTL4Q96C24 671 aaPredicted RBP12.17□□□□□ -0.46
TNFRSF9-202ENST00000474475 RTN4Q9NQC3 1192 aaKnown RBP12.17□□□□□ -0.46
TNFRSF9-202ENST00000474475 LY75O60449 1722 aa12.17□□□□□ -0.46
TNFRSF9-202ENST00000474475 CGNL1Q0VF96 1302 aa12.16□□□□□ -0.46
TNFRSF9-202ENST00000474475 CHRDL2Q6WN34 429 aa12.16□□□□□ -0.46
TNFRSF9-202ENST00000474475 RAPGEF4Q8WZA2 1011 aa12.16□□□□□ -0.46
TNFRSF9-202ENST00000474475 POLR3GLQ9BT43 218 aa12.16□□□□□ -0.46
TNFRSF9-202ENST00000474475 HSPA5P11021 654 aaKnown RBP12.15□□□□□ -0.46
TNFRSF9-202ENST00000474475 TATP17735 454 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF9-202ENST00000474475 KCNQ4P56696 695 aa12.15□□□□□ -0.46
TNFRSF9-202ENST00000474475 SLC27A3Q5K4L6 730 aa12.15□□□□□ -0.46
TNFRSF9-202ENST00000474475 CCER1Q8TC90 406 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF9-202ENST00000474475 SGIP1Q9BQI5 828 aa12.15□□□□□ -0.46
TNFRSF9-202ENST00000474475 MTFR1LQ9H019 292 aa12.15□□□□□ -0.46
TNFRSF9-202ENST00000474475 CREBZFQ9NS37 354 aa12.15□□□□□ -0.46
TNFRSF9-202ENST00000474475 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
TNFRSF9-202ENST00000474475 MAP2P11137 1827 aaKnown RBP12.14□□□□□ -0.47
TNFRSF9-202ENST00000474475 NCAPD2Q15021 1401 aa12.14□□□□□ -0.47
TNFRSF9-202ENST00000474475 EIF4G2P78344 907 aaKnown RBP eCLIP12.14□□□□□ -0.47
TNFRSF9-202ENST00000474475 PKD1L3Q7Z443 1732 aa12.14□□□□□ -0.47
TNFRSF9-202ENST00000474475 TUBGCP6Q96RT7 1819 aa12.14□□□□□ -0.47
TNFRSF9-202ENST00000474475 PPM1GO15355 546 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF9-202ENST00000474475 TOGARAM1Q9Y4F4 1720 aa12.13□□□□□ -0.47
TNFRSF9-202ENST00000474475 WASHC2AQ641Q2 1341 aa12.12□□□□□ -0.47
TNFRSF9-202ENST00000474475 PCDH11XQ9BZA7 1347 aa12.12□□□□□ -0.47
TNFRSF9-202ENST00000474475 PCDH11YQ9BZA8 1340 aa12.12□□□□□ -0.47
TNFRSF9-202ENST00000474475 CYP27B1O15528 508 aa12.12□□□□□ -0.47
TNFRSF9-202ENST00000474475 POLKQ9UBT6 870 aa12.12□□□□□ -0.47
TNFRSF9-202ENST00000474475 PNPLA7Q6ZV29 1317 aa12.11□□□□□ -0.47
TNFRSF9-202ENST00000474475 FHDC1Q9C0D6 1143 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF9-202ENST00000474475 CCNL1Q9UK58 526 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF9-202ENST00000474475 COL24A1Q17RW2 1714 aa12.11□□□□□ -0.47
TNFRSF9-202ENST00000474475 TNNT2P45379 298 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms