RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 EVA1CP58658 441 aa16.42■□□□□ 0.22
PCCB-211ENST00000473073 HSPA1LP34931 641 aa16.41■□□□□ 0.22
PCCB-211ENST00000473073 PLCH1Q4KWH8 1693 aa16.41■□□□□ 0.22
PCCB-211ENST00000473073 RAPGEF4Q8WZA2 1011 aa16.4■□□□□ 0.22
PCCB-211ENST00000473073 MYH16Q9H6N6 1097 aa16.4■□□□□ 0.22
PCCB-211ENST00000473073 USP35Q9P2H5 1018 aa16.4■□□□□ 0.22
PCCB-211ENST00000473073 MAP3K5Q99683 1374 aa16.4■□□□□ 0.22
PCCB-211ENST00000473073 ZNF530Q6P9A1 599 aaPredicted RBP16.4■□□□□ 0.22
PCCB-211ENST00000473073 RTF1Q92541 710 aaKnown RBP16.4■□□□□ 0.22
PCCB-211ENST00000473073 JCADQ9P266 1359 aa16.4■□□□□ 0.22
PCCB-211ENST00000473073 IL16Q14005 1332 aa16.39■□□□□ 0.21
PCCB-211ENST00000473073 GNAT3A8MTJ3 354 aa16.39■□□□□ 0.21
PCCB-211ENST00000473073 PLEKHO1Q53GL0 409 aaPredicted RBP16.38■□□□□ 0.21
PCCB-211ENST00000473073 TATP17735 454 aaPredicted RBP16.38■□□□□ 0.21
PCCB-211ENST00000473073 FKBP8Q14318 412 aa16.38■□□□□ 0.21
PCCB-211ENST00000473073 EXOSC9Q06265 439 aaKnown RBP16.37■□□□□ 0.21
PCCB-211ENST00000473073 MBIPQ9NS73 344 aa16.37■□□□□ 0.21
PCCB-211ENST00000473073 CRB1P82279 1406 aa16.37■□□□□ 0.21
PCCB-211ENST00000473073 LRRC37A3O60309 1634 aa16.37■□□□□ 0.21
PCCB-211ENST00000473073 CALD1Q05682 793 aaKnown RBP16.37■□□□□ 0.21
PCCB-211ENST00000473073 AMOTQ4VCS5 1084 aa16.37■□□□□ 0.21
PCCB-211ENST00000473073 IL17REQ8NFR9 667 aa16.37■□□□□ 0.21
PCCB-211ENST00000473073 IFT57Q9NWB7 429 aa16.37■□□□□ 0.21
PCCB-211ENST00000473073 MIS18AQ9NYP9 233 aa16.37■□□□□ 0.21
PCCB-211ENST00000473073 NEFLP07196 543 aa16.36■□□□□ 0.21
PCCB-211ENST00000473073 ZNF853P0CG23 659 aa16.36■□□□□ 0.21
PCCB-211ENST00000473073 GNAI1P63096 354 aa16.36■□□□□ 0.21
PCCB-211ENST00000473073 CARD10Q9BWT7 1032 aa16.36■□□□□ 0.21
PCCB-211ENST00000473073 MPRIPQ6WCQ1 1025 aa16.35■□□□□ 0.21
PCCB-211ENST00000473073 NRAPQ86VF7 1730 aa16.35■□□□□ 0.21
PCCB-211ENST00000473073 CFAP44Q96MT7 982 aa16.35■□□□□ 0.21
PCCB-211ENST00000473073 LGR6Q9HBX8 967 aa16.35■□□□□ 0.21
PCCB-211ENST00000473073 LRP6O75581 1613 aa16.35■□□□□ 0.21
PCCB-211ENST00000473073 PLIN1O60240 522 aa16.35■□□□□ 0.21
PCCB-211ENST00000473073 AKAP4Q5JQC9 854 aa16.35■□□□□ 0.21
PCCB-211ENST00000473073 C1orf141Q5JVX7 400 aa16.35■□□□□ 0.21
PCCB-211ENST00000473073 PARP4Q9UKK3 1724 aaKnown RBP16.34■□□□□ 0.21
PCCB-211ENST00000473073 C8orf37Q96NL8 207 aa16.34■□□□□ 0.21
PCCB-211ENST00000473073 PKD1L3Q7Z443 1732 aa16.34■□□□□ 0.21
PCCB-211ENST00000473073 RNF123Q5XPI4 1314 aa16.34■□□□□ 0.21
PCCB-211ENST00000473073 VIRMAQ69YN4 1812 aaKnown RBP16.34■□□□□ 0.21
PCCB-211ENST00000473073 OVOS2A0A0G2JMS6 1433 aa16.33■□□□□ 0.21
PCCB-211ENST00000473073 BCAR3O75815 825 aa16.33■□□□□ 0.21
PCCB-211ENST00000473073 RRP1P56182 461 aaKnown RBP16.33■□□□□ 0.21
PCCB-211ENST00000473073 HTATSF1O43719 755 aaKnown RBP16.33■□□□□ 0.2
PCCB-211ENST00000473073 BCL2L13Q9BXK5 485 aa16.33■□□□□ 0.2
PCCB-211ENST00000473073 IL2RBP14784 551 aa16.32■□□□□ 0.2
PCCB-211ENST00000473073 SPG7Q9UQ90 795 aa16.32■□□□□ 0.2
PCCB-211ENST00000473073 ELL2O00472 640 aaPredicted RBP16.31■□□□□ 0.2
PCCB-211ENST00000473073 CHL1O00533 1208 aa16.31■□□□□ 0.2
PCCB-211ENST00000473073 KRT24Q2M2I5 525 aa16.31■□□□□ 0.2
PCCB-211ENST00000473073 TSPYL6Q8N831 410 aa16.31■□□□□ 0.2
PCCB-211ENST00000473073 CEMIPQ8WUJ3 1361 aa16.31■□□□□ 0.2
PCCB-211ENST00000473073 SLIT2O94813 1529 aa16.31■□□□□ 0.2
PCCB-211ENST00000473073 CYP27B1O15528 508 aa16.31■□□□□ 0.2
PCCB-211ENST00000473073 PHKG2P15735 406 aa16.31■□□□□ 0.2
PCCB-211ENST00000473073 TSPYL4Q9UJ04 414 aa16.3■□□□□ 0.2
PCCB-211ENST00000473073 SPATA31A6Q5VVP1 1343 aa16.3■□□□□ 0.2
PCCB-211ENST00000473073 SHANK3Q9BYB0 1731 aa16.3■□□□□ 0.2
PCCB-211ENST00000473073 NWD2Q9ULI1 1742 aa16.3■□□□□ 0.2
PCCB-211ENST00000473073 RNMTO43148 476 aaKnown RBP16.29■□□□□ 0.2
PCCB-211ENST00000473073 RARSP54136 660 aaKnown RBP16.29■□□□□ 0.2
PCCB-211ENST00000473073 C8orf58Q8NAV2 365 aa16.29■□□□□ 0.2
PCCB-211ENST00000473073 NGLY1Q96IV0 654 aa16.29■□□□□ 0.2
PCCB-211ENST00000473073 KDM6AO15550 1401 aaPredicted RBP16.29■□□□□ 0.2
PCCB-211ENST00000473073 ZCRB1Q8TBF4 217 aaKnown RBP16.29■□□□□ 0.2
PCCB-211ENST00000473073 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.29■□□□□ 0.2
PCCB-211ENST00000473073 IFNL2Q8IZJ0 200 aa16.28■□□□□ 0.2
PCCB-211ENST00000473073 CCDC9Q9Y3X0 531 aaKnown RBP16.28■□□□□ 0.2
PCCB-211ENST00000473073 TEFQ10587 303 aa16.27■□□□□ 0.19
PCCB-211ENST00000473073 TAF7Q15545 349 aaPredicted RBP16.27■□□□□ 0.19
PCCB-211ENST00000473073 DDX54Q8TDD1 881 aaKnown RBP16.27■□□□□ 0.19
PCCB-211ENST00000473073 WNK3Q9BYP7 1800 aa16.27■□□□□ 0.19
PCCB-211ENST00000473073 SCN11AQ9UI33 1791 aa16.27■□□□□ 0.19
PCCB-211ENST00000473073 ADAMTS7Q9UKP4 1686 aa16.27■□□□□ 0.19
PCCB-211ENST00000473073 SPATA31A1Q5TZJ5 1347 aa16.26■□□□□ 0.19
PCCB-211ENST00000473073 PCDH11XQ9BZA7 1347 aa16.26■□□□□ 0.19
PCCB-211ENST00000473073 PCDH11YQ9BZA8 1340 aa16.26■□□□□ 0.19
PCCB-211ENST00000473073 TCERG1O14776 1098 aaKnown RBP16.26■□□□□ 0.19
PCCB-211ENST00000473073 C20orf194Q5TEA3 1177 aa16.26■□□□□ 0.19
PCCB-211ENST00000473073 MEX3CQ5U5Q3 659 aaKnown RBP16.26■□□□□ 0.19
PCCB-211ENST00000473073 BCL9LQ86UU0 1499 aa16.26■□□□□ 0.19
PCCB-211ENST00000473073 DISP2A7MBM2 1401 aa16.26■□□□□ 0.19
PCCB-211ENST00000473073 TWISTNBQ3B726 338 aaPredicted RBP16.26■□□□□ 0.19
PCCB-211ENST00000473073 PLEKHG2Q9H7P9 1386 aa16.25■□□□□ 0.19
PCCB-211ENST00000473073 VAMP4O75379 141 aa16.25■□□□□ 0.19
PCCB-211ENST00000473073 SSH1Q8WYL5 1049 aa16.25■□□□□ 0.19
PCCB-211ENST00000473073 FRAT1Q92837 279 aaPredicted RBP16.25■□□□□ 0.19
PCCB-211ENST00000473073 SIPA1L3O60292 1781 aaPredicted RBP16.24■□□□□ 0.19
PCCB-211ENST00000473073 KCNQ3O43525 872 aa16.24■□□□□ 0.19
PCCB-211ENST00000473073 CT47B1P0C2W7 299 aaPredicted RBP16.24■□□□□ 0.19
PCCB-211ENST00000473073 UNC5CLQ8IV45 518 aa16.24■□□□□ 0.19
PCCB-211ENST00000473073 SMC4Q9NTJ3 1288 aa16.24■□□□□ 0.19
PCCB-211ENST00000473073 SPATA31A5Q5VU36 1347 aa16.24■□□□□ 0.19
PCCB-211ENST00000473073 SPATA31A7Q8IWB4 1347 aa16.24■□□□□ 0.19
PCCB-211ENST00000473073 KDM3BQ7LBC6 1761 aa16.23■□□□□ 0.19
PCCB-211ENST00000473073 BTBD11A6QL63 1104 aa16.23■□□□□ 0.19
PCCB-211ENST00000473073 CANXP27824 592 aaKnown RBP16.22■□□□□ 0.19
PCCB-211ENST00000473073 DCAF5Q96JK2 942 aa16.22■□□□□ 0.19
PCCB-211ENST00000473073 USP21Q9UK80 565 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms