RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 HOXC9P31274 260 aa18.96■□□□□ 0.63
UBXN11-213ENST00000472155 NFKBIBQ15653 356 aa18.96■□□□□ 0.63
UBXN11-213ENST00000472155 ARHGEF10O15013 1369 aa18.96■□□□□ 0.63
UBXN11-213ENST00000472155 RGS12O14924 1447 aa18.96■□□□□ 0.63
UBXN11-213ENST00000472155 IGSF1Q8N6C5 1336 aa18.95■□□□□ 0.62
UBXN11-213ENST00000472155 G2E3Q7L622 706 aa18.95■□□□□ 0.62
UBXN11-213ENST00000472155 KDRP35968 1356 aa18.93■□□□□ 0.62
UBXN11-213ENST00000472155 XPCQ01831 940 aaPredicted RBP18.93■□□□□ 0.62
UBXN11-213ENST00000472155 ZBTB7CA1YPR0 619 aa18.92■□□□□ 0.62
UBXN11-213ENST00000472155 SLC4A2P04920 1241 aa18.92■□□□□ 0.62
UBXN11-213ENST00000472155 ANKLE2Q86XL3 938 aa18.92■□□□□ 0.62
UBXN11-213ENST00000472155 NECTIN2Q92692 538 aa18.92■□□□□ 0.62
UBXN11-213ENST00000472155 API5Q9BZZ5 524 aaKnown RBP18.92■□□□□ 0.62
UBXN11-213ENST00000472155 SLKQ9H2G2 1235 aaPredicted RBP18.92■□□□□ 0.62
UBXN11-213ENST00000472155 TSPYL4Q9UJ04 414 aa18.92■□□□□ 0.62
UBXN11-213ENST00000472155 PHF8Q9UPP1 1060 aa18.92■□□□□ 0.62
UBXN11-213ENST00000472155 F6X3S4 739 aa18.91■□□□□ 0.62
UBXN11-213ENST00000472155 ANKARQ7Z5J8 1434 aa18.91■□□□□ 0.62
UBXN11-213ENST00000472155 SPRYD3Q8NCJ5 442 aa18.91■□□□□ 0.62
UBXN11-213ENST00000472155 RTF1Q92541 710 aaKnown RBP18.91■□□□□ 0.62
UBXN11-213ENST00000472155 FRAT2O75474 233 aaPredicted RBP18.9■□□□□ 0.62
UBXN11-213ENST00000472155 NWD1Q149M9 1564 aa18.9■□□□□ 0.62
UBXN11-213ENST00000472155 ESCO1Q5FWF5 840 aa18.9■□□□□ 0.62
UBXN11-213ENST00000472155 TBC1D2Q9BYX2 928 aa18.9■□□□□ 0.62
UBXN11-213ENST00000472155 MEIS3Q99687 375 aa18.89■□□□□ 0.62
UBXN11-213ENST00000472155 MSH6P52701 1360 aa18.89■□□□□ 0.62
UBXN11-213ENST00000472155 CHD2O14647 1828 aaKnown RBP18.89■□□□□ 0.61
UBXN11-213ENST00000472155 UPF2Q9HAU5 1272 aaKnown RBP18.89■□□□□ 0.61
UBXN11-213ENST00000472155 C16orf71Q8IYS4 520 aaPredicted RBP18.88■□□□□ 0.61
UBXN11-213ENST00000472155 ORAI2Q96SN7 254 aa18.88■□□□□ 0.61
UBXN11-213ENST00000472155 INTS3Q68E01 1043 aaKnown RBP18.88■□□□□ 0.61
UBXN11-213ENST00000472155 IL17REQ8NFR9 667 aa18.88■□□□□ 0.61
UBXN11-213ENST00000472155 C22orf23Q9BZE7 217 aa18.88■□□□□ 0.61
UBXN11-213ENST00000472155 KIAA0232Q92628 1395 aa18.88■□□□□ 0.61
UBXN11-213ENST00000472155 APBB1O00213 710 aa18.87■□□□□ 0.61
UBXN11-213ENST00000472155 SLC4A10Q6U841 1118 aa18.87■□□□□ 0.61
UBXN11-213ENST00000472155 OTUD7AQ8TE49 926 aaPredicted RBP18.87■□□□□ 0.61
UBXN11-213ENST00000472155 GCC1Q96CN9 775 aa18.86■□□□□ 0.61
UBXN11-213ENST00000472155 ATP10DQ9P241 1426 aa18.85■□□□□ 0.61
UBXN11-213ENST00000472155 NBPF6Q5VWK0 638 aa18.85■□□□□ 0.61
UBXN11-213ENST00000472155 GAS2L2Q8NHY3 880 aa18.85■□□□□ 0.61
UBXN11-213ENST00000472155 LRRC59Q96AG4 307 aaKnown RBP18.85■□□□□ 0.61
UBXN11-213ENST00000472155 NBPF4Q96M43 638 aa18.85■□□□□ 0.61
UBXN11-213ENST00000472155 GNAT3A8MTJ3 354 aa18.84■□□□□ 0.61
UBXN11-213ENST00000472155 SMARCA5O60264 1052 aaPredicted RBP18.84■□□□□ 0.61
UBXN11-213ENST00000472155 PSME1Q06323 249 aa18.84■□□□□ 0.61
UBXN11-213ENST00000472155 CEP85Q6P2H3 762 aa18.83■□□□□ 0.61
UBXN11-213ENST00000472155 USP35Q9P2H5 1018 aa18.83■□□□□ 0.61
UBXN11-213ENST00000472155 LTN1O94822 1766 aa18.82■□□□□ 0.6
UBXN11-213ENST00000472155 RTL1A6NKG5 1358 aa18.82■□□□□ 0.6
UBXN11-213ENST00000472155 GSPT1P15170 499 aaKnown RBP18.82■□□□□ 0.6
UBXN11-213ENST00000472155 BECN1Q14457 450 aa18.81■□□□□ 0.6
UBXN11-213ENST00000472155 BMP2KLQ5H9B9 411 aa18.81■□□□□ 0.6
UBXN11-213ENST00000472155 ANTXR1Q9H6X2 564 aa18.81■□□□□ 0.6
UBXN11-213ENST00000472155 DCTPP1Q9H773 170 aa18.81■□□□□ 0.6
UBXN11-213ENST00000472155 LMOD2Q6P5Q4 547 aa18.81■□□□□ 0.6
UBXN11-213ENST00000472155 ANKRD44Q8N8A2 993 aa18.81■□□□□ 0.6
UBXN11-213ENST00000472155 LGR6Q9HBX8 967 aa18.81■□□□□ 0.6
UBXN11-213ENST00000472155 CHMP4BQ9H444 224 aaKnown RBP18.8■□□□□ 0.6
UBXN11-213ENST00000472155 RGPD2P0DJD1 1756 aa18.8■□□□□ 0.6
UBXN11-213ENST00000472155 PTPRCP08575 1304 aa18.8■□□□□ 0.6
UBXN11-213ENST00000472155 TBC1D9Q6ZT07 1266 aa18.8■□□□□ 0.6
UBXN11-213ENST00000472155 PLEKHM2Q8IWE5 1019 aa18.8■□□□□ 0.6
UBXN11-213ENST00000472155 MAP3K5Q99683 1374 aa18.79■□□□□ 0.6
UBXN11-213ENST00000472155 IP6K1Q92551 441 aa18.79■□□□□ 0.6
UBXN11-213ENST00000472155 ADGRL3Q9HAR2 1447 aa18.79■□□□□ 0.6
UBXN11-213ENST00000472155 ADAMTSL3P82987 1691 aa18.78■□□□□ 0.6
UBXN11-213ENST00000472155 NFAT5O94916 1531 aa18.78■□□□□ 0.6
UBXN11-213ENST00000472155 ZNF142P52746 1687 aaPredicted RBP18.78■□□□□ 0.6
UBXN11-213ENST00000472155 KCNQ3O43525 872 aa18.77■□□□□ 0.6
UBXN11-213ENST00000472155 KIF24Q5T7B8 1368 aa18.77■□□□□ 0.6
UBXN11-213ENST00000472155 LRRC37A3O60309 1634 aa18.77■□□□□ 0.6
UBXN11-213ENST00000472155 NPHP4O75161 1426 aaPredicted RBP18.77■□□□□ 0.59
UBXN11-213ENST00000472155 FLIIQ13045 1269 aa18.76■□□□□ 0.59
UBXN11-213ENST00000472155 USP54Q70EL1 1684 aa18.76■□□□□ 0.59
UBXN11-213ENST00000472155 DDX17Q92841 729 aaKnown RBP18.76■□□□□ 0.59
UBXN11-213ENST00000472155 HAP1P54257 671 aaPredicted RBP18.75■□□□□ 0.59
UBXN11-213ENST00000472155 FKBP5Q13451 457 aaPredicted RBP18.75■□□□□ 0.59
UBXN11-213ENST00000472155 KIF2CQ99661 725 aa18.75■□□□□ 0.59
UBXN11-213ENST00000472155 RBM42Q9BTD8 480 aaKnown RBP18.75■□□□□ 0.59
UBXN11-213ENST00000472155 PHAXQ9H814 394 aaKnown RBP18.75■□□□□ 0.59
UBXN11-213ENST00000472155 TAF7Q15545 349 aaPredicted RBP18.75■□□□□ 0.59
UBXN11-213ENST00000472155 CD2BP2O95400 341 aaKnown RBP18.74■□□□□ 0.59
UBXN11-213ENST00000472155 AXIN2Q9Y2T1 843 aa18.74■□□□□ 0.59
UBXN11-213ENST00000472155 HTATSF1O43719 755 aaKnown RBP18.74■□□□□ 0.59
UBXN11-213ENST00000472155 GCP02774 474 aa18.74■□□□□ 0.59
UBXN11-213ENST00000472155 STK31Q9BXU1 1019 aa18.74■□□□□ 0.59
UBXN11-213ENST00000472155 RPAP2Q8IXW5 612 aaPredicted RBP18.73■□□□□ 0.59
UBXN11-213ENST00000472155 TSHZ3Q63HK5 1081 aa18.73■□□□□ 0.59
UBXN11-213ENST00000472155 MPRIPQ6WCQ1 1025 aa18.73■□□□□ 0.59
UBXN11-213ENST00000472155 ANXA1P04083 346 aa18.72■□□□□ 0.59
UBXN11-213ENST00000472155 EIF2S2P20042 333 aaKnown RBP18.72■□□□□ 0.59
UBXN11-213ENST00000472155 RBM25P49756 843 aaKnown RBP18.72■□□□□ 0.59
UBXN11-213ENST00000472155 EXOC6BQ9Y2D4 811 aa18.72■□□□□ 0.59
UBXN11-213ENST00000472155 CCDC30Q5VVM6 783 aa18.71■□□□□ 0.59
UBXN11-213ENST00000472155 FAM208AQ9UK61 1670 aaKnown RBP18.71■□□□□ 0.59
UBXN11-213ENST00000472155 PNMA6EA0A0J9YXQ4 647 aa18.71■□□□□ 0.59
UBXN11-213ENST00000472155 TTC22Q5TAA0 569 aa18.7■□□□□ 0.58
UBXN11-213ENST00000472155 PROSER2Q86WR7 435 aaPredicted RBP18.7■□□□□ 0.58
UBXN11-213ENST00000472155 GSE1Q14687 1217 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms