RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 CABP1Q9NZU7 370 aa4.9□□□□□ -1.63
TRIM59-202ENST00000468542 ACEP12821 1306 aa4.9□□□□□ -1.63
TRIM59-202ENST00000468542 TTC21AQ8NDW8 1320 aa4.9□□□□□ -1.63
TRIM59-202ENST00000468542 KIF20BQ96Q89 1820 aa4.9□□□□□ -1.63
TRIM59-202ENST00000468542 ANKRD36BQ8N2N9 1353 aa4.9□□□□□ -1.63
TRIM59-202ENST00000468542 DISP3Q9P2K9 1392 aa4.9□□□□□ -1.63
TRIM59-202ENST00000468542 USP6P35125 1406 aa4.89□□□□□ -1.63
TRIM59-202ENST00000468542 TNS3Q68CZ2 1445 aa4.89□□□□□ -1.63
TRIM59-202ENST00000468542 COL14A1Q05707 1796 aaKnown RBP4.89□□□□□ -1.63
TRIM59-202ENST00000468542 WNK3Q9BYP7 1800 aa4.89□□□□□ -1.63
TRIM59-202ENST00000468542 NUTM2FA1L443 756 aa4.89□□□□□ -1.63
TRIM59-202ENST00000468542 PSDA5PKW4 1024 aaPredicted RBP4.89□□□□□ -1.63
TRIM59-202ENST00000468542 RGL2O15211 777 aa4.89□□□□□ -1.63
TRIM59-202ENST00000468542 NUDT7P0C024 238 aa4.89□□□□□ -1.63
TRIM59-202ENST00000468542 KRT28Q7Z3Y7 464 aa4.89□□□□□ -1.63
TRIM59-202ENST00000468542 HDGFL2Q7Z4V5 671 aaPredicted RBP4.89□□□□□ -1.63
TRIM59-202ENST00000468542 LHX6Q9UPM6 363 aa4.89□□□□□ -1.63
TRIM59-202ENST00000468542 EDC4Q6P2E9 1401 aaKnown RBP4.89□□□□□ -1.63
TRIM59-202ENST00000468542 SLIT2O94813 1529 aa4.88□□□□□ -1.63
TRIM59-202ENST00000468542 NFAT5O94916 1531 aa4.88□□□□□ -1.63
TRIM59-202ENST00000468542 STK25O00506 426 aa4.88□□□□□ -1.63
TRIM59-202ENST00000468542 ECM2O94769 699 aaPredicted RBP4.88□□□□□ -1.63
TRIM59-202ENST00000468542 LSM11P83369 360 aaKnown RBP eCLIP4.88□□□□□ -1.63
TRIM59-202ENST00000468542 ANKRD13DQ6ZTN6 518 aa4.88□□□□□ -1.63
TRIM59-202ENST00000468542 PMFBP1Q8TBY8 1022 aa4.88□□□□□ -1.63
TRIM59-202ENST00000468542 PCDHGA4Q9Y5G9 962 aa4.88□□□□□ -1.63
TRIM59-202ENST00000468542 FAM208AQ9UK61 1670 aaKnown RBP4.88□□□□□ -1.63
TRIM59-202ENST00000468542 USP19O94966 1318 aa4.88□□□□□ -1.63
TRIM59-202ENST00000468542 USP31Q70CQ4 1352 aa4.88□□□□□ -1.63
TRIM59-202ENST00000468542 LTN1O94822 1766 aa4.88□□□□□ -1.63
TRIM59-202ENST00000468542 CDK12Q9NYV4 1490 aaPredicted RBP4.88□□□□□ -1.63
TRIM59-202ENST00000468542 CAMTA1Q9Y6Y1 1673 aa4.87□□□□□ -1.63
TRIM59-202ENST00000468542 RGPD5Q99666 1765 aa4.87□□□□□ -1.63
TRIM59-202ENST00000468542 NLRP13Q86W25 1043 aa4.87□□□□□ -1.63
TRIM59-202ENST00000468542 SLC12A5Q9H2X9 1139 aa4.87□□□□□ -1.63
TRIM59-202ENST00000468542 A0A1W2PP64 1363 aa4.87□□□□□ -1.63
TRIM59-202ENST00000468542 CPDO75976 1380 aa4.87□□□□□ -1.63
TRIM59-202ENST00000468542 KTN1Q86UP2 1357 aaKnown RBP4.87□□□□□ -1.63
TRIM59-202ENST00000468542 OVOS2A0A0J9YW53 1432 aa4.87□□□□□ -1.63
TRIM59-202ENST00000468542 OVOS2Q6IE36 1432 aa4.87□□□□□ -1.63
TRIM59-202ENST00000468542 KCNH5Q8NCM2 988 aa4.86□□□□□ -1.63
TRIM59-202ENST00000468542 TMC1Q8TDI8 760 aa4.86□□□□□ -1.63
TRIM59-202ENST00000468542 PTCD2Q8WV60 388 aaKnown RBP4.86□□□□□ -1.63
TRIM59-202ENST00000468542 DDX17Q92841 729 aaKnown RBP4.86□□□□□ -1.63
TRIM59-202ENST00000468542 IRX2Q9BZI1 471 aaPredicted RBP4.86□□□□□ -1.63
TRIM59-202ENST00000468542 KIF7Q2M1P5 1343 aa4.86□□□□□ -1.63
TRIM59-202ENST00000468542 WASHC2AQ641Q2 1341 aa4.86□□□□□ -1.63
TRIM59-202ENST00000468542 TTC21BQ7Z4L5 1316 aa4.86□□□□□ -1.63
TRIM59-202ENST00000468542 NSD2O96028 1365 aa4.86□□□□□ -1.63
TRIM59-202ENST00000468542 NPC1L1Q9UHC9 1359 aa4.86□□□□□ -1.63
TRIM59-202ENST00000468542 THSD7AQ9UPZ6 1657 aa4.86□□□□□ -1.63
TRIM59-202ENST00000468542 PARP4Q9UKK3 1724 aaKnown RBP4.86□□□□□ -1.63
TRIM59-202ENST00000468542 MAP2P11137 1827 aaKnown RBP4.86□□□□□ -1.63
TRIM59-202ENST00000468542 XPCQ01831 940 aaPredicted RBP4.85□□□□□ -1.63
TRIM59-202ENST00000468542 FNBP4Q8N3X1 1017 aaPredicted RBP4.85□□□□□ -1.63
TRIM59-202ENST00000468542 ABTB2Q8N961 1025 aa4.85□□□□□ -1.63
TRIM59-202ENST00000468542 TMC2Q8TDI7 906 aa4.85□□□□□ -1.63
TRIM59-202ENST00000468542 AXIN2Q9Y2T1 843 aa4.85□□□□□ -1.63
TRIM59-202ENST00000468542 CGNL1Q0VF96 1302 aa4.85□□□□□ -1.63
TRIM59-202ENST00000468542 KIF24Q5T7B8 1368 aa4.85□□□□□ -1.63
TRIM59-202ENST00000468542 CCDC7Q96M83 1385 aa4.85□□□□□ -1.63
TRIM59-202ENST00000468542 BCL9LQ86UU0 1499 aa4.85□□□□□ -1.63
TRIM59-202ENST00000468542 GLI3P10071 1580 aa4.85□□□□□ -1.63
TRIM59-202ENST00000468542 BRWD3Q6RI45 1802 aa4.84□□□□□ -1.63
TRIM59-202ENST00000468542 ATRNO75882 1429 aa4.84□□□□□ -1.63
TRIM59-202ENST00000468542 NCAPD2Q15021 1401 aa4.84□□□□□ -1.63
TRIM59-202ENST00000468542 C11orf95C9JLR9 678 aaPredicted RBP4.84□□□□□ -1.63
TRIM59-202ENST00000468542 FYB1O15117 783 aa4.84□□□□□ -1.63
TRIM59-202ENST00000468542 HRO43593 1189 aa4.84□□□□□ -1.63
TRIM59-202ENST00000468542 GCP02774 474 aa4.84□□□□□ -1.63
TRIM59-202ENST00000468542 FOXK1P85037 733 aa4.84□□□□□ -1.63
TRIM59-202ENST00000468542 ZNF772Q68DY9 489 aaPredicted RBP4.84□□□□□ -1.63
TRIM59-202ENST00000468542 CARD14Q9BXL6 1004 aa4.84□□□□□ -1.63
TRIM59-202ENST00000468542 RGS17Q9UGC6 210 aaPredicted RBP4.84□□□□□ -1.63
TRIM59-202ENST00000468542 RGPD1P0DJD0 1748 aa4.83□□□□□ -1.64
TRIM59-202ENST00000468542 SMG6Q86US8 1419 aaKnown RBP4.83□□□□□ -1.64
TRIM59-202ENST00000468542 NSD3Q9BZ95 1437 aa4.83□□□□□ -1.64
TRIM59-202ENST00000468542 AATKQ6ZMQ8 1374 aa4.83□□□□□ -1.64
TRIM59-202ENST00000468542 PLEKHG2Q9H7P9 1386 aa4.83□□□□□ -1.64
TRIM59-202ENST00000468542 TK2O00142 265 aa4.83□□□□□ -1.64
TRIM59-202ENST00000468542 PER1O15534 1290 aaPredicted RBP4.83□□□□□ -1.64
TRIM59-202ENST00000468542 ARHGEF25Q86VW2 580 aa4.83□□□□□ -1.64
TRIM59-202ENST00000468542 COG3Q96JB2 828 aa4.83□□□□□ -1.64
TRIM59-202ENST00000468542 KNSTRNQ9Y448 316 aa4.83□□□□□ -1.64
TRIM59-202ENST00000468542 SBF2Q86WG5 1849 aa4.83□□□□□ -1.64
TRIM59-202ENST00000468542 SHANK3Q9BYB0 1731 aa4.83□□□□□ -1.64
TRIM59-202ENST00000468542 PEAK1Q9H792 1746 aa4.83□□□□□ -1.64
TRIM59-202ENST00000468542 RTL1A6NKG5 1358 aa4.82□□□□□ -1.64
TRIM59-202ENST00000468542 ARHGAP33O14559 1287 aa4.82□□□□□ -1.64
TRIM59-202ENST00000468542 ONECUT3O60422 494 aaPredicted RBP4.82□□□□□ -1.64
TRIM59-202ENST00000468542 HAP1P54257 671 aaPredicted RBP4.82□□□□□ -1.64
TRIM59-202ENST00000468542 AMER1Q5JTC6 1135 aaPredicted RBP4.82□□□□□ -1.64
TRIM59-202ENST00000468542 MEX3CQ5U5Q3 659 aaKnown RBP4.82□□□□□ -1.64
TRIM59-202ENST00000468542 LMOD2Q6P5Q4 547 aa4.82□□□□□ -1.64
TRIM59-202ENST00000468542 NME9Q86XW9 330 aa4.82□□□□□ -1.64
TRIM59-202ENST00000468542 PANK3Q9H999 370 aa4.82□□□□□ -1.64
TRIM59-202ENST00000468542 PRDM11Q9NQV5 511 aa4.82□□□□□ -1.64
TRIM59-202ENST00000468542 GPHNQ9NQX3 736 aaPredicted RBP4.82□□□□□ -1.64
TRIM59-202ENST00000468542 RGPD3A6NKT7 1758 aaPredicted RBP4.82□□□□□ -1.64
TRIM59-202ENST00000468542 RGPD4Q7Z3J3 1758 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms