RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 USP35Q9P2H5 1018 aa24.2■■□□□ 1.46
CAPN3-209ENST00000466222 RGPD5Q99666 1765 aa24.19■■□□□ 1.46
CAPN3-209ENST00000466222 JCADQ9P266 1359 aa24.19■■□□□ 1.46
CAPN3-209ENST00000466222 LMO7Q8WWI1 1683 aa24.18■■□□□ 1.46
CAPN3-209ENST00000466222 GAS2L2Q8NHY3 880 aa24.18■■□□□ 1.46
CAPN3-209ENST00000466222 LAS1LQ9Y4W2 734 aaKnown RBP24.18■■□□□ 1.46
CAPN3-209ENST00000466222 RGPD2P0DJD1 1756 aa24.17■■□□□ 1.46
CAPN3-209ENST00000466222 ABCC6O95255 1503 aa24.17■■□□□ 1.46
CAPN3-209ENST00000466222 B4GALNT3Q6L9W6 998 aa24.16■■□□□ 1.46
CAPN3-209ENST00000466222 RAPGEF4Q8WZA2 1011 aa24.16■■□□□ 1.46
CAPN3-209ENST00000466222 MEGF6O75095 1541 aa24.14■■□□□ 1.45
CAPN3-209ENST00000466222 LMOD3Q0VAK6 560 aa24.14■■□□□ 1.45
CAPN3-209ENST00000466222 PLEKHO1Q53GL0 409 aaPredicted RBP24.14■■□□□ 1.45
CAPN3-209ENST00000466222 CARD10Q9BWT7 1032 aa24.14■■□□□ 1.45
CAPN3-209ENST00000466222 GNAT3A8MTJ3 354 aa24.13■■□□□ 1.45
CAPN3-209ENST00000466222 ZNF530Q6P9A1 599 aaPredicted RBP24.13■■□□□ 1.45
CAPN3-209ENST00000466222 IL17REQ8NFR9 667 aa24.13■■□□□ 1.45
CAPN3-209ENST00000466222 TATP17735 454 aaPredicted RBP24.12■■□□□ 1.45
CAPN3-209ENST00000466222 RTF1Q92541 710 aaKnown RBP24.12■■□□□ 1.45
CAPN3-209ENST00000466222 C8orf37Q96NL8 207 aa24.12■■□□□ 1.45
CAPN3-209ENST00000466222 LGR6Q9HBX8 967 aa24.11■■□□□ 1.45
CAPN3-209ENST00000466222 MIS18AQ9NYP9 233 aa24.11■■□□□ 1.45
CAPN3-209ENST00000466222 RCAN3Q9UKA8 241 aa24.11■■□□□ 1.45
CAPN3-209ENST00000466222 IL16Q14005 1332 aa24.1■■□□□ 1.45
CAPN3-209ENST00000466222 AMOTQ4VCS5 1084 aa24.1■■□□□ 1.45
CAPN3-209ENST00000466222 MYH16Q9H6N6 1097 aa24.1■■□□□ 1.45
CAPN3-209ENST00000466222 MPRIPQ6WCQ1 1025 aa24.1■■□□□ 1.45
CAPN3-209ENST00000466222 MAP3K5Q99683 1374 aa24.09■■□□□ 1.45
CAPN3-209ENST00000466222 ZNF853P0CG23 659 aa24.08■■□□□ 1.45
CAPN3-209ENST00000466222 FAM208AQ9UK61 1670 aaKnown RBP24.08■■□□□ 1.45
CAPN3-209ENST00000466222 CRB1P82279 1406 aa24.08■■□□□ 1.45
CAPN3-209ENST00000466222 NGLY1Q96IV0 654 aa24.08■■□□□ 1.44
CAPN3-209ENST00000466222 MBIPQ9NS73 344 aa24.08■■□□□ 1.44
CAPN3-209ENST00000466222 LRP6O75581 1613 aa24.07■■□□□ 1.44
CAPN3-209ENST00000466222 EXOSC9Q06265 439 aaKnown RBP24.07■■□□□ 1.44
CAPN3-209ENST00000466222 AKAP4Q5JQC9 854 aa24.07■■□□□ 1.44
CAPN3-209ENST00000466222 CFAP44Q96MT7 982 aa24.07■■□□□ 1.44
CAPN3-209ENST00000466222 IFT57Q9NWB7 429 aa24.06■■□□□ 1.44
CAPN3-209ENST00000466222 SPATA31A6Q5VVP1 1343 aa24.06■■□□□ 1.44
CAPN3-209ENST00000466222 IL2RBP14784 551 aa24.06■■□□□ 1.44
CAPN3-209ENST00000466222 CYP27B1O15528 508 aa24.05■■□□□ 1.44
CAPN3-209ENST00000466222 HTATSF1O43719 755 aaKnown RBP24.05■■□□□ 1.44
CAPN3-209ENST00000466222 CALD1Q05682 793 aaKnown RBP24.05■■□□□ 1.44
CAPN3-209ENST00000466222 C1orf141Q5JVX7 400 aa24.05■■□□□ 1.44
CAPN3-209ENST00000466222 COL14A1Q05707 1796 aaKnown RBP24.05■■□□□ 1.44
CAPN3-209ENST00000466222 GNAI1P63096 354 aa24.04■■□□□ 1.44
CAPN3-209ENST00000466222 CCDC136Q96JN2 1154 aa24.04■■□□□ 1.44
CAPN3-209ENST00000466222 SPG7Q9UQ90 795 aa24.04■■□□□ 1.44
CAPN3-209ENST00000466222 CHL1O00533 1208 aa24.02■■□□□ 1.44
CAPN3-209ENST00000466222 MSH5O43196 834 aa24.02■■□□□ 1.44
CAPN3-209ENST00000466222 PHKG2P15735 406 aa24.02■■□□□ 1.44
CAPN3-209ENST00000466222 SLIT2O94813 1529 aa24.02■■□□□ 1.44
CAPN3-209ENST00000466222 OVOS2A0A0G2JMS6 1433 aa24.02■■□□□ 1.44
CAPN3-209ENST00000466222 ELL2O00472 640 aaPredicted RBP24.02■■□□□ 1.44
CAPN3-209ENST00000466222 KRT24Q2M2I5 525 aa24.02■■□□□ 1.44
CAPN3-209ENST00000466222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.02■■□□□ 1.44
CAPN3-209ENST00000466222 PLIN1O60240 522 aa24.01■■□□□ 1.43
CAPN3-209ENST00000466222 BCAR3O75815 825 aa24.01■■□□□ 1.43
CAPN3-209ENST00000466222 TSPYL6Q8N831 410 aa24.01■■□□□ 1.43
CAPN3-209ENST00000466222 ZCRB1Q8TBF4 217 aaKnown RBP24.01■■□□□ 1.43
CAPN3-209ENST00000466222 RNMTO43148 476 aaKnown RBP24■■□□□ 1.43
CAPN3-209ENST00000466222 CCDC9Q9Y3X0 531 aaKnown RBP24■■□□□ 1.43
CAPN3-209ENST00000466222 RRP1P56182 461 aaKnown RBP24■■□□□ 1.43
CAPN3-209ENST00000466222 DDX54Q8TDD1 881 aaKnown RBP24■■□□□ 1.43
CAPN3-209ENST00000466222 CEMIPQ8WUJ3 1361 aa24■■□□□ 1.43
CAPN3-209ENST00000466222 UNC5CLQ8IV45 518 aa23.99■■□□□ 1.43
CAPN3-209ENST00000466222 C8orf58Q8NAV2 365 aa23.99■■□□□ 1.43
CAPN3-209ENST00000466222 BCL2L13Q9BXK5 485 aa23.99■■□□□ 1.43
CAPN3-209ENST00000466222 SPATA31A1Q5TZJ5 1347 aa23.99■■□□□ 1.43
CAPN3-209ENST00000466222 DLG5Q8TDM6 1919 aa23.99■■□□□ 1.43
CAPN3-209ENST00000466222 MEX3CQ5U5Q3 659 aaKnown RBP23.98■■□□□ 1.43
CAPN3-209ENST00000466222 BCL9LQ86UU0 1499 aa23.98■■□□□ 1.43
CAPN3-209ENST00000466222 IFNL2Q8IZJ0 200 aa23.98■■□□□ 1.43
CAPN3-209ENST00000466222 FNBP4Q8N3X1 1017 aaPredicted RBP23.98■■□□□ 1.43
CAPN3-209ENST00000466222 TSPYL4Q9UJ04 414 aa23.98■■□□□ 1.43
CAPN3-209ENST00000466222 TAF7Q15545 349 aaPredicted RBP23.96■■□□□ 1.43
CAPN3-209ENST00000466222 SPATA31A5Q5VU36 1347 aa23.96■■□□□ 1.43
CAPN3-209ENST00000466222 SPATA31A7Q8IWB4 1347 aa23.96■■□□□ 1.43
CAPN3-209ENST00000466222 RARSP54136 660 aaKnown RBP23.96■■□□□ 1.43
CAPN3-209ENST00000466222 ERICH6Q7L0X2 663 aa23.96■■□□□ 1.43
CAPN3-209ENST00000466222 USP21Q9UK80 565 aa23.96■■□□□ 1.43
CAPN3-209ENST00000466222 KDM6AO15550 1401 aaPredicted RBP23.95■■□□□ 1.42
CAPN3-209ENST00000466222 TEFQ10587 303 aa23.94■■□□□ 1.42
CAPN3-209ENST00000466222 PLCH1Q4KWH8 1693 aa23.94■■□□□ 1.42
CAPN3-209ENST00000466222 KCNQ3O43525 872 aa23.93■■□□□ 1.42
CAPN3-209ENST00000466222 DISP2A7MBM2 1401 aa23.93■■□□□ 1.42
CAPN3-209ENST00000466222 PCDH11XQ9BZA7 1347 aa23.93■■□□□ 1.42
CAPN3-209ENST00000466222 PCDH11YQ9BZA8 1340 aa23.93■■□□□ 1.42
CAPN3-209ENST00000466222 TCERG1O14776 1098 aaKnown RBP23.92■■□□□ 1.42
CAPN3-209ENST00000466222 VAMP4O75379 141 aa23.92■■□□□ 1.42
CAPN3-209ENST00000466222 NFATC2IPQ8NCF5 419 aa23.91■■□□□ 1.42
CAPN3-209ENST00000466222 DCAF5Q96JK2 942 aa23.91■■□□□ 1.42
CAPN3-209ENST00000466222 VPS72Q15906 364 aa23.9■■□□□ 1.42
CAPN3-209ENST00000466222 FAM98CQ17RN3 349 aaKnown RBP23.9■■□□□ 1.42
CAPN3-209ENST00000466222 TWISTNBQ3B726 338 aaPredicted RBP23.9■■□□□ 1.42
CAPN3-209ENST00000466222 AFF2P51816 1311 aa23.9■■□□□ 1.42
CAPN3-209ENST00000466222 BTBD11A6QL63 1104 aa23.9■■□□□ 1.42
CAPN3-209ENST00000466222 C20orf194Q5TEA3 1177 aa23.9■■□□□ 1.42
CAPN3-209ENST00000466222 SSH1Q8WYL5 1049 aa23.9■■□□□ 1.42
CAPN3-209ENST00000466222 PLEKHG2Q9H7P9 1386 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms