RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 PPIP5K1Q6PFW1 1433 aa10.96□□□□□ -0.66
SHQ1-203ENST00000463369 ANKARQ7Z5J8 1434 aa10.96□□□□□ -0.66
SHQ1-203ENST00000463369 PDE4DQ08499 809 aa10.96□□□□□ -0.66
SHQ1-203ENST00000463369 C19orf44Q9H6X5 657 aa10.96□□□□□ -0.66
SHQ1-203ENST00000463369 ANKRD36BQ8N2N9 1353 aa10.95□□□□□ -0.66
SHQ1-203ENST00000463369 ANKRD26Q9UPS8 1709 aa10.95□□□□□ -0.66
SHQ1-203ENST00000463369 PLEKHG3A1L390 1219 aa10.95□□□□□ -0.66
SHQ1-203ENST00000463369 TPM2P07951 284 aa10.95□□□□□ -0.66
SHQ1-203ENST00000463369 MRE11P49959 708 aa10.95□□□□□ -0.66
SHQ1-203ENST00000463369 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.95□□□□□ -0.66
SHQ1-203ENST00000463369 CABP1Q9NZU7 370 aa10.95□□□□□ -0.66
SHQ1-203ENST00000463369 ESPNB1AK53 854 aa10.94□□□□□ -0.66
SHQ1-203ENST00000463369 SEC24BO95487 1268 aa10.94□□□□□ -0.66
SHQ1-203ENST00000463369 ARIH1Q9Y4X5 557 aaPredicted RBP10.94□□□□□ -0.66
SHQ1-203ENST00000463369 DCCP43146 1447 aa10.94□□□□□ -0.66
SHQ1-203ENST00000463369 LTBP4Q8N2S1 1624 aa10.94□□□□□ -0.66
SHQ1-203ENST00000463369 MCM4P33991 863 aa10.94□□□□□ -0.66
SHQ1-203ENST00000463369 STK25O00506 426 aa10.93□□□□□ -0.66
SHQ1-203ENST00000463369 DUSP27Q5VZP5 1158 aa10.93□□□□□ -0.66
SHQ1-203ENST00000463369 CARD14Q9BXL6 1004 aa10.93□□□□□ -0.66
SHQ1-203ENST00000463369 TERF2IPQ9NYB0 399 aa10.93□□□□□ -0.66
SHQ1-203ENST00000463369 CPSF1Q10570 1443 aaKnown RBP10.93□□□□□ -0.66
SHQ1-203ENST00000463369 A0A1W2PP64 1363 aa10.93□□□□□ -0.66
SHQ1-203ENST00000463369 NUTM2FA1L443 756 aa10.93□□□□□ -0.66
SHQ1-203ENST00000463369 CALD1Q05682 793 aaKnown RBP10.93□□□□□ -0.66
SHQ1-203ENST00000463369 MYH16Q9H6N6 1097 aa10.93□□□□□ -0.66
SHQ1-203ENST00000463369 KNSTRNQ9Y448 316 aa10.93□□□□□ -0.66
SHQ1-203ENST00000463369 NRKQ7Z2Y5 1582 aa10.92□□□□□ -0.66
SHQ1-203ENST00000463369 MSH6P52701 1360 aa10.92□□□□□ -0.66
SHQ1-203ENST00000463369 KIF1AQ12756 1690 aa10.92□□□□□ -0.66
SHQ1-203ENST00000463369 TRIM66O15016 1216 aa10.91□□□□□ -0.66
SHQ1-203ENST00000463369 HDGFL2Q7Z4V5 671 aaPredicted RBP10.91□□□□□ -0.66
SHQ1-203ENST00000463369 ARHGEF1Q92888 912 aaKnown RBP10.91□□□□□ -0.66
SHQ1-203ENST00000463369 NPC1L1Q9UHC9 1359 aa10.91□□□□□ -0.66
SHQ1-203ENST00000463369 ERBB4Q15303 1308 aa10.91□□□□□ -0.66
SHQ1-203ENST00000463369 NSD3Q9BZ95 1437 aa10.91□□□□□ -0.66
SHQ1-203ENST00000463369 ISY1Q9ULR0 285 aaKnown RBP10.91□□□□□ -0.66
SHQ1-203ENST00000463369 ATF3P18847 181 aa10.9□□□□□ -0.66
SHQ1-203ENST00000463369 SPATA32Q96LK8 384 aa10.9□□□□□ -0.66
SHQ1-203ENST00000463369 TBC1D2Q9BYX2 928 aa10.9□□□□□ -0.66
SHQ1-203ENST00000463369 GRPEL1Q9HAV7 217 aa10.9□□□□□ -0.66
SHQ1-203ENST00000463369 PRDM4Q9UKN5 801 aa10.9□□□□□ -0.66
SHQ1-203ENST00000463369 POLR3AO14802 1390 aaPredicted RBP10.9□□□□□ -0.66
SHQ1-203ENST00000463369 MAPK8IP3Q9UPT6 1336 aa10.9□□□□□ -0.66
SHQ1-203ENST00000463369 MST1RQ04912 1400 aa10.9□□□□□ -0.67
SHQ1-203ENST00000463369 IGHDP01880 384 aa10.89□□□□□ -0.67
SHQ1-203ENST00000463369 C1orf167Q5SNV9 1468 aa10.89□□□□□ -0.67
SHQ1-203ENST00000463369 ACEP12821 1306 aa10.89□□□□□ -0.67
SHQ1-203ENST00000463369 MAP2P11137 1827 aaKnown RBP10.89□□□□□ -0.67
SHQ1-203ENST00000463369 EDC4Q6P2E9 1401 aaKnown RBP10.89□□□□□ -0.67
SHQ1-203ENST00000463369 TBC1D32Q96NH3 1257 aa10.88□□□□□ -0.67
SHQ1-203ENST00000463369 ZNF521Q96K83 1311 aa10.88□□□□□ -0.67
SHQ1-203ENST00000463369 GOLGA2Q08379 1002 aa10.88□□□□□ -0.67
SHQ1-203ENST00000463369 TEX2Q8IWB9 1127 aa10.88□□□□□ -0.67
SHQ1-203ENST00000463369 FNBP4Q8N3X1 1017 aaPredicted RBP10.88□□□□□ -0.67
SHQ1-203ENST00000463369 KRI1Q8N9T8 703 aaKnown RBP10.88□□□□□ -0.67
SHQ1-203ENST00000463369 PMFBP1Q8TBY8 1022 aa10.88□□□□□ -0.67
SHQ1-203ENST00000463369 POM121Q96HA1 1249 aa10.88□□□□□ -0.67
SHQ1-203ENST00000463369 ADAMTS8Q9UP79 889 aa10.88□□□□□ -0.67
SHQ1-203ENST00000463369 PHF8Q9UPP1 1060 aa10.88□□□□□ -0.67
SHQ1-203ENST00000463369 CGNL1Q0VF96 1302 aa10.87□□□□□ -0.67
SHQ1-203ENST00000463369 ESCO1Q5FWF5 840 aa10.87□□□□□ -0.67
SHQ1-203ENST00000463369 CC2D1BQ5T0F9 858 aaKnown RBP10.87□□□□□ -0.67
SHQ1-203ENST00000463369 TRIM44Q96DX7 344 aaPredicted RBP10.87□□□□□ -0.67
SHQ1-203ENST00000463369 PRDM10Q9NQV6 1147 aa10.87□□□□□ -0.67
SHQ1-203ENST00000463369 USP6P35125 1406 aa10.87□□□□□ -0.67
SHQ1-203ENST00000463369 NSD2O96028 1365 aa10.87□□□□□ -0.67
SHQ1-203ENST00000463369 NGDNQ8NEJ9 315 aaKnown RBP10.86□□□□□ -0.67
SHQ1-203ENST00000463369 UPF2Q9HAU5 1272 aaKnown RBP10.86□□□□□ -0.67
SHQ1-203ENST00000463369 TRPM3Q9HCF6 1732 aaPredicted RBP10.86□□□□□ -0.67
SHQ1-203ENST00000463369 USP54Q70EL1 1684 aa10.86□□□□□ -0.67
SHQ1-203ENST00000463369 MARF1Q9Y4F3 1742 aaKnown RBP10.86□□□□□ -0.67
SHQ1-203ENST00000463369 SSH2Q76I76 1423 aa10.86□□□□□ -0.67
SHQ1-203ENST00000463369 MCM6Q14566 821 aa10.86□□□□□ -0.67
SHQ1-203ENST00000463369 ORAI2Q96SN7 254 aa10.86□□□□□ -0.67
SHQ1-203ENST00000463369 CHMP5Q9NZZ3 219 aa10.86□□□□□ -0.67
SHQ1-203ENST00000463369 CANXP27824 592 aaKnown RBP10.85□□□□□ -0.67
SHQ1-203ENST00000463369 RBM10P98175 930 aaKnown RBP10.85□□□□□ -0.67
SHQ1-203ENST00000463369 SLFN5Q08AF3 891 aa10.85□□□□□ -0.67
SHQ1-203ENST00000463369 ANKRD13AQ8IZ07 590 aa10.85□□□□□ -0.67
SHQ1-203ENST00000463369 TRMT2AQ8IZ69 625 aaKnown RBP10.85□□□□□ -0.67
SHQ1-203ENST00000463369 PIK3C2AO00443 1686 aa10.85□□□□□ -0.67
SHQ1-203ENST00000463369 FYB1O15117 783 aa10.85□□□□□ -0.67
SHQ1-203ENST00000463369 KIAA1211Q6ZU35 1233 aa10.85□□□□□ -0.67
SHQ1-203ENST00000463369 LOC102724159A0A0B4J2E5 919 aa10.84□□□□□ -0.67
SHQ1-203ENST00000463369 BRD1O95696 1058 aa10.84□□□□□ -0.67
SHQ1-203ENST00000463369 PWP2Q15269 919 aaKnown RBP10.84□□□□□ -0.67
SHQ1-203ENST00000463369 NOL8Q76FK4 1167 aaKnown RBP10.84□□□□□ -0.67
SHQ1-203ENST00000463369 NHSL1Q5SYE7 1610 aa10.83□□□□□ -0.68
SHQ1-203ENST00000463369 DDX11L8A8MPP1 907 aa10.83□□□□□ -0.68
SHQ1-203ENST00000463369 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.83□□□□□ -0.683e-6■■□□□ 12.2
SHQ1-203ENST00000463369 SLAIN2Q9P270 581 aa10.83□□□□□ -0.68
SHQ1-203ENST00000463369 TTC21BQ7Z4L5 1316 aa10.83□□□□□ -0.68
SHQ1-203ENST00000463369 ALS2Q96Q42 1657 aa10.83□□□□□ -0.68
SHQ1-203ENST00000463369 TERF1P54274 439 aa10.83□□□□□ -0.68
SHQ1-203ENST00000463369 TTC21AQ8NDW8 1320 aa10.83□□□□□ -0.68
SHQ1-203ENST00000463369 PSME1Q06323 249 aa10.82□□□□□ -0.68
SHQ1-203ENST00000463369 PLSCR2Q9NRY7 297 aa10.82□□□□□ -0.68
SHQ1-203ENST00000463369 RIOK3O14730 519 aaKnown RBP10.81□□□□□ -0.68
SHQ1-203ENST00000463369 FOXO3O43524 673 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms