RNA–Protein interactions for RNA: ENST00000461055.2

NEDD9-206, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-206ENST00000461055 ALDH1L2Q3SY69 923 aa14.2□□□□□ -0.14
NEDD9-206ENST00000461055 CCDC125Q86Z20 511 aa14.2□□□□□ -0.14
NEDD9-206ENST00000461055 EXOC6Q8TAG9 804 aa14.2□□□□□ -0.14
NEDD9-206ENST00000461055 CCDC9Q9Y3X0 531 aaKnown RBP14.2□□□□□ -0.14
NEDD9-206ENST00000461055 GLI3P10071 1580 aa14.2□□□□□ -0.14
NEDD9-206ENST00000461055 MARF1Q9Y4F3 1742 aaKnown RBP14.2□□□□□ -0.14
NEDD9-206ENST00000461055 SLIT3O75094 1523 aa14.2□□□□□ -0.14
NEDD9-206ENST00000461055 SOX12O15370 315 aa14.19□□□□□ -0.14
NEDD9-206ENST00000461055 GCP02774 474 aa14.19□□□□□ -0.14
NEDD9-206ENST00000461055 ZNF853P0CG23 659 aa14.19□□□□□ -0.14
NEDD9-206ENST00000461055 BRPF1P55201 1214 aaPredicted RBP14.19□□□□□ -0.14
NEDD9-206ENST00000461055 B4GALNT3Q6L9W6 998 aa14.19□□□□□ -0.14
NEDD9-206ENST00000461055 CFAP44Q96MT7 982 aa14.19□□□□□ -0.14
NEDD9-206ENST00000461055 EYA1Q99502 592 aa14.19□□□□□ -0.14
NEDD9-206ENST00000461055 NFAT5O94916 1531 aa14.19□□□□□ -0.14
NEDD9-206ENST00000461055 IPO8O15397 1037 aaKnown RBP14.18□□□□□ -0.14
NEDD9-206ENST00000461055 PLIN1O60240 522 aa14.18□□□□□ -0.14
NEDD9-206ENST00000461055 CANXP27824 592 aaKnown RBP14.18□□□□□ -0.14
NEDD9-206ENST00000461055 FAM182BQ5T319 152 aa14.18□□□□□ -0.14
NEDD9-206ENST00000461055 NUTM2GQ5VZR2 741 aa14.18□□□□□ -0.14
NEDD9-206ENST00000461055 BCAR3O75815 825 aa14.17□□□□□ -0.14
NEDD9-206ENST00000461055 EXOSC9Q06265 439 aaKnown RBP14.17□□□□□ -0.14
NEDD9-206ENST00000461055 VPS72Q15906 364 aa14.17□□□□□ -0.14
NEDD9-206ENST00000461055 ARHGEF25Q86VW2 580 aa14.17□□□□□ -0.14
NEDD9-206ENST00000461055 RTF1Q92541 710 aaKnown RBP14.17□□□□□ -0.14
NEDD9-206ENST00000461055 CRBNQ96SW2 442 aa14.17□□□□□ -0.14
NEDD9-206ENST00000461055 TRPM3Q9HCF6 1732 aaPredicted RBP14.17□□□□□ -0.14
NEDD9-206ENST00000461055 BRWD3Q6RI45 1802 aa14.17□□□□□ -0.14
NEDD9-206ENST00000461055 PSDA5PKW4 1024 aaPredicted RBP14.16□□□□□ -0.14
NEDD9-206ENST00000461055 BABAM1Q9NWV8 329 aa14.16□□□□□ -0.14
NEDD9-206ENST00000461055 ONECUT3O60422 494 aaPredicted RBP14.15□□□□□ -0.14
NEDD9-206ENST00000461055 AEBP1Q8IUX7 1158 aa14.15□□□□□ -0.14
NEDD9-206ENST00000461055 KIF16BQ96L93 1317 aa14.15□□□□□ -0.15
NEDD9-206ENST00000461055 PLEKHG2Q9H7P9 1386 aa14.14□□□□□ -0.15
NEDD9-206ENST00000461055 FAM98CQ17RN3 349 aaKnown RBP14.14□□□□□ -0.15
NEDD9-206ENST00000461055 ZKSCAN2Q63HK3 967 aa14.14□□□□□ -0.15
NEDD9-206ENST00000461055 KRT27Q7Z3Y8 459 aa14.14□□□□□ -0.15
NEDD9-206ENST00000461055 TSR2Q969E8 191 aaKnown RBP14.14□□□□□ -0.15
NEDD9-206ENST00000461055 ABCC6O95255 1503 aa14.14□□□□□ -0.15
NEDD9-206ENST00000461055 A0A0G2JS52 829 aa14.13□□□□□ -0.15
NEDD9-206ENST00000461055 CHL1O00533 1208 aa14.13□□□□□ -0.15
NEDD9-206ENST00000461055 MYT1Q01538 1121 aa14.13□□□□□ -0.15
NEDD9-206ENST00000461055 ARHGAP45Q92619 1136 aa14.13□□□□□ -0.15
NEDD9-206ENST00000461055 CHMP4BQ9H444 224 aaKnown RBP14.13□□□□□ -0.15
NEDD9-206ENST00000461055 SMC4Q9NTJ3 1288 aa14.13□□□□□ -0.15
NEDD9-206ENST00000461055 TNS3Q68CZ2 1445 aa14.13□□□□□ -0.15
NEDD9-206ENST00000461055 ALS2Q96Q42 1657 aa14.13□□□□□ -0.15
NEDD9-206ENST00000461055 SOS1Q07889 1333 aaPredicted RBP14.13□□□□□ -0.15
NEDD9-206ENST00000461055 KIAA0232Q92628 1395 aa14.12□□□□□ -0.15
NEDD9-206ENST00000461055 AMOTQ4VCS5 1084 aa14.12□□□□□ -0.15
NEDD9-206ENST00000461055 CHMP4AQ9BY43 222 aa14.12□□□□□ -0.15
NEDD9-206ENST00000461055 BTG4Q9NY30 223 aa14.12□□□□□ -0.15
NEDD9-206ENST00000461055 LTN1O94822 1766 aa14.11□□□□□ -0.15
NEDD9-206ENST00000461055 GNAT3A8MTJ3 354 aa14.11□□□□□ -0.15
NEDD9-206ENST00000461055 SF3B2Q13435 895 aaKnown RBP14.11□□□□□ -0.15
NEDD9-206ENST00000461055 MTHFSDQ2M296 383 aaKnown RBP14.11□□□□□ -0.15
NEDD9-206ENST00000461055 C20orf194Q5TEA3 1177 aa14.11□□□□□ -0.15
NEDD9-206ENST00000461055 CENPQQ7L2Z9 268 aaPredicted RBP14.11□□□□□ -0.15
NEDD9-206ENST00000461055 MBIPQ9NS73 344 aa14.11□□□□□ -0.15
NEDD9-206ENST00000461055 LAS1LQ9Y4W2 734 aaKnown RBP14.11□□□□□ -0.15
NEDD9-206ENST00000461055 DLG5Q8TDM6 1919 aa14.1□□□□□ -0.15
NEDD9-206ENST00000461055 NCAPD2Q15021 1401 aa14.1□□□□□ -0.15
NEDD9-206ENST00000461055 VAMP4O75379 141 aa14.1□□□□□ -0.15
NEDD9-206ENST00000461055 EN1Q05925 392 aaPredicted RBP14.1□□□□□ -0.15
NEDD9-206ENST00000461055 PIAS4Q8N2W9 510 aaPredicted RBP14.1□□□□□ -0.15
NEDD9-206ENST00000461055 FRAT1Q92837 279 aaPredicted RBP14.1□□□□□ -0.15
NEDD9-206ENST00000461055 MSH5O43196 834 aa14.09□□□□□ -0.15
NEDD9-206ENST00000461055 PLEKHO1Q53GL0 409 aaPredicted RBP14.09□□□□□ -0.15
NEDD9-206ENST00000461055 ATF7IPQ6VMQ6 1270 aa14.09□□□□□ -0.15
NEDD9-206ENST00000461055 FTSJ3Q8IY81 847 aaKnown RBP14.09□□□□□ -0.15
NEDD9-206ENST00000461055 DZIP1LQ8IYY4 767 aaKnown RBP14.09□□□□□ -0.15
NEDD9-206ENST00000461055 SSH1Q8WYL5 1049 aa14.09□□□□□ -0.15
NEDD9-206ENST00000461055 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.09□□□□□ -0.15
NEDD9-206ENST00000461055 CPDO75976 1380 aa14.09□□□□□ -0.15
NEDD9-206ENST00000461055 ADRA2BP18089 450 aa14.08□□□□□ -0.16
NEDD9-206ENST00000461055 TWISTNBQ3B726 338 aaPredicted RBP14.08□□□□□ -0.16
NEDD9-206ENST00000461055 LTV1Q96GA3 475 aaPredicted RBP14.08□□□□□ -0.16
NEDD9-206ENST00000461055 MAP3K5Q99683 1374 aa14.08□□□□□ -0.16
NEDD9-206ENST00000461055 CRB1P82279 1406 aa14.07□□□□□ -0.16
NEDD9-206ENST00000461055 CHRNA2Q15822 529 aa14.07□□□□□ -0.16
NEDD9-206ENST00000461055 ANKRD24Q8TF21 1146 aa14.07□□□□□ -0.16
NEDD9-206ENST00000461055 CLUAP1Q96AJ1 413 aa14.07□□□□□ -0.16
NEDD9-206ENST00000461055 TCERG1O14776 1098 aaKnown RBP14.06□□□□□ -0.16
NEDD9-206ENST00000461055 MVPQ14764 893 aaKnown RBP14.06□□□□□ -0.16
NEDD9-206ENST00000461055 NBPF6Q5VWK0 638 aa14.06□□□□□ -0.16
NEDD9-206ENST00000461055 NBPF4Q96M43 638 aa14.06□□□□□ -0.16
NEDD9-206ENST00000461055 THUMPD2Q9BTF0 503 aaKnown RBP14.06□□□□□ -0.16
NEDD9-206ENST00000461055 TSHZ2Q9NRE2 1034 aa14.06□□□□□ -0.16
NEDD9-206ENST00000461055 DDX19BQ9UMR2 479 aa14.06□□□□□ -0.16
NEDD9-206ENST00000461055 PLCH1Q4KWH8 1693 aa14.05□□□□□ -0.16
NEDD9-206ENST00000461055 AKAP4Q5JQC9 854 aa14.05□□□□□ -0.16
NEDD9-206ENST00000461055 MCM10Q7L590 875 aa14.05□□□□□ -0.16
NEDD9-206ENST00000461055 API5Q9BZZ5 524 aaKnown RBP14.05□□□□□ -0.16
NEDD9-206ENST00000461055 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.05□□□□□ -0.16
NEDD9-206ENST00000461055 DCTN1Q14203 1278 aa14.04□□□□□ -0.16
NEDD9-206ENST00000461055 R3HDM1Q15032 1099 aaKnown RBP14.04□□□□□ -0.16
NEDD9-206ENST00000461055 TAF7Q15545 349 aaPredicted RBP14.04□□□□□ -0.16
NEDD9-206ENST00000461055 MRPL50Q8N5N7 158 aaKnown RBP14.04□□□□□ -0.16
NEDD9-206ENST00000461055 PANK1Q8TE04 598 aa14.04□□□□□ -0.16
NEDD9-206ENST00000461055 NOB1Q9ULX3 412 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms