RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 TMEM2Q9UHN6 1383 aa8.46□□□□□ -1.06
NUP98-208ENST00000461047 ADH1BP00325 375 aa8.45□□□□□ -1.06
NUP98-208ENST00000461047 SPHKAPQ2M3C7 1700 aa8.45□□□□□ -1.06
NUP98-208ENST00000461047 SYNMO15061 1565 aa8.44□□□□□ -1.06
NUP98-208ENST00000461047 ATP6V1AP38606 617 aa8.44□□□□□ -1.06
NUP98-208ENST00000461047 GCGRP47871 477 aa8.44□□□□□ -1.06
NUP98-208ENST00000461047 FUT2Q10981 343 aa8.44□□□□□ -1.06
NUP98-208ENST00000461047 LAPTM4AQ15012 233 aa8.44□□□□□ -1.06
NUP98-208ENST00000461047 L3MBTL2Q969R5 705 aa8.44□□□□□ -1.06
NUP98-208ENST00000461047 CCDC102AQ96A19 550 aa8.44□□□□□ -1.06
NUP98-208ENST00000461047 RIMS2Q9UQ26 1411 aa8.44□□□□□ -1.06
NUP98-208ENST00000461047 CEP170BQ9Y4F5 1589 aaPredicted RBP8.44□□□□□ -1.06
NUP98-208ENST00000461047 S1PR4O95977 384 aa8.43□□□□□ -1.06
NUP98-208ENST00000461047 HSPA2P54652 639 aa8.43□□□□□ -1.06
NUP98-208ENST00000461047 MDM2Q00987 491 aaPredicted RBP8.43□□□□□ -1.06
NUP98-208ENST00000461047 SPSB2Q99619 263 aa8.43□□□□□ -1.06
NUP98-208ENST00000461047 SLC6A16Q9GZN6 736 aa8.43□□□□□ -1.06
NUP98-208ENST00000461047 ADGRB3O60242 1522 aa8.43□□□□□ -1.06
NUP98-208ENST00000461047 RNF223E7ERA6 249 aa8.42□□□□□ -1.06
NUP98-208ENST00000461047 NUTM2DQ5VT03 806 aaPredicted RBP8.42□□□□□ -1.06
NUP98-208ENST00000461047 Q6ZNB5 142 aa8.42□□□□□ -1.06
NUP98-208ENST00000461047 SPATA31E1Q6ZUB1 1445 aa8.42□□□□□ -1.06
NUP98-208ENST00000461047 NEURL4Q96JN8 1562 aa8.42□□□□□ -1.06
NUP98-208ENST00000461047 MYO3AQ8NEV4 1616 aa8.42□□□□□ -1.06
NUP98-208ENST00000461047 CFAP65Q6ZU64 1925 aaKnown RBP8.42□□□□□ -1.06
NUP98-208ENST00000461047 PIK3C2BO00750 1634 aa8.41□□□□□ -1.06
NUP98-208ENST00000461047 CLTCL1P53675 1640 aa8.41□□□□□ -1.06
NUP98-208ENST00000461047 ZFYVE9O95405 1425 aa8.41□□□□□ -1.06
NUP98-208ENST00000461047 CLCN1P35523 988 aa8.41□□□□□ -1.06
NUP98-208ENST00000461047 MORN1Q5T089 497 aa8.41□□□□□ -1.06
NUP98-208ENST00000461047 ANKLE1Q8NAG6 615 aa8.41□□□□□ -1.06
NUP98-208ENST00000461047 KDM5AP29375 1690 aaKnown RBP8.4□□□□□ -1.06
NUP98-208ENST00000461047 SCAF11Q99590 1463 aaKnown RBP8.4□□□□□ -1.06
NUP98-208ENST00000461047 PLEKHG1Q9ULL1 1385 aa8.4□□□□□ -1.06
NUP98-208ENST00000461047 GFRA3O60609 400 aa8.4□□□□□ -1.06
NUP98-208ENST00000461047 FMNL1O95466 1100 aaPredicted RBP8.4□□□□□ -1.06
NUP98-208ENST00000461047 LTKP29376 864 aa8.4□□□□□ -1.06
NUP98-208ENST00000461047 TBX22Q9Y458 520 aa8.4□□□□□ -1.06
NUP98-208ENST00000461047 KIF1BO60333 1816 aa8.4□□□□□ -1.07
NUP98-208ENST00000461047 TMEM131LA2VDJ0 1609 aa8.4□□□□□ -1.07
NUP98-208ENST00000461047 SLIT1O75093 1534 aa8.39□□□□□ -1.07
NUP98-208ENST00000461047 LMTK3Q96Q04 1460 aa8.39□□□□□ -1.07
NUP98-208ENST00000461047 SLC19A1P41440 591 aa8.39□□□□□ -1.07
NUP98-208ENST00000461047 GPCPD1Q9NPB8 672 aa8.39□□□□□ -1.07
NUP98-208ENST00000461047 ARHGAP23Q9P227 1491 aa8.38□□□□□ -1.07
NUP98-208ENST00000461047 NPHP4O75161 1426 aaPredicted RBP8.38□□□□□ -1.07
NUP98-208ENST00000461047 ADGRF5Q8IZF2 1346 aa8.38□□□□□ -1.07
NUP98-208ENST00000461047 ZNF142P52746 1687 aaPredicted RBP8.38□□□□□ -1.07
NUP98-208ENST00000461047 PPEF1O14829 653 aaPredicted RBP8.38□□□□□ -1.07
NUP98-208ENST00000461047 CD46P15529 392 aa8.38□□□□□ -1.07
NUP98-208ENST00000461047 C14orf93Q9H972 538 aaKnown RBP8.38□□□□□ -1.07
NUP98-208ENST00000461047 SLC27A5Q9Y2P5 690 aa8.38□□□□□ -1.07
NUP98-208ENST00000461047 UBR1Q8IWV7 1749 aa8.37□□□□□ -1.07
NUP98-208ENST00000461047 KDM4AO75164 1064 aa8.37□□□□□ -1.07
NUP98-208ENST00000461047 Q3C1V9 767 aa8.37□□□□□ -1.07
NUP98-208ENST00000461047 SLC26A8Q96RN1 970 aa8.37□□□□□ -1.07
NUP98-208ENST00000461047 MYOM2P54296 1465 aa8.37□□□□□ -1.07
NUP98-208ENST00000461047 SLC24A1O60721 1099 aa8.36□□□□□ -1.07
NUP98-208ENST00000461047 USP46P62068 366 aa8.36□□□□□ -1.07
NUP98-208ENST00000461047 CFAP70Q5T0N1 1121 aa8.36□□□□□ -1.07
NUP98-208ENST00000461047 BARGINQ6ZT62 677 aa8.36□□□□□ -1.07
NUP98-208ENST00000461047 PDZRN3Q9UPQ7 1066 aa8.36□□□□□ -1.07
NUP98-208ENST00000461047 MED14O60244 1454 aa8.36□□□□□ -1.07
NUP98-208ENST00000461047 PIK3R4Q99570 1358 aa8.35□□□□□ -1.07
NUP98-208ENST00000461047 NRG2O14511 850 aaPredicted RBP8.35□□□□□ -1.07
NUP98-208ENST00000461047 TTLL12Q14166 644 aaPredicted RBP8.35□□□□□ -1.07
NUP98-208ENST00000461047 NUTM1Q86Y26 1132 aa8.35□□□□□ -1.07
NUP98-208ENST00000461047 ZC3H15Q8WU90 426 aaKnown RBP8.35□□□□□ -1.07
NUP98-208ENST00000461047 CARD11Q9BXL7 1154 aa8.35□□□□□ -1.07
NUP98-208ENST00000461047 SALL2Q9Y467 1007 aaPredicted RBP8.35□□□□□ -1.07
NUP98-208ENST00000461047 ROCK2O75116 1388 aaKnown RBP8.35□□□□□ -1.07
NUP98-208ENST00000461047 NEXMIFQ5QGS0 1516 aa8.34□□□□□ -1.07
NUP98-208ENST00000461047 ZMYND10O75800 440 aa8.34□□□□□ -1.07
NUP98-208ENST00000461047 KCNA6P17658 529 aa8.34□□□□□ -1.07
NUP98-208ENST00000461047 POGKQ9P215 609 aa8.34□□□□□ -1.07
NUP98-208ENST00000461047 STK26Q9P289 416 aa8.34□□□□□ -1.07
NUP98-208ENST00000461047 PRAG1Q86YV5 1406 aa8.34□□□□□ -1.07
NUP98-208ENST00000461047 PIK3C2GO75747 1445 aa8.33□□□□□ -1.08
NUP98-208ENST00000461047 SIRT1Q96EB6 747 aa8.33□□□□□ -1.08
NUP98-208ENST00000461047 THAP11Q96EK4 314 aa8.33□□□□□ -1.08
NUP98-208ENST00000461047 FAM217BQ9NTX9 383 aaPredicted RBP8.33□□□□□ -1.08
NUP98-208ENST00000461047 AMOTL2Q9Y2J4 779 aa8.33□□□□□ -1.08
NUP98-208ENST00000461047 NRXN1Q9ULB1 1477 aa8.32□□□□□ -1.08
NUP98-208ENST00000461047 NBPF8Q3BBV2 869 aa8.32□□□□□ -1.08
NUP98-208ENST00000461047 SPRYD7Q5W111 196 aa8.32□□□□□ -1.08
NUP98-208ENST00000461047 TMEM132EQ6IEE7 984 aa8.32□□□□□ -1.08
NUP98-208ENST00000461047 BRICD5Q6PL45 260 aa8.32□□□□□ -1.08
NUP98-208ENST00000461047 C14orf37Q86TY3 774 aa8.32□□□□□ -1.08
NUP98-208ENST00000461047 ZNF598Q86UK7 904 aaKnown RBP8.32□□□□□ -1.08
NUP98-208ENST00000461047 PROSER2Q86WR7 435 aaPredicted RBP8.32□□□□□ -1.08
NUP98-208ENST00000461047 EIF3AQ14152 1382 aaKnown RBP8.32□□□□□ -1.08
NUP98-208ENST00000461047 DIP2AQ14689 1571 aa8.31□□□□□ -1.08
NUP98-208ENST00000461047 EIF4G2P78344 907 aaKnown RBP eCLIP8.31□□□□□ -1.08
NUP98-208ENST00000461047 ZNF697Q5TEC3 545 aa8.31□□□□□ -1.08
NUP98-208ENST00000461047 FCF1Q9Y324 198 aaKnown RBP8.31□□□□□ -1.08
NUP98-208ENST00000461047 LRPPRCP42704 1394 aaKnown RBP8.31□□□□□ -1.08
NUP98-208ENST00000461047 SETBP1Q9Y6X0 1596 aa8.31□□□□□ -1.08
NUP98-208ENST00000461047 ZBTB24O43167 697 aaPredicted RBP8.3□□□□□ -1.08
NUP98-208ENST00000461047 NBPF1Q3BBV0 1214 aa8.3□□□□□ -1.08
NUP98-208ENST00000461047 MSS51Q4VC12 460 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms