RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 OVOS2Q6IE36 1432 aa22.65■■□□□ 1.22
HPS3-202ENST00000460120 RBM42Q9BTD8 480 aaKnown RBP22.65■■□□□ 1.22
HPS3-202ENST00000460120 TSPYL4Q9UJ04 414 aa22.65■■□□□ 1.22
HPS3-202ENST00000460120 NLRP6P59044 892 aa22.64■■□□□ 1.22
HPS3-202ENST00000460120 MEIS3Q99687 375 aa22.64■■□□□ 1.22
HPS3-202ENST00000460120 AKAP12Q02952 1782 aa22.64■■□□□ 1.21
HPS3-202ENST00000460120 ZBTB7CA1YPR0 619 aa22.63■■□□□ 1.21
HPS3-202ENST00000460120 G2E3Q7L622 706 aa22.63■■□□□ 1.21
HPS3-202ENST00000460120 KNDC1Q76NI1 1749 aa22.62■■□□□ 1.21
HPS3-202ENST00000460120 MSH6P52701 1360 aa22.62■■□□□ 1.21
HPS3-202ENST00000460120 EYA1Q99502 592 aa22.61■■□□□ 1.21
HPS3-202ENST00000460120 HSP90AB1P08238 724 aaKnown RBP22.61■■□□□ 1.21
HPS3-202ENST00000460120 GSPT1P15170 499 aaKnown RBP22.61■■□□□ 1.21
HPS3-202ENST00000460120 PEAK1Q9H792 1746 aa22.6■■□□□ 1.21
HPS3-202ENST00000460120 CD2BP2O95400 341 aaKnown RBP22.6■■□□□ 1.21
HPS3-202ENST00000460120 USHBP1Q8N6Y0 703 aa22.59■■□□□ 1.21
HPS3-202ENST00000460120 HSP90AA1P07900 732 aaKnown RBP22.59■■□□□ 1.21
HPS3-202ENST00000460120 PLEKHM2Q8IWE5 1019 aa22.59■■□□□ 1.21
HPS3-202ENST00000460120 CHMP5Q9NZZ3 219 aa22.59■■□□□ 1.21
HPS3-202ENST00000460120 RIMS1Q86UR5 1692 aaKnown RBP22.58■■□□□ 1.21
HPS3-202ENST00000460120 RBM25P49756 843 aaKnown RBP22.58■■□□□ 1.21
HPS3-202ENST00000460120 INTS3Q68E01 1043 aaKnown RBP22.58■■□□□ 1.21
HPS3-202ENST00000460120 KCNA6P17658 529 aa22.58■■□□□ 1.2
HPS3-202ENST00000460120 CEP85Q6P2H3 762 aa22.57■■□□□ 1.2
HPS3-202ENST00000460120 MCM4P33991 863 aa22.56■■□□□ 1.2
HPS3-202ENST00000460120 DCTPP1Q9H773 170 aa22.56■■□□□ 1.2
HPS3-202ENST00000460120 KIF2CQ99661 725 aa22.55■■□□□ 1.2
HPS3-202ENST00000460120 RGS12O14924 1447 aa22.55■■□□□ 1.2
HPS3-202ENST00000460120 CDC45O75419 566 aa22.55■■□□□ 1.2
HPS3-202ENST00000460120 ANKRD44Q8N8A2 993 aa22.55■■□□□ 1.2
HPS3-202ENST00000460120 ABTB2Q8N961 1025 aa22.55■■□□□ 1.2
HPS3-202ENST00000460120 NRKQ7Z2Y5 1582 aa22.54■■□□□ 1.2
HPS3-202ENST00000460120 CRB1P82279 1406 aa22.54■■□□□ 1.2
HPS3-202ENST00000460120 FLT4P35916 1363 aa22.54■■□□□ 1.2
HPS3-202ENST00000460120 USP31Q70CQ4 1352 aa22.54■■□□□ 1.2
HPS3-202ENST00000460120 TSHZ3Q63HK5 1081 aa22.53■■□□□ 1.2
HPS3-202ENST00000460120 TBX22Q9Y458 520 aa22.52■■□□□ 1.2
HPS3-202ENST00000460120 TTC21AQ8NDW8 1320 aa22.52■■□□□ 1.2
HPS3-202ENST00000460120 CEP170BQ9Y4F5 1589 aaPredicted RBP22.52■■□□□ 1.2
HPS3-202ENST00000460120 SBNO1A3KN83 1393 aa22.52■■□□□ 1.2
HPS3-202ENST00000460120 RTL1A6NKG5 1358 aa22.52■■□□□ 1.2
HPS3-202ENST00000460120 HAP1P54257 671 aaPredicted RBP22.51■■□□□ 1.19
HPS3-202ENST00000460120 THEMISQ8N1K5 641 aaPredicted RBP22.51■■□□□ 1.19
HPS3-202ENST00000460120 ATP10DQ9P241 1426 aa22.51■■□□□ 1.19
HPS3-202ENST00000460120 TTC22Q5TAA0 569 aa22.51■■□□□ 1.19
HPS3-202ENST00000460120 SSH2Q76I76 1423 aa22.5■■□□□ 1.19
HPS3-202ENST00000460120 ARHGEF10O15013 1369 aa22.5■■□□□ 1.19
HPS3-202ENST00000460120 FKBP5Q13451 457 aaPredicted RBP22.5■■□□□ 1.19
HPS3-202ENST00000460120 EXOC6BQ9Y2D4 811 aa22.5■■□□□ 1.19
HPS3-202ENST00000460120 KIAA0232Q92628 1395 aa22.5■■□□□ 1.19
HPS3-202ENST00000460120 TOPAZ1Q8N9V7 1692 aa22.49■■□□□ 1.19
HPS3-202ENST00000460120 PTPRCP08575 1304 aa22.49■■□□□ 1.19
HPS3-202ENST00000460120 STK31Q9BXU1 1019 aa22.49■■□□□ 1.19
HPS3-202ENST00000460120 HOXC9P31274 260 aa22.49■■□□□ 1.19
HPS3-202ENST00000460120 RPAP2Q8IXW5 612 aaPredicted RBP22.49■■□□□ 1.19
HPS3-202ENST00000460120 RGPD8O14715 1765 aaPredicted RBP22.48■■□□□ 1.19
HPS3-202ENST00000460120 TRHP20396 242 aaPredicted RBP22.48■■□□□ 1.19
HPS3-202ENST00000460120 GAS2L2Q8NHY3 880 aa22.48■■□□□ 1.19
HPS3-202ENST00000460120 TRAK2O60296 914 aa22.47■■□□□ 1.19
HPS3-202ENST00000460120 SDSP20132 328 aa22.47■■□□□ 1.19
HPS3-202ENST00000460120 DIP2AQ14689 1571 aa22.47■■□□□ 1.19
HPS3-202ENST00000460120 IGSF1Q8N6C5 1336 aa22.47■■□□□ 1.19
HPS3-202ENST00000460120 SNX21Q969T3 373 aa22.46■■□□□ 1.19
HPS3-202ENST00000460120 GNAT3A8MTJ3 354 aa22.45■■□□□ 1.19
HPS3-202ENST00000460120 TNPO1Q92973 898 aaKnown RBP22.45■■□□□ 1.19
HPS3-202ENST00000460120 K7ELQ4 463 aaPredicted RBP22.44■■□□□ 1.18
HPS3-202ENST00000460120 XPCQ01831 940 aaPredicted RBP22.44■■□□□ 1.18
HPS3-202ENST00000460120 FLIIQ13045 1269 aa22.44■■□□□ 1.18
HPS3-202ENST00000460120 IL17REQ8NFR9 667 aa22.44■■□□□ 1.18
HPS3-202ENST00000460120 KIF24Q5T7B8 1368 aa22.44■■□□□ 1.18
HPS3-202ENST00000460120 EIF2S2P20042 333 aaKnown RBP22.42■■□□□ 1.18
HPS3-202ENST00000460120 RGPD1P0DJD0 1748 aa22.41■■□□□ 1.18
HPS3-202ENST00000460120 LMOD2Q6P5Q4 547 aa22.41■■□□□ 1.18
HPS3-202ENST00000460120 NALCNQ8IZF0 1738 aa22.41■■□□□ 1.18
HPS3-202ENST00000460120 CCT4P50991 539 aaKnown RBP22.41■■□□□ 1.18
HPS3-202ENST00000460120 KDRP35968 1356 aa22.4■■□□□ 1.18
HPS3-202ENST00000460120 HMMRO75330 724 aa22.4■■□□□ 1.18
HPS3-202ENST00000460120 GNAI2P04899 355 aa22.4■■□□□ 1.18
HPS3-202ENST00000460120 PNMA6EA0A0J9YXQ4 647 aa22.4■■□□□ 1.18
HPS3-202ENST00000460120 PIK3C2AO00443 1686 aa22.4■■□□□ 1.18
HPS3-202ENST00000460120 CCDC30Q5VVM6 783 aa22.39■■□□□ 1.18
HPS3-202ENST00000460120 PHAXQ9H814 394 aaKnown RBP22.39■■□□□ 1.18
HPS3-202ENST00000460120 GOLGA6L3A6NEY3 463 aa22.39■■□□□ 1.17
HPS3-202ENST00000460120 SSFA2P28290 1259 aa22.39■■□□□ 1.17
HPS3-202ENST00000460120 DDIT3P35638 169 aa22.39■■□□□ 1.17
HPS3-202ENST00000460120 ESCO1Q5FWF5 840 aa22.39■■□□□ 1.17
HPS3-202ENST00000460120 PANK2Q9BZ23 570 aa22.39■■□□□ 1.17
HPS3-202ENST00000460120 USP26Q9BXU7 913 aa22.38■■□□□ 1.17
HPS3-202ENST00000460120 PHF8Q9UPP1 1060 aa22.38■■□□□ 1.17
HPS3-202ENST00000460120 CASC1Q6TDU7 716 aa22.37■■□□□ 1.17
HPS3-202ENST00000460120 LRRFIP2Q9Y608 721 aaKnown RBP22.37■■□□□ 1.17
HPS3-202ENST00000460120 ARHGAP23Q9P227 1491 aa22.37■■□□□ 1.17
HPS3-202ENST00000460120 NCOA3Q9Y6Q9 1424 aa22.37■■□□□ 1.17
HPS3-202ENST00000460120 LRRC59Q96AG4 307 aaKnown RBP22.37■■□□□ 1.17
HPS3-202ENST00000460120 SLIT1O75093 1534 aa22.37■■□□□ 1.17
HPS3-202ENST00000460120 ANXA1P04083 346 aa22.37■■□□□ 1.17
HPS3-202ENST00000460120 HDGFL1Q5TGJ6 251 aa22.37■■□□□ 1.17
HPS3-202ENST00000460120 LGR6Q9HBX8 967 aa22.36■■□□□ 1.17
HPS3-202ENST00000460120 MAP3K5Q99683 1374 aa22.36■■□□□ 1.17
HPS3-202ENST00000460120 PSME1Q06323 249 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms