RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 GTF2IP78347 998 aa9.26□□□□□ -0.93
HMGB1P26-201ENST00000452520 NNTQ13423 1086 aa9.26□□□□□ -0.93
HMGB1P26-201ENST00000452520 ZNF784Q8NCA9 323 aaPredicted RBP9.26□□□□□ -0.93
HMGB1P26-201ENST00000452520 ESF1Q9H501 851 aaKnown RBP9.26□□□□□ -0.93
HMGB1P26-201ENST00000452520 DNAAF2Q9NVR5 837 aaKnown RBP9.26□□□□□ -0.93
HMGB1P26-201ENST00000452520 USP17L15C9J2P7 530 aa9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 USP17L10C9JJH3 530 aa9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 USP17L13C9JLJ4 530 aa9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 USP17L12C9JPN9 530 aa9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 USP17L11C9JVI0 530 aa9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 USP17L21D6R901 530 aa9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 USP17L18D6R9N7 530 aa9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 USP17L22D6RA61 530 aa9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 USP17L17D6RBQ6 530 aa9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 USP17L19D6RCP7 530 aa9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 USP17L20D6RJB6 530 aa9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 LILRA1O75019 489 aa9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 PDIA4P13667 645 aaKnown RBP9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 USP17L24Q0WX57 530 aa9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 CC2D2BQ6DHV5 1058 aa9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 LARGE2Q8N3Y3 721 aa9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 CYLDQ9NQC7 956 aa9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 NOVA2Q9UNW9 492 aaKnown RBP9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 EMILIN1Q9Y6C2 1016 aa9.25□□□□□ -0.93
HMGB1P26-201ENST00000452520 SMPD1P17405 629 aa9.24□□□□□ -0.93
HMGB1P26-201ENST00000452520 MYT1Q01538 1121 aa9.24□□□□□ -0.93
HMGB1P26-201ENST00000452520 PDE4CQ08493 712 aa9.24□□□□□ -0.93
HMGB1P26-201ENST00000452520 PGPEP1Q9NXJ5 209 aa9.24□□□□□ -0.93
HMGB1P26-201ENST00000452520 ZMIZ1Q9ULJ6 1067 aa9.24□□□□□ -0.93
HMGB1P26-201ENST00000452520 DKK1O94907 266 aa9.23□□□□□ -0.93
HMGB1P26-201ENST00000452520 ADD1P35611 737 aaKnown RBP9.23□□□□□ -0.93
HMGB1P26-201ENST00000452520 ANKMY2Q8IV38 441 aa9.23□□□□□ -0.93
HMGB1P26-201ENST00000452520 FAM200AQ8TCP9 573 aa9.23□□□□□ -0.93
HMGB1P26-201ENST00000452520 ZNF594Q96JF6 807 aaPredicted RBP9.23□□□□□ -0.93
HMGB1P26-201ENST00000452520 KLF16Q9BXK1 252 aaPredicted RBP9.23□□□□□ -0.93
HMGB1P26-201ENST00000452520 OSBPL3Q9H4L5 887 aa9.23□□□□□ -0.93
HMGB1P26-201ENST00000452520 KIAA1024Q9UPX6 916 aa9.23□□□□□ -0.93
HMGB1P26-201ENST00000452520 DPYDQ12882 1025 aa9.22□□□□□ -0.93
HMGB1P26-201ENST00000452520 CCDC102BQ68D86 513 aa9.22□□□□□ -0.93
HMGB1P26-201ENST00000452520 SIX5Q8N196 739 aa9.22□□□□□ -0.93
HMGB1P26-201ENST00000452520 TRAIPQ9BWF2 469 aa9.22□□□□□ -0.93
HMGB1P26-201ENST00000452520 STK32AQ8WU08 396 aa9.21□□□□□ -0.94
HMGB1P26-201ENST00000452520 USTQ9Y2C2 406 aa9.21□□□□□ -0.94
HMGB1P26-201ENST00000452520 CARNS1A5YM72 827 aa9.2□□□□□ -0.94
HMGB1P26-201ENST00000452520 TMEM88BA6NKF7 163 aa9.2□□□□□ -0.94
HMGB1P26-201ENST00000452520 PSME1Q06323 249 aa9.2□□□□□ -0.94
HMGB1P26-201ENST00000452520 TMEM164Q5U3C3 297 aa9.2□□□□□ -0.94
HMGB1P26-201ENST00000452520 PDZRN3Q9UPQ7 1066 aa9.2□□□□□ -0.94
HMGB1P26-201ENST00000452520 ZIC2O95409 532 aaPredicted RBP9.19□□□□□ -0.94
HMGB1P26-201ENST00000452520 WDR4P57081 412 aaKnown RBP9.19□□□□□ -0.94
HMGB1P26-201ENST00000452520 TPCN2Q8NHX9 752 aa9.19□□□□□ -0.94
HMGB1P26-201ENST00000452520 HPS1Q92902 700 aa9.19□□□□□ -0.94
HMGB1P26-201ENST00000452520 ITPKCQ96DU7 683 aa9.19□□□□□ -0.94
HMGB1P26-201ENST00000452520 SEC13P55735 322 aa9.18□□□□□ -0.94
HMGB1P26-201ENST00000452520 FAM69CQ0P6D2 419 aa9.18□□□□□ -0.94
HMGB1P26-201ENST00000452520 RBM19Q9Y4C8 960 aaKnown RBP9.18□□□□□ -0.94
HMGB1P26-201ENST00000452520 SFI1A8K8P3 1242 aa9.17□□□□□ -0.94
HMGB1P26-201ENST00000452520 TIMP2P16035 220 aa9.17□□□□□ -0.94
HMGB1P26-201ENST00000452520 CBLBQ13191 982 aa9.17□□□□□ -0.94
HMGB1P26-201ENST00000452520 Q6ZVU0 165 aa9.17□□□□□ -0.94
HMGB1P26-201ENST00000452520 ZFAND3Q9H8U3 227 aa9.17□□□□□ -0.94
HMGB1P26-201ENST00000452520 STAU1O95793 577 aaKnown RBP9.16□□□□□ -0.94
HMGB1P26-201ENST00000452520 GNRH1P01148 92 aa9.16□□□□□ -0.94
HMGB1P26-201ENST00000452520 CYP2U1Q7Z449 544 aa9.16□□□□□ -0.94
HMGB1P26-201ENST00000452520 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.16□□□□□ -0.94
HMGB1P26-201ENST00000452520 TMEM229AB2RXF0 380 aa9.15□□□□□ -0.94
HMGB1P26-201ENST00000452520 SCNN1DP51172 638 aa9.15□□□□□ -0.94
HMGB1P26-201ENST00000452520 KDF1Q8NAX2 398 aaPredicted RBP9.15□□□□□ -0.94
HMGB1P26-201ENST00000452520 INHAP05111 366 aa9.14□□□□□ -0.95
HMGB1P26-201ENST00000452520 ADH1AP07327 375 aa9.14□□□□□ -0.95
HMGB1P26-201ENST00000452520 GDF10P55107 478 aa9.14□□□□□ -0.95
HMGB1P26-201ENST00000452520 ETNK1Q9HBU6 452 aa9.14□□□□□ -0.95
HMGB1P26-201ENST00000452520 M0R2N6 131 aa9.13□□□□□ -0.95
HMGB1P26-201ENST00000452520 WASLO00401 505 aaPredicted RBP9.13□□□□□ -0.95
HMGB1P26-201ENST00000452520 SWI5Q1ZZU3 235 aa9.13□□□□□ -0.95
HMGB1P26-201ENST00000452520 ZNF358Q9NW07 568 aa9.13□□□□□ -0.95
HMGB1P26-201ENST00000452520 BACH1O14867 736 aa9.12□□□□□ -0.95
HMGB1P26-201ENST00000452520 PTGIRP43119 386 aa9.12□□□□□ -0.95
HMGB1P26-201ENST00000452520 ESCO1Q5FWF5 840 aa9.12□□□□□ -0.95
HMGB1P26-201ENST00000452520 CLP1Q92989 425 aaKnown RBP9.12□□□□□ -0.95
HMGB1P26-201ENST00000452520 AGBL1Q96MI9 1066 aa9.12□□□□□ -0.95
HMGB1P26-201ENST00000452520 SLC4A9Q96Q91 983 aa9.12□□□□□ -0.95
HMGB1P26-201ENST00000452520 HINFPQ9BQA5 517 aa9.12□□□□□ -0.95
HMGB1P26-201ENST00000452520 SLAIN2Q9P270 581 aa9.12□□□□□ -0.95
HMGB1P26-201ENST00000452520 A0A1W2PRU2 124 aa9.11□□□□□ -0.95
HMGB1P26-201ENST00000452520 CAPN5O15484 640 aaPredicted RBP9.11□□□□□ -0.95
HMGB1P26-201ENST00000452520 TSEN2Q8NCE0 465 aaKnown RBP9.11□□□□□ -0.95
HMGB1P26-201ENST00000452520 XAGE2Q96GT9 111 aa9.11□□□□□ -0.95
HMGB1P26-201ENST00000452520 ARHGEF10LQ9HCE6 1279 aa9.11□□□□□ -0.95
HMGB1P26-201ENST00000452520 RAB6BQ9NRW1 208 aa9.11□□□□□ -0.95
HMGB1P26-201ENST00000452520 SERTAD1Q9UHV2 236 aa9.11□□□□□ -0.95
HMGB1P26-201ENST00000452520 FAM187AA6NFU0 413 aa9.1□□□□□ -0.95
HMGB1P26-201ENST00000452520 GFRA3O60609 400 aa9.1□□□□□ -0.95
HMGB1P26-201ENST00000452520 BRD1O95696 1058 aa9.1□□□□□ -0.95
HMGB1P26-201ENST00000452520 KCTD17Q8N5Z5 321 aa9.1□□□□□ -0.95
HMGB1P26-201ENST00000452520 PODXL2Q9NZ53 605 aa9.1□□□□□ -0.95
HMGB1P26-201ENST00000452520 AVPP01185 164 aa9.09□□□□□ -0.95
HMGB1P26-201ENST00000452520 IL2RAP01589 272 aa9.09□□□□□ -0.95
HMGB1P26-201ENST00000452520 RELBQ01201 579 aa9.09□□□□□ -0.95
HMGB1P26-201ENST00000452520 CLN3Q13286 438 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms