RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 RTL1A6NKG5 1358 aa16.93■□□□□ 0.3
POLR1B-209ENST00000448770 ESPNB1AK53 854 aa16.93■□□□□ 0.3
POLR1B-209ENST00000448770 EIF4A2Q14240 407 aaKnown RBP16.93■□□□□ 0.3
POLR1B-209ENST00000448770 CLEC17AQ6ZS10 378 aa16.93■□□□□ 0.3
POLR1B-209ENST00000448770 AKAP12Q02952 1782 aa16.93■□□□□ 0.3
POLR1B-209ENST00000448770 KIF24Q5T7B8 1368 aa16.93■□□□□ 0.3
POLR1B-209ENST00000448770 SDSP20132 328 aa16.93■□□□□ 0.3
POLR1B-209ENST00000448770 NAP1L5Q96NT1 182 aaPredicted RBP16.93■□□□□ 0.3
POLR1B-209ENST00000448770 ISY1Q9ULR0 285 aaKnown RBP16.93■□□□□ 0.3
POLR1B-209ENST00000448770 LMOD3Q0VAK6 560 aa16.92■□□□□ 0.3
POLR1B-209ENST00000448770 SULT6B1Q6IMI4 303 aa16.92■□□□□ 0.3
POLR1B-209ENST00000448770 CHAMP1Q96JM3 812 aa16.92■□□□□ 0.3
POLR1B-209ENST00000448770 CYP2E1P05181 493 aaPredicted RBP16.92■□□□□ 0.3
POLR1B-209ENST00000448770 PEAK1Q9H792 1746 aa16.91■□□□□ 0.3
POLR1B-209ENST00000448770 ZGPATQ8N5A5 531 aaKnown RBP16.91■□□□□ 0.3
POLR1B-209ENST00000448770 CHL1O00533 1208 aa16.9■□□□□ 0.3
POLR1B-209ENST00000448770 MLECQ14165 292 aa16.9■□□□□ 0.3
POLR1B-209ENST00000448770 RABEP1Q15276 862 aa16.9■□□□□ 0.3
POLR1B-209ENST00000448770 SKOR2Q2VWA4 1001 aaPredicted RBP16.9■□□□□ 0.3
POLR1B-209ENST00000448770 MIS18AQ9NYP9 233 aa16.9■□□□□ 0.3
POLR1B-209ENST00000448770 CCDC61Q9Y6R9 512 aa16.9■□□□□ 0.3
POLR1B-209ENST00000448770 UBE2Q2Q8WVN8 375 aa16.89■□□□□ 0.29
POLR1B-209ENST00000448770 ITSN1Q15811 1721 aa16.89■□□□□ 0.29
POLR1B-209ENST00000448770 KLHL40Q2TBA0 621 aa16.89■□□□□ 0.29
POLR1B-209ENST00000448770 RIMS1Q86UR5 1692 aaKnown RBP16.89■□□□□ 0.29
POLR1B-209ENST00000448770 MCTP1Q6DN14 999 aa16.88■□□□□ 0.29
POLR1B-209ENST00000448770 G2E3Q7L622 706 aa16.88■□□□□ 0.29
POLR1B-209ENST00000448770 ZDHHC9Q9Y397 364 aa16.88■□□□□ 0.29
POLR1B-209ENST00000448770 DDX49Q9Y6V7 483 aaKnown RBP16.88■□□□□ 0.29
POLR1B-209ENST00000448770 CRB1P82279 1406 aa16.87■□□□□ 0.29
POLR1B-209ENST00000448770 FOXO3O43524 673 aa16.87■□□□□ 0.29
POLR1B-209ENST00000448770 HSP90AB2PQ58FF8 381 aa16.87■□□□□ 0.29
POLR1B-209ENST00000448770 LMBRD1Q9NUN5 540 aa16.87■□□□□ 0.29
POLR1B-209ENST00000448770 RGPD1P0DJD0 1748 aa16.87■□□□□ 0.29
POLR1B-209ENST00000448770 AGLP35573 1532 aa16.87■□□□□ 0.29
POLR1B-209ENST00000448770 F6X3S4 739 aa16.86■□□□□ 0.29
POLR1B-209ENST00000448770 TSHZ3Q63HK5 1081 aa16.86■□□□□ 0.29
POLR1B-209ENST00000448770 RPAP2Q8IXW5 612 aaPredicted RBP16.86■□□□□ 0.29
POLR1B-209ENST00000448770 OVOS2A0A0J9YW53 1432 aa16.86■□□□□ 0.29
POLR1B-209ENST00000448770 OVOS2Q6IE36 1432 aa16.86■□□□□ 0.29
POLR1B-209ENST00000448770 NUTM2FA1L443 756 aa16.86■□□□□ 0.29
POLR1B-209ENST00000448770 ROBO2Q9HCK4 1378 aa16.85■□□□□ 0.29
POLR1B-209ENST00000448770 TECPR2O15040 1411 aa16.85■□□□□ 0.29
POLR1B-209ENST00000448770 NASPP49321 788 aaPredicted RBP16.85■□□□□ 0.29
POLR1B-209ENST00000448770 KIAA0232Q92628 1395 aa16.84■□□□□ 0.29
POLR1B-209ENST00000448770 PPP1R9BQ96SB3 815 aa16.84■□□□□ 0.29
POLR1B-209ENST00000448770 TTC21BQ7Z4L5 1316 aa16.84■□□□□ 0.29
POLR1B-209ENST00000448770 IBTKQ9P2D0 1353 aaPredicted RBP16.84■□□□□ 0.29
POLR1B-209ENST00000448770 SOX12O15370 315 aa16.84■□□□□ 0.29
POLR1B-209ENST00000448770 SLC4A2P04920 1241 aa16.84■□□□□ 0.29
POLR1B-209ENST00000448770 CAVIN1Q6NZI2 390 aaKnown RBP16.84■□□□□ 0.29
POLR1B-209ENST00000448770 RBM27Q9P2N5 1060 aaKnown RBP16.84■□□□□ 0.29
POLR1B-209ENST00000448770 PTMSP20962 102 aa16.83■□□□□ 0.28
POLR1B-209ENST00000448770 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.83■□□□□ 0.28
POLR1B-209ENST00000448770 GPT2Q8TD30 523 aa16.82■□□□□ 0.28
POLR1B-209ENST00000448770 TRIM44Q96DX7 344 aaPredicted RBP16.82■□□□□ 0.28
POLR1B-209ENST00000448770 ZSCAN23Q3MJ62 389 aa16.82■□□□□ 0.28
POLR1B-209ENST00000448770 NSFL1CQ9UNZ2 370 aaKnown RBP16.82■□□□□ 0.28
POLR1B-209ENST00000448770 PTPRCP08575 1304 aa16.81■□□□□ 0.28
POLR1B-209ENST00000448770 ACEP12821 1306 aa16.81■□□□□ 0.28
POLR1B-209ENST00000448770 ZNF445P59923 1031 aa16.81■□□□□ 0.28
POLR1B-209ENST00000448770 MAP3K19Q56UN5 1328 aa16.81■□□□□ 0.28
POLR1B-209ENST00000448770 NALCNQ8IZF0 1738 aa16.81■□□□□ 0.28
POLR1B-209ENST00000448770 TUBGCP6Q96RT7 1819 aa16.81■□□□□ 0.28
POLR1B-209ENST00000448770 GOLGA6L22H0YM25 854 aa16.81■□□□□ 0.28
POLR1B-209ENST00000448770 RBSNQ9H1K0 784 aa16.81■□□□□ 0.28
POLR1B-209ENST00000448770 TOPAZ1Q8N9V7 1692 aa16.81■□□□□ 0.28
POLR1B-209ENST00000448770 PDE1AP54750 535 aa16.8■□□□□ 0.28
POLR1B-209ENST00000448770 NUCB2P80303 420 aa16.8■□□□□ 0.28
POLR1B-209ENST00000448770 SLC4A10Q6U841 1118 aa16.8■□□□□ 0.28
POLR1B-209ENST00000448770 SALL3Q9BXA9 1300 aa16.8■□□□□ 0.28
POLR1B-209ENST00000448770 NCLP19338 710 aaKnown RBP16.8■□□□□ 0.28
POLR1B-209ENST00000448770 CCDC173Q0VFZ6 552 aa16.8■□□□□ 0.28
POLR1B-209ENST00000448770 EXOC6BQ9Y2D4 811 aa16.8■□□□□ 0.28
POLR1B-209ENST00000448770 MTHFSDQ2M296 383 aaKnown RBP16.79■□□□□ 0.28
POLR1B-209ENST00000448770 FOXD4L5Q5VV16 416 aaPredicted RBP16.79■□□□□ 0.28
POLR1B-209ENST00000448770 FOXD4L4Q8WXT5 416 aaPredicted RBP16.79■□□□□ 0.28
POLR1B-209ENST00000448770 PRPF40AO75400 957 aaKnown RBP16.79■□□□□ 0.28
POLR1B-209ENST00000448770 PALD1Q9ULE6 856 aa16.79■□□□□ 0.28
POLR1B-209ENST00000448770 PRIM1P49642 420 aaKnown RBP16.78■□□□□ 0.28
POLR1B-209ENST00000448770 ERC2O15083 957 aa16.78■□□□□ 0.28
POLR1B-209ENST00000448770 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.78■□□□□ 0.28
POLR1B-209ENST00000448770 USP6P35125 1406 aa16.78■□□□□ 0.28
POLR1B-209ENST00000448770 OSBPL3Q9H4L5 887 aa16.77■□□□□ 0.28
POLR1B-209ENST00000448770 CEP170BQ9Y4F5 1589 aaPredicted RBP16.77■□□□□ 0.28
POLR1B-209ENST00000448770 ADAMTS13Q76LX8 1427 aa16.77■□□□□ 0.27
POLR1B-209ENST00000448770 SIRT1Q96EB6 747 aa16.77■□□□□ 0.27
POLR1B-209ENST00000448770 TMEM63CQ9P1W3 806 aa16.77■□□□□ 0.27
POLR1B-209ENST00000448770 PNMA6EA0A0J9YXQ4 647 aa16.76■□□□□ 0.27
POLR1B-209ENST00000448770 ST18O60284 1047 aa16.76■□□□□ 0.27
POLR1B-209ENST00000448770 PPP6R1Q9UPN7 881 aa16.76■□□□□ 0.27
POLR1B-209ENST00000448770 USP31Q70CQ4 1352 aa16.76■□□□□ 0.27
POLR1B-209ENST00000448770 IL25Q9H293 177 aa16.76■□□□□ 0.27
POLR1B-209ENST00000448770 TSPYL4Q9UJ04 414 aa16.76■□□□□ 0.27
POLR1B-209ENST00000448770 REC8O95072 547 aa16.75■□□□□ 0.27
POLR1B-209ENST00000448770 TMX3Q96JJ7 454 aa16.75■□□□□ 0.27
POLR1B-209ENST00000448770 SSH2Q76I76 1423 aa16.75■□□□□ 0.27
POLR1B-209ENST00000448770 UNC5CLQ8IV45 518 aa16.75■□□□□ 0.27
POLR1B-209ENST00000448770 CWC22Q9HCG8 908 aaKnown RBP16.75■□□□□ 0.27
POLR1B-209ENST00000448770 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 221.5 ms