RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 SMC3Q9UQE7 1217 aa10.94□□□□□ -0.66
SMC6-207ENST00000448223 DUOX2Q9NRD8 1548 aa10.94□□□□□ -0.66
SMC6-207ENST00000448223 STK31Q9BXU1 1019 aa10.94□□□□□ -0.66
SMC6-207ENST00000448223 TRIM34Q9BYJ4 488 aa10.94□□□□□ -0.66
SMC6-207ENST00000448223 LMOD2Q6P5Q4 547 aa10.94□□□□□ -0.66
SMC6-207ENST00000448223 TOMM22Q9NS69 142 aa10.94□□□□□ -0.66
SMC6-207ENST00000448223 A0A0G2JS52 829 aa10.94□□□□□ -0.66
SMC6-207ENST00000448223 RRS1Q15050 365 aaKnown RBP10.94□□□□□ -0.66
SMC6-207ENST00000448223 NINLQ9Y2I6 1382 aa10.94□□□□□ -0.66
SMC6-207ENST00000448223 HOMEZQ8IX15 550 aa10.93□□□□□ -0.66
SMC6-207ENST00000448223 TRAPPC8Q9Y2L5 1435 aa10.93□□□□□ -0.66
SMC6-207ENST00000448223 E9PCH4 1651 aa10.93□□□□□ -0.66
SMC6-207ENST00000448223 SMC2O95347 1197 aa10.93□□□□□ -0.66
SMC6-207ENST00000448223 BRD2P25440 801 aaKnown RBP10.93□□□□□ -0.66
SMC6-207ENST00000448223 RILPL2Q969X0 211 aa10.93□□□□□ -0.66
SMC6-207ENST00000448223 RBM28Q9NW13 759 aaKnown RBP10.93□□□□□ -0.66
SMC6-207ENST00000448223 CCDC91Q7Z6B0 441 aa10.93□□□□□ -0.66
SMC6-207ENST00000448223 WDR63Q8IWG1 891 aa10.93□□□□□ -0.66
SMC6-207ENST00000448223 WAPLQ7Z5K2 1190 aa10.92□□□□□ -0.66
SMC6-207ENST00000448223 TBC1D32Q96NH3 1257 aa10.92□□□□□ -0.66
SMC6-207ENST00000448223 TXLNBQ8N3L3 684 aa10.92□□□□□ -0.66
SMC6-207ENST00000448223 MIS18AQ9NYP9 233 aa10.92□□□□□ -0.66
SMC6-207ENST00000448223 GBP2P32456 591 aaPredicted RBP10.92□□□□□ -0.66
SMC6-207ENST00000448223 FAM193AP78312 1265 aa10.92□□□□□ -0.66
SMC6-207ENST00000448223 KIAA1328Q86T90 577 aa10.92□□□□□ -0.66
SMC6-207ENST00000448223 MICALCLQ6ZW33 695 aa10.92□□□□□ -0.66
SMC6-207ENST00000448223 TRMT2AQ8IZ69 625 aaKnown RBP10.92□□□□□ -0.66
SMC6-207ENST00000448223 KIF20AO95235 890 aa10.92□□□□□ -0.66
SMC6-207ENST00000448223 CPSF2Q9P2I0 782 aaKnown RBP10.92□□□□□ -0.66
SMC6-207ENST00000448223 GBP3Q9H0R5 595 aa10.91□□□□□ -0.66
SMC6-207ENST00000448223 FAM83GA6ND36 823 aa10.91□□□□□ -0.66
SMC6-207ENST00000448223 KIF2AO00139 706 aaPredicted RBP10.91□□□□□ -0.66
SMC6-207ENST00000448223 FILIP1Q7Z7B0 1213 aa10.91□□□□□ -0.66
SMC6-207ENST00000448223 MAST1Q9Y2H9 1570 aa10.91□□□□□ -0.66
SMC6-207ENST00000448223 NOS1P29475 1434 aa10.91□□□□□ -0.66
SMC6-207ENST00000448223 ODF2Q5BJF6 829 aa10.91□□□□□ -0.66
SMC6-207ENST00000448223 KRT222Q8N1A0 295 aa10.91□□□□□ -0.66
SMC6-207ENST00000448223 SDF4Q9BRK5 362 aa10.91□□□□□ -0.66
SMC6-207ENST00000448223 SMARCA5O60264 1052 aaPredicted RBP10.91□□□□□ -0.66
SMC6-207ENST00000448223 CHD1LQ86WJ1 897 aa10.91□□□□□ -0.66
SMC6-207ENST00000448223 CCDC192P0DO97 292 aa10.9□□□□□ -0.66
SMC6-207ENST00000448223 XRCC6P12956 609 aaKnown RBP eCLIP10.9□□□□□ -0.66
SMC6-207ENST00000448223 NUTM2GQ5VZR2 741 aa10.9□□□□□ -0.66
SMC6-207ENST00000448223 OLFM4Q6UX06 510 aa10.9□□□□□ -0.66
SMC6-207ENST00000448223 AAMPQ13685 434 aa10.9□□□□□ -0.66
SMC6-207ENST00000448223 RTF1Q92541 710 aaKnown RBP10.9□□□□□ -0.66
SMC6-207ENST00000448223 PRIMPOLQ96LW4 560 aa10.9□□□□□ -0.66
SMC6-207ENST00000448223 CCDC94Q9BW85 323 aaPredicted RBP10.9□□□□□ -0.66
SMC6-207ENST00000448223 MCM5P33992 734 aa10.9□□□□□ -0.67
SMC6-207ENST00000448223 ENOX2Q16206 610 aaKnown RBP10.9□□□□□ -0.67
SMC6-207ENST00000448223 CDK19Q9BWU1 502 aa10.9□□□□□ -0.67
SMC6-207ENST00000448223 EMILIN1Q9Y6C2 1016 aa10.9□□□□□ -0.67
SMC6-207ENST00000448223 CFAP65Q6ZU64 1925 aaKnown RBP10.89□□□□□ -0.67
SMC6-207ENST00000448223 ZKSCAN1P17029 563 aaPredicted RBP10.89□□□□□ -0.67
SMC6-207ENST00000448223 BMS1Q14692 1282 aaKnown RBP10.89□□□□□ -0.67
SMC6-207ENST00000448223 CRACR2AQ9BSW2 395 aa10.89□□□□□ -0.67
SMC6-207ENST00000448223 ERLIN2O94905 339 aa10.89□□□□□ -0.67
SMC6-207ENST00000448223 LMAN1P49257 510 aa10.89□□□□□ -0.67
SMC6-207ENST00000448223 TWISTNBQ3B726 338 aaPredicted RBP10.89□□□□□ -0.67
SMC6-207ENST00000448223 RNF187Q5TA31 235 aaPredicted RBP10.89□□□□□ -0.67
SMC6-207ENST00000448223 RBM33Q96EV2 1170 aaKnown RBP10.89□□□□□ -0.67
SMC6-207ENST00000448223 RABEP1Q15276 862 aa10.89□□□□□ -0.67
SMC6-207ENST00000448223 CCDC47Q96A33 483 aaKnown RBP10.89□□□□□ -0.67
SMC6-207ENST00000448223 SMARCE1Q969G3 411 aa10.89□□□□□ -0.67
SMC6-207ENST00000448223 RASSF4Q9H2L5 321 aa10.89□□□□□ -0.67
SMC6-207ENST00000448223 TTC37Q6PGP7 1564 aa10.88□□□□□ -0.67
SMC6-207ENST00000448223 TTC31Q49AM3 519 aaPredicted RBP10.88□□□□□ -0.67
SMC6-207ENST00000448223 TXNDC2Q86VQ3 553 aa10.88□□□□□ -0.67
SMC6-207ENST00000448223 RRAGDQ9NQL2 400 aaPredicted RBP10.88□□□□□ -0.67
SMC6-207ENST00000448223 USP19O94966 1318 aa10.88□□□□□ -0.67
SMC6-207ENST00000448223 GOLGA6L10A0A0M3HER8 536 aa10.88□□□□□ -0.67
SMC6-207ENST00000448223 FBXO31Q5XUX0 539 aaPredicted RBP10.88□□□□□ -0.67
SMC6-207ENST00000448223 BANK1Q8NDB2 785 aa10.88□□□□□ -0.67
SMC6-207ENST00000448223 SETSIPP0DME0 302 aa10.88□□□□□ -0.67
SMC6-207ENST00000448223 SSFA2P28290 1259 aa10.88□□□□□ -0.67
SMC6-207ENST00000448223 PTPN14Q15678 1187 aa10.88□□□□□ -0.67
SMC6-207ENST00000448223 TSHZ3Q63HK5 1081 aa10.88□□□□□ -0.67
SMC6-207ENST00000448223 ZRANB1Q9UGI0 708 aa10.88□□□□□ -0.67
SMC6-207ENST00000448223 PREX2Q70Z35 1606 aa10.88□□□□□ -0.67
SMC6-207ENST00000448223 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.88□□□□□ -0.679e-7■■■□□ 17.5
SMC6-207ENST00000448223 IVLP07476 585 aa10.88□□□□□ -0.67
SMC6-207ENST00000448223 FAM177A1Q8N128 213 aaPredicted RBP10.88□□□□□ -0.67
SMC6-207ENST00000448223 KIF18AQ8NI77 898 aa10.88□□□□□ -0.67
SMC6-207ENST00000448223 COG3Q96JB2 828 aa10.88□□□□□ -0.67
SMC6-207ENST00000448223 INTS3Q68E01 1043 aaKnown RBP10.87□□□□□ -0.67
SMC6-207ENST00000448223 CYB5RLQ6IPT4 315 aa10.87□□□□□ -0.67
SMC6-207ENST00000448223 TSPYL6Q8N831 410 aa10.87□□□□□ -0.67
SMC6-207ENST00000448223 TNPO1Q92973 898 aaKnown RBP10.87□□□□□ -0.67
SMC6-207ENST00000448223 PLCH2O75038 1416 aa10.87□□□□□ -0.67
SMC6-207ENST00000448223 IDI1Q13907 227 aa10.87□□□□□ -0.67
SMC6-207ENST00000448223 TAX1BP1Q86VP1 789 aa10.87□□□□□ -0.67
SMC6-207ENST00000448223 KRT24Q2M2I5 525 aa10.87□□□□□ -0.67
SMC6-207ENST00000448223 CPLX2Q6PUV4 134 aaKnown RBP10.87□□□□□ -0.67
SMC6-207ENST00000448223 HDAC5Q9UQL6 1122 aa10.87□□□□□ -0.67
SMC6-207ENST00000448223 POLR3AO14802 1390 aaPredicted RBP10.87□□□□□ -0.67
SMC6-207ENST00000448223 CDC42BPBQ9Y5S2 1711 aa10.86□□□□□ -0.67
SMC6-207ENST00000448223 LUZP1Q86V48 1076 aa10.86□□□□□ -0.67
SMC6-207ENST00000448223 C16orf71Q8IYS4 520 aaPredicted RBP10.86□□□□□ -0.67
SMC6-207ENST00000448223 ZFP91Q96JP5 570 aaPredicted RBP10.86□□□□□ -0.67
SMC6-207ENST00000448223 FMNL2Q96PY5 1086 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms