RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 TNPO1Q92973 898 aaKnown RBP13.78□□□□□ -0.2
PTCH2-203ENST00000447098 SURF6O75683 361 aaKnown RBP13.78□□□□□ -0.2
PTCH2-203ENST00000447098 NPHP3Q7Z494 1330 aa13.78□□□□□ -0.2
PTCH2-203ENST00000447098 RBM10P98175 930 aaKnown RBP13.78□□□□□ -0.2
PTCH2-203ENST00000447098 PUS7Q96PZ0 661 aaKnown RBP13.78□□□□□ -0.2
PTCH2-203ENST00000447098 IQGAP3Q86VI3 1631 aa13.77□□□□□ -0.2
PTCH2-203ENST00000447098 CROCC2H7BZ55 1655 aa13.77□□□□□ -0.2
PTCH2-203ENST00000447098 POLR3AO14802 1390 aaPredicted RBP13.77□□□□□ -0.2
PTCH2-203ENST00000447098 PIK3C2GO75747 1445 aa13.77□□□□□ -0.2
PTCH2-203ENST00000447098 CCDC173Q0VFZ6 552 aa13.77□□□□□ -0.21
PTCH2-203ENST00000447098 TAF7Q15545 349 aaPredicted RBP13.77□□□□□ -0.21
PTCH2-203ENST00000447098 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.77□□□□□ -0.21
PTCH2-203ENST00000447098 MTHFSDQ2M296 383 aaKnown RBP13.77□□□□□ -0.21
PTCH2-203ENST00000447098 IFT57Q9NWB7 429 aa13.77□□□□□ -0.21
PTCH2-203ENST00000447098 UBAP1LF5GYI3 381 aa13.76□□□□□ -0.21
PTCH2-203ENST00000447098 TRIM27P14373 513 aa13.76□□□□□ -0.21
PTCH2-203ENST00000447098 MCCP23508 829 aa13.76□□□□□ -0.21
PTCH2-203ENST00000447098 TET3O43151 1660 aa13.76□□□□□ -0.21
PTCH2-203ENST00000447098 CCDC85AQ96PX6 553 aaPredicted RBP13.76□□□□□ -0.21
PTCH2-203ENST00000447098 R3HCC1Q9Y3T6 440 aaKnown RBP13.76□□□□□ -0.21
PTCH2-203ENST00000447098 TSPYL6Q8N831 410 aa13.76□□□□□ -0.21
PTCH2-203ENST00000447098 GPATCH3Q96I76 525 aa13.76□□□□□ -0.21
PTCH2-203ENST00000447098 SLC39A6Q13433 755 aa13.76□□□□□ -0.21
PTCH2-203ENST00000447098 CFAP44Q96MT7 982 aa13.76□□□□□ -0.21
PTCH2-203ENST00000447098 SIL1Q9H173 461 aa13.76□□□□□ -0.21
PTCH2-203ENST00000447098 NGLY1Q96IV0 654 aa13.75□□□□□ -0.21
PTCH2-203ENST00000447098 PRR36Q9H6K5 1346 aa13.75□□□□□ -0.21
PTCH2-203ENST00000447098 PIP4K2AP48426 406 aaPredicted RBP13.75□□□□□ -0.21
PTCH2-203ENST00000447098 C8orf58Q8NAV2 365 aa13.75□□□□□ -0.21
PTCH2-203ENST00000447098 G3BP1Q13283 466 aaKnown RBP eCLIP13.75□□□□□ -0.21
PTCH2-203ENST00000447098 CIZ1Q9ULV3 898 aaPredicted RBP13.75□□□□□ -0.21
PTCH2-203ENST00000447098 KIF1BO60333 1816 aa13.75□□□□□ -0.21
PTCH2-203ENST00000447098 IFIT2P09913 472 aaKnown RBP13.74□□□□□ -0.21
PTCH2-203ENST00000447098 NEUROD6Q96NK8 337 aa13.74□□□□□ -0.21
PTCH2-203ENST00000447098 SRCIN1Q9C0H9 1055 aa13.74□□□□□ -0.21
PTCH2-203ENST00000447098 HOXC9P31274 260 aa13.73□□□□□ -0.21
PTCH2-203ENST00000447098 GNAI3P08754 354 aa13.73□□□□□ -0.21
PTCH2-203ENST00000447098 MCTP1Q6DN14 999 aa13.73□□□□□ -0.21
PTCH2-203ENST00000447098 ZSCAN30Q86W11 494 aa13.73□□□□□ -0.21
PTCH2-203ENST00000447098 PDCL3Q9H2J4 239 aa13.73□□□□□ -0.21
PTCH2-203ENST00000447098 CEP152O94986 1710 aa13.73□□□□□ -0.21
PTCH2-203ENST00000447098 UNC13BO14795 1591 aa13.73□□□□□ -0.21
PTCH2-203ENST00000447098 EXOC6BQ9Y2D4 811 aa13.73□□□□□ -0.21
PTCH2-203ENST00000447098 FLT4P35916 1363 aa13.72□□□□□ -0.21
PTCH2-203ENST00000447098 GNAI2P04899 355 aa13.72□□□□□ -0.21
PTCH2-203ENST00000447098 CT47B1P0C2W7 299 aaPredicted RBP13.72□□□□□ -0.21
PTCH2-203ENST00000447098 RNF17Q9BXT8 1623 aaKnown RBP13.72□□□□□ -0.21
PTCH2-203ENST00000447098 IL1RAPL2Q9NP60 686 aa13.72□□□□□ -0.21
PTCH2-203ENST00000447098 FOXD4L5Q5VV16 416 aaPredicted RBP13.72□□□□□ -0.21
PTCH2-203ENST00000447098 FOXD4L4Q8WXT5 416 aaPredicted RBP13.72□□□□□ -0.21
PTCH2-203ENST00000447098 AMOTQ4VCS5 1084 aa13.71□□□□□ -0.21
PTCH2-203ENST00000447098 CAVIN1Q6NZI2 390 aaKnown RBP13.71□□□□□ -0.21
PTCH2-203ENST00000447098 E9PCH4 1651 aa13.71□□□□□ -0.21
PTCH2-203ENST00000447098 MYOM2P54296 1465 aa13.71□□□□□ -0.22
PTCH2-203ENST00000447098 K7ELQ4 463 aaPredicted RBP13.71□□□□□ -0.22
PTCH2-203ENST00000447098 IL13P35225 146 aa13.71□□□□□ -0.22
PTCH2-203ENST00000447098 JARID2Q92833 1246 aaPredicted RBP13.71□□□□□ -0.22
PTCH2-203ENST00000447098 EDC4Q6P2E9 1401 aaKnown RBP13.71□□□□□ -0.22
PTCH2-203ENST00000447098 A2ML1A8K2U0 1454 aa13.7□□□□□ -0.22
PTCH2-203ENST00000447098 PLEKHG3A1L390 1219 aa13.7□□□□□ -0.22
PTCH2-203ENST00000447098 ANO2Q9NQ90 1003 aa13.7□□□□□ -0.22
PTCH2-203ENST00000447098 SBNO2Q9Y2G9 1366 aa13.7□□□□□ -0.22
PTCH2-203ENST00000447098 TRPM1Q7Z4N2 1603 aa13.69□□□□□ -0.22
PTCH2-203ENST00000447098 SRGAP3O43295 1099 aa13.69□□□□□ -0.22
PTCH2-203ENST00000447098 DIP2CQ9Y2E4 1556 aa13.69□□□□□ -0.22
PTCH2-203ENST00000447098 SSFA2P28290 1259 aa13.69□□□□□ -0.22
PTCH2-203ENST00000447098 DIAPH3Q9NSV4 1193 aa13.69□□□□□ -0.22
PTCH2-203ENST00000447098 PLEKHG1Q9ULL1 1385 aa13.69□□□□□ -0.22
PTCH2-203ENST00000447098 KIDINS220Q9ULH0 1771 aa13.69□□□□□ -0.22
PTCH2-203ENST00000447098 ARHGAP31Q2M1Z3 1444 aa13.69□□□□□ -0.22
PTCH2-203ENST00000447098 TMEM94Q12767 1356 aa13.69□□□□□ -0.22
PTCH2-203ENST00000447098 TMOD3Q9NYL9 352 aa13.69□□□□□ -0.22
PTCH2-203ENST00000447098 SMARCA5O60264 1052 aaPredicted RBP13.68□□□□□ -0.22
PTCH2-203ENST00000447098 MAP4K4O95819 1239 aaPredicted RBP13.68□□□□□ -0.22
PTCH2-203ENST00000447098 CCT4P50991 539 aaKnown RBP13.68□□□□□ -0.22
PTCH2-203ENST00000447098 FLIIQ13045 1269 aa13.68□□□□□ -0.22
PTCH2-203ENST00000447098 CHD1LQ86WJ1 897 aa13.68□□□□□ -0.22
PTCH2-203ENST00000447098 SLAIN2Q9P270 581 aa13.68□□□□□ -0.22
PTCH2-203ENST00000447098 TOMM22Q9NS69 142 aa13.68□□□□□ -0.22
PTCH2-203ENST00000447098 FOXD4L6Q3SYB3 417 aaPredicted RBP13.67□□□□□ -0.22
PTCH2-203ENST00000447098 FOXD4L3Q6VB84 417 aaPredicted RBP13.67□□□□□ -0.22
PTCH2-203ENST00000447098 GAS2L3Q86XJ1 694 aa13.67□□□□□ -0.22
PTCH2-203ENST00000447098 IFNL2Q8IZJ0 200 aa13.67□□□□□ -0.22
PTCH2-203ENST00000447098 SPHKAPQ2M3C7 1700 aa13.67□□□□□ -0.22
PTCH2-203ENST00000447098 ABCA6Q8N139 1617 aa13.67□□□□□ -0.22
PTCH2-203ENST00000447098 NBPF6Q5VWK0 638 aa13.67□□□□□ -0.22
PTCH2-203ENST00000447098 BICDL1Q6ZP65 573 aa13.67□□□□□ -0.22
PTCH2-203ENST00000447098 IP6K1Q92551 441 aa13.67□□□□□ -0.22
PTCH2-203ENST00000447098 NBPF4Q96M43 638 aa13.67□□□□□ -0.22
PTCH2-203ENST00000447098 C8orf37Q96NL8 207 aa13.67□□□□□ -0.22
PTCH2-203ENST00000447098 NPC1L1Q9UHC9 1359 aa13.67□□□□□ -0.22
PTCH2-203ENST00000447098 ERBB4Q15303 1308 aa13.67□□□□□ -0.22
PTCH2-203ENST00000447098 MAP7D2Q96T17 732 aa13.67□□□□□ -0.22
PTCH2-203ENST00000447098 ZBTB3Q9H5J0 574 aa13.67□□□□□ -0.22
PTCH2-203ENST00000447098 TRIM35Q9UPQ4 493 aa13.67□□□□□ -0.22
PTCH2-203ENST00000447098 NUCB2P80303 420 aa13.66□□□□□ -0.22
PTCH2-203ENST00000447098 NFATC2IPQ8NCF5 419 aa13.66□□□□□ -0.22
PTCH2-203ENST00000447098 ACSBG1Q96GR2 724 aa13.66□□□□□ -0.22
PTCH2-203ENST00000447098 LMTK3Q96Q04 1460 aa13.66□□□□□ -0.22
PTCH2-203ENST00000447098 INO80Q9ULG1 1556 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms