RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 USP54Q70EL1 1684 aa20.46■□□□□ 0.87
PIKFYVE-206ENST00000443896 API5Q9BZZ5 524 aaKnown RBP20.45■□□□□ 0.86
PIKFYVE-206ENST00000443896 KIAA0232Q92628 1395 aa20.45■□□□□ 0.86
PIKFYVE-206ENST00000443896 NUCB1Q02818 461 aa20.45■□□□□ 0.86
PIKFYVE-206ENST00000443896 MCM10Q7L590 875 aa20.45■□□□□ 0.86
PIKFYVE-206ENST00000443896 CRB1P82279 1406 aa20.44■□□□□ 0.86
PIKFYVE-206ENST00000443896 MARF1Q9Y4F3 1742 aaKnown RBP20.44■□□□□ 0.86
PIKFYVE-206ENST00000443896 A0A0U1RQG5 324 aaPredicted RBP20.44■□□□□ 0.86
PIKFYVE-206ENST00000443896 HAP1P54257 671 aaPredicted RBP20.44■□□□□ 0.86
PIKFYVE-206ENST00000443896 IGSF1Q8N6C5 1336 aa20.43■□□□□ 0.86
PIKFYVE-206ENST00000443896 UPF2Q9HAU5 1272 aaKnown RBP20.43■□□□□ 0.86
PIKFYVE-206ENST00000443896 KIF24Q5T7B8 1368 aa20.43■□□□□ 0.86
PIKFYVE-206ENST00000443896 AMPHP49418 695 aa20.43■□□□□ 0.86
PIKFYVE-206ENST00000443896 ZNF142P52746 1687 aaPredicted RBP20.43■□□□□ 0.86
PIKFYVE-206ENST00000443896 TBC1D32Q96NH3 1257 aa20.42■□□□□ 0.86
PIKFYVE-206ENST00000443896 CHD2O14647 1828 aaKnown RBP20.42■□□□□ 0.86
PIKFYVE-206ENST00000443896 NLRP6P59044 892 aa20.42■□□□□ 0.86
PIKFYVE-206ENST00000443896 HSP90AA2PQ14568 343 aaPredicted RBP20.42■□□□□ 0.86
PIKFYVE-206ENST00000443896 EYA1Q99502 592 aa20.41■□□□□ 0.86
PIKFYVE-206ENST00000443896 MTHFSDQ2M296 383 aaKnown RBP20.4■□□□□ 0.86
PIKFYVE-206ENST00000443896 ANKLE2Q86XL3 938 aa20.4■□□□□ 0.86
PIKFYVE-206ENST00000443896 GCC1Q96CN9 775 aa20.4■□□□□ 0.86
PIKFYVE-206ENST00000443896 KRT24Q2M2I5 525 aa20.39■□□□□ 0.86
PIKFYVE-206ENST00000443896 CHD1LQ86WJ1 897 aa20.39■□□□□ 0.86
PIKFYVE-206ENST00000443896 C1orf115Q9H7X2 142 aa20.38■□□□□ 0.85
PIKFYVE-206ENST00000443896 RGS12O14924 1447 aa20.38■□□□□ 0.85
PIKFYVE-206ENST00000443896 FOXO3O43524 673 aa20.37■□□□□ 0.85
PIKFYVE-206ENST00000443896 SIRT2Q8IXJ6 389 aa20.37■□□□□ 0.85
PIKFYVE-206ENST00000443896 HOXC9P31274 260 aa20.37■□□□□ 0.85
PIKFYVE-206ENST00000443896 INTS3Q68E01 1043 aaKnown RBP20.37■□□□□ 0.85
PIKFYVE-206ENST00000443896 GAS2L2Q8NHY3 880 aa20.37■□□□□ 0.85
PIKFYVE-206ENST00000443896 LNPKQ9C0E8 428 aa20.37■□□□□ 0.85
PIKFYVE-206ENST00000443896 RTF1Q92541 710 aaKnown RBP20.36■□□□□ 0.85
PIKFYVE-206ENST00000443896 NWD1Q149M9 1564 aa20.36■□□□□ 0.85
PIKFYVE-206ENST00000443896 BECN1Q14457 450 aa20.36■□□□□ 0.85
PIKFYVE-206ENST00000443896 ABTB2Q8N961 1025 aa20.36■□□□□ 0.85
PIKFYVE-206ENST00000443896 PTPRCP08575 1304 aa20.35■□□□□ 0.85
PIKFYVE-206ENST00000443896 ADAMTSL3P82987 1691 aa20.34■□□□□ 0.85
PIKFYVE-206ENST00000443896 NUTM2GQ5VZR2 741 aa20.34■□□□□ 0.85
PIKFYVE-206ENST00000443896 PHF8Q9UPP1 1060 aa20.34■□□□□ 0.85
PIKFYVE-206ENST00000443896 HTATSF1O43719 755 aaKnown RBP20.34■□□□□ 0.85
PIKFYVE-206ENST00000443896 LRRC37A3O60309 1634 aa20.34■□□□□ 0.85
PIKFYVE-206ENST00000443896 RTL1A6NKG5 1358 aa20.32■□□□□ 0.84
PIKFYVE-206ENST00000443896 ANKRD45Q5TZF3 282 aa20.32■□□□□ 0.84
PIKFYVE-206ENST00000443896 TSPYL4Q9UJ04 414 aa20.32■□□□□ 0.84
PIKFYVE-206ENST00000443896 ADGRL3Q9HAR2 1447 aa20.31■□□□□ 0.84
PIKFYVE-206ENST00000443896 MIS18AQ9NYP9 233 aa20.31■□□□□ 0.84
PIKFYVE-206ENST00000443896 HSP90AA1P07900 732 aaKnown RBP20.31■□□□□ 0.84
PIKFYVE-206ENST00000443896 BMP2KLQ5H9B9 411 aa20.3■□□□□ 0.84
PIKFYVE-206ENST00000443896 C22orf23Q9BZE7 217 aa20.3■□□□□ 0.84
PIKFYVE-206ENST00000443896 MFAP1P55081 439 aaKnown RBP20.29■□□□□ 0.84
PIKFYVE-206ENST00000443896 ATP10DQ9P241 1426 aa20.28■□□□□ 0.84
PIKFYVE-206ENST00000443896 SETD1BQ9UPS6 1966 aaKnown RBP20.28■□□□□ 0.84
PIKFYVE-206ENST00000443896 LTN1O94822 1766 aa20.28■□□□□ 0.84
PIKFYVE-206ENST00000443896 GNAT3A8MTJ3 354 aa20.28■□□□□ 0.84
PIKFYVE-206ENST00000443896 SLC4A2P04920 1241 aa20.28■□□□□ 0.84
PIKFYVE-206ENST00000443896 NFAT5O94916 1531 aa20.28■□□□□ 0.84
PIKFYVE-206ENST00000443896 MSH6P52701 1360 aa20.27■□□□□ 0.84
PIKFYVE-206ENST00000443896 DCTPP1Q9H773 170 aa20.27■□□□□ 0.84
PIKFYVE-206ENST00000443896 ANKRD44Q8N8A2 993 aa20.26■□□□□ 0.83
PIKFYVE-206ENST00000443896 RBM33Q96EV2 1170 aaKnown RBP20.26■□□□□ 0.83
PIKFYVE-206ENST00000443896 GZF1Q9H116 711 aaPredicted RBP20.26■□□□□ 0.83
PIKFYVE-206ENST00000443896 TBC1D2Q9BYX2 928 aa20.26■□□□□ 0.83
PIKFYVE-206ENST00000443896 SLKQ9H2G2 1235 aaPredicted RBP20.26■□□□□ 0.83
PIKFYVE-206ENST00000443896 C14orf37Q86TY3 774 aa20.26■□□□□ 0.83
PIKFYVE-206ENST00000443896 MAP3K5Q99683 1374 aa20.26■□□□□ 0.83
PIKFYVE-206ENST00000443896 NPHP4O75161 1426 aaPredicted RBP20.25■□□□□ 0.83
PIKFYVE-206ENST00000443896 RPAP2Q8IXW5 612 aaPredicted RBP20.25■□□□□ 0.83
PIKFYVE-206ENST00000443896 IP6K1Q92551 441 aa20.24■□□□□ 0.83
PIKFYVE-206ENST00000443896 LTV1Q96GA3 475 aaPredicted RBP20.24■□□□□ 0.83
PIKFYVE-206ENST00000443896 ESCO1Q5FWF5 840 aa20.23■□□□□ 0.83
PIKFYVE-206ENST00000443896 CEP85Q6P2H3 762 aa20.23■□□□□ 0.83
PIKFYVE-206ENST00000443896 BABAM1Q9NWV8 329 aa20.23■□□□□ 0.83
PIKFYVE-206ENST00000443896 IL17REQ8NFR9 667 aa20.22■□□□□ 0.83
PIKFYVE-206ENST00000443896 PHRF1Q9P1Y6 1649 aaKnown RBP20.22■□□□□ 0.83
PIKFYVE-206ENST00000443896 PSME1Q06323 249 aa20.22■□□□□ 0.83
PIKFYVE-206ENST00000443896 G2E3Q7L622 706 aa20.22■□□□□ 0.83
PIKFYVE-206ENST00000443896 SOS1Q07889 1333 aaPredicted RBP20.22■□□□□ 0.83
PIKFYVE-206ENST00000443896 MEIS3Q99687 375 aa20.22■□□□□ 0.83
PIKFYVE-206ENST00000443896 ANTXR1Q9H6X2 564 aa20.22■□□□□ 0.83
PIKFYVE-206ENST00000443896 RBM25P49756 843 aaKnown RBP20.21■□□□□ 0.83
PIKFYVE-206ENST00000443896 FAM208AQ9UK61 1670 aaKnown RBP20.21■□□□□ 0.83
PIKFYVE-206ENST00000443896 KCNH5Q8NCM2 988 aa20.21■□□□□ 0.83
PIKFYVE-206ENST00000443896 CCT4P50991 539 aaKnown RBP20.2■□□□□ 0.82
PIKFYVE-206ENST00000443896 PANK2Q9BZ23 570 aa20.2■□□□□ 0.82
PIKFYVE-206ENST00000443896 TAF7Q15545 349 aaPredicted RBP20.19■□□□□ 0.82
PIKFYVE-206ENST00000443896 STK31Q9BXU1 1019 aa20.19■□□□□ 0.82
PIKFYVE-206ENST00000443896 USHBP1Q8N6Y0 703 aa20.19■□□□□ 0.82
PIKFYVE-206ENST00000443896 CCDC30Q5VVM6 783 aa20.19■□□□□ 0.82
PIKFYVE-206ENST00000443896 PLEKHM2Q8IWE5 1019 aa20.19■□□□□ 0.82
PIKFYVE-206ENST00000443896 SPRYD3Q8NCJ5 442 aa20.17■□□□□ 0.82
PIKFYVE-206ENST00000443896 F6X3S4 739 aa20.17■□□□□ 0.82
PIKFYVE-206ENST00000443896 NBPF6Q5VWK0 638 aa20.17■□□□□ 0.82
PIKFYVE-206ENST00000443896 NBPF4Q96M43 638 aa20.17■□□□□ 0.82
PIKFYVE-206ENST00000443896 ARID3AQ99856 593 aa20.17■□□□□ 0.82
PIKFYVE-206ENST00000443896 CEMIPQ8WUJ3 1361 aa20.17■□□□□ 0.82
PIKFYVE-206ENST00000443896 TBC1D9Q6ZT07 1266 aa20.17■□□□□ 0.82
PIKFYVE-206ENST00000443896 SLC4A10Q6U841 1118 aa20.16■□□□□ 0.82
PIKFYVE-206ENST00000443896 GSPT1P15170 499 aaKnown RBP20.15■□□□□ 0.82
PIKFYVE-206ENST00000443896 FLIIQ13045 1269 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms