RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 LTV1Q96GA3 475 aaPredicted RBP17.66■□□□□ 0.42
PTCHD3-201ENST00000438700 ZNF335Q9H4Z2 1342 aaPredicted RBP17.66■□□□□ 0.42
PTCHD3-201ENST00000438700 SLIT3O75094 1523 aa17.66■□□□□ 0.42
PTCHD3-201ENST00000438700 CALD1Q05682 793 aaKnown RBP17.66■□□□□ 0.42
PTCHD3-201ENST00000438700 GSE1Q14687 1217 aa17.66■□□□□ 0.42
PTCHD3-201ENST00000438700 ZBTB7CA1YPR0 619 aa17.65■□□□□ 0.42
PTCHD3-201ENST00000438700 DDX17Q92841 729 aaKnown RBP17.65■□□□□ 0.42
PTCHD3-201ENST00000438700 ALS2Q96Q42 1657 aa17.65■□□□□ 0.42
PTCHD3-201ENST00000438700 DDRGK1Q96HY6 314 aa17.65■□□□□ 0.42
PTCHD3-201ENST00000438700 DCTN1Q14203 1278 aa17.64■□□□□ 0.41
PTCHD3-201ENST00000438700 PHRF1Q9P1Y6 1649 aaKnown RBP17.64■□□□□ 0.41
PTCHD3-201ENST00000438700 GCP02774 474 aa17.64■□□□□ 0.41
PTCHD3-201ENST00000438700 IP6K1Q92551 441 aa17.64■□□□□ 0.41
PTCHD3-201ENST00000438700 NOB1Q9ULX3 412 aaKnown RBP17.64■□□□□ 0.41
PTCHD3-201ENST00000438700 AAMPQ13685 434 aa17.63■□□□□ 0.41
PTCHD3-201ENST00000438700 ITPRIPQ8IWB1 547 aa17.63■□□□□ 0.41
PTCHD3-201ENST00000438700 IFT57Q9NWB7 429 aa17.63■□□□□ 0.41
PTCHD3-201ENST00000438700 USP19O94966 1318 aa17.63■□□□□ 0.41
PTCHD3-201ENST00000438700 GNAI1P63096 354 aa17.62■□□□□ 0.41
PTCHD3-201ENST00000438700 ATF7IPQ6VMQ6 1270 aa17.62■□□□□ 0.41
PTCHD3-201ENST00000438700 ZNF853P0CG23 659 aa17.61■□□□□ 0.41
PTCHD3-201ENST00000438700 MTHFSDQ2M296 383 aaKnown RBP17.61■□□□□ 0.41
PTCHD3-201ENST00000438700 RWDD1Q9H446 243 aaPredicted RBP17.61■□□□□ 0.41
PTCHD3-201ENST00000438700 MBIPQ9NS73 344 aa17.61■□□□□ 0.41
PTCHD3-201ENST00000438700 PDZRN3Q9UPQ7 1066 aa17.61■□□□□ 0.41
PTCHD3-201ENST00000438700 NPHP3Q7Z494 1330 aa17.6■□□□□ 0.41
PTCHD3-201ENST00000438700 MCM10Q7L590 875 aa17.6■□□□□ 0.41
PTCHD3-201ENST00000438700 ARHGEF25Q86VW2 580 aa17.6■□□□□ 0.41
PTCHD3-201ENST00000438700 CFAP44Q96MT7 982 aa17.6■□□□□ 0.41
PTCHD3-201ENST00000438700 MED1Q15648 1581 aaPredicted RBP17.59■□□□□ 0.41
PTCHD3-201ENST00000438700 USHBP1Q8N6Y0 703 aa17.59■□□□□ 0.41
PTCHD3-201ENST00000438700 RGPD2P0DJD1 1756 aa17.59■□□□□ 0.41
PTCHD3-201ENST00000438700 TMEM57Q8N5G2 664 aa17.58■□□□□ 0.41
PTCHD3-201ENST00000438700 DAXXQ9UER7 740 aaPredicted RBP17.58■□□□□ 0.41
PTCHD3-201ENST00000438700 VIRMAQ69YN4 1812 aaKnown RBP17.58■□□□□ 0.41
PTCHD3-201ENST00000438700 FRAT2O75474 233 aaPredicted RBP17.58■□□□□ 0.4
PTCHD3-201ENST00000438700 SEC24BO95487 1268 aa17.58■□□□□ 0.4
PTCHD3-201ENST00000438700 PXDNQ92626 1479 aa17.58■□□□□ 0.4
PTCHD3-201ENST00000438700 DDX19BQ9UMR2 479 aa17.57■□□□□ 0.4
PTCHD3-201ENST00000438700 KIF16BQ96L93 1317 aa17.57■□□□□ 0.4
PTCHD3-201ENST00000438700 ELL2O00472 640 aaPredicted RBP17.57■□□□□ 0.4
PTCHD3-201ENST00000438700 GAS2L2Q8NHY3 880 aa17.57■□□□□ 0.4
PTCHD3-201ENST00000438700 NBPF6Q5VWK0 638 aa17.56■□□□□ 0.4
PTCHD3-201ENST00000438700 BRINP3Q76B58 766 aa17.56■□□□□ 0.4
PTCHD3-201ENST00000438700 NBPF4Q96M43 638 aa17.56■□□□□ 0.4
PTCHD3-201ENST00000438700 TNS3Q68CZ2 1445 aa17.56■□□□□ 0.4
PTCHD3-201ENST00000438700 TSPYL6Q8N831 410 aa17.56■□□□□ 0.4
PTCHD3-201ENST00000438700 RTF1Q92541 710 aaKnown RBP17.55■□□□□ 0.4
PTCHD3-201ENST00000438700 LRRC59Q96AG4 307 aaKnown RBP17.55■□□□□ 0.4
PTCHD3-201ENST00000438700 RGPD5Q99666 1765 aa17.54■□□□□ 0.4
PTCHD3-201ENST00000438700 IPO8O15397 1037 aaKnown RBP17.54■□□□□ 0.4
PTCHD3-201ENST00000438700 ZC3H6P61129 1189 aaKnown RBP17.54■□□□□ 0.4
PTCHD3-201ENST00000438700 CRB1P82279 1406 aa17.54■□□□□ 0.4
PTCHD3-201ENST00000438700 VAMP4O75379 141 aa17.54■□□□□ 0.4
PTCHD3-201ENST00000438700 ALDH1L2Q3SY69 923 aa17.54■□□□□ 0.4
PTCHD3-201ENST00000438700 SLAIN2Q9P270 581 aa17.53■□□□□ 0.4
PTCHD3-201ENST00000438700 C8orf58Q8NAV2 365 aa17.53■□□□□ 0.4
PTCHD3-201ENST00000438700 AXIN2Q9Y2T1 843 aa17.53■□□□□ 0.4
PTCHD3-201ENST00000438700 CHL1O00533 1208 aa17.52■□□□□ 0.4
PTCHD3-201ENST00000438700 TWISTNBQ3B726 338 aaPredicted RBP17.52■□□□□ 0.4
PTCHD3-201ENST00000438700 CABLES1Q8TDN4 633 aa17.52■□□□□ 0.4
PTCHD3-201ENST00000438700 ANKRD24Q8TF21 1146 aa17.52■□□□□ 0.4
PTCHD3-201ENST00000438700 ZNF428Q96B54 188 aa17.52■□□□□ 0.4
PTCHD3-201ENST00000438700 SPATA31A3Q5VYP0 1347 aa17.52■□□□□ 0.4
PTCHD3-201ENST00000438700 ZBTB40Q9NUA8 1239 aa17.51■□□□□ 0.39
PTCHD3-201ENST00000438700 CRYBG1Q9Y4K1 1723 aa17.51■□□□□ 0.39
PTCHD3-201ENST00000438700 LRRC37A3O60309 1634 aa17.51■□□□□ 0.39
PTCHD3-201ENST00000438700 MAP3K5Q99683 1374 aa17.5■□□□□ 0.39
PTCHD3-201ENST00000438700 GNAT3A8MTJ3 354 aa17.5■□□□□ 0.39
PTCHD3-201ENST00000438700 HDAC1Q13547 482 aaPredicted RBP17.5■□□□□ 0.39
PTCHD3-201ENST00000438700 HTATSF1O43719 755 aaKnown RBP17.49■□□□□ 0.39
PTCHD3-201ENST00000438700 CAMTA1Q9Y6Y1 1673 aa17.49■□□□□ 0.39
PTCHD3-201ENST00000438700 EIF5BO60841 1220 aaKnown RBP17.49■□□□□ 0.39
PTCHD3-201ENST00000438700 KRT24Q2M2I5 525 aa17.49■□□□□ 0.39
PTCHD3-201ENST00000438700 MIS18AQ9NYP9 233 aa17.49■□□□□ 0.39
PTCHD3-201ENST00000438700 NCAPD2Q15021 1401 aa17.48■□□□□ 0.39
PTCHD3-201ENST00000438700 ERBB3P21860 1342 aa17.47■□□□□ 0.39
PTCHD3-201ENST00000438700 COL18A1P39060 1754 aa17.47■□□□□ 0.39
PTCHD3-201ENST00000438700 MRPL50Q8N5N7 158 aaKnown RBP17.47■□□□□ 0.39
PTCHD3-201ENST00000438700 BRPF1P55201 1214 aaPredicted RBP17.47■□□□□ 0.39
PTCHD3-201ENST00000438700 TSPYL4Q9UJ04 414 aa17.47■□□□□ 0.39
PTCHD3-201ENST00000438700 SOS2Q07890 1332 aaPredicted RBP17.46■□□□□ 0.39
PTCHD3-201ENST00000438700 IL17REQ8NFR9 667 aa17.46■□□□□ 0.38
PTCHD3-201ENST00000438700 C1orf115Q9H7X2 142 aa17.46■□□□□ 0.38
PTCHD3-201ENST00000438700 KIAA0232Q92628 1395 aa17.46■□□□□ 0.38
PTCHD3-201ENST00000438700 CHRNA2Q15822 529 aa17.45■□□□□ 0.38
PTCHD3-201ENST00000438700 SMC5Q8IY18 1101 aa17.45■□□□□ 0.38
PTCHD3-201ENST00000438700 LMO7Q8WWI1 1683 aa17.44■□□□□ 0.38
PTCHD3-201ENST00000438700 UPF2Q9HAU5 1272 aaKnown RBP17.44■□□□□ 0.38
PTCHD3-201ENST00000438700 NHSL1Q5SYE7 1610 aa17.42■□□□□ 0.38
PTCHD3-201ENST00000438700 ZBTB7BO15156 539 aaPredicted RBP17.42■□□□□ 0.38
PTCHD3-201ENST00000438700 PLEKHO1Q53GL0 409 aaPredicted RBP17.42■□□□□ 0.38
PTCHD3-201ENST00000438700 ZNF530Q6P9A1 599 aaPredicted RBP17.42■□□□□ 0.38
PTCHD3-201ENST00000438700 LNPKQ9C0E8 428 aa17.42■□□□□ 0.38
PTCHD3-201ENST00000438700 ABCC6O95255 1503 aa17.42■□□□□ 0.38
PTCHD3-201ENST00000438700 NLRP2Q9NX02 1062 aa17.42■□□□□ 0.38
PTCHD3-201ENST00000438700 CPDO75976 1380 aa17.41■□□□□ 0.38
PTCHD3-201ENST00000438700 HAP1P54257 671 aaPredicted RBP17.41■□□□□ 0.38
PTCHD3-201ENST00000438700 ARHGAP45Q92619 1136 aa17.41■□□□□ 0.38
PTCHD3-201ENST00000438700 AMOTQ4VCS5 1084 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms