RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 SSFA2P28290 1259 aa20.65■□□□□ 0.9
TTC3-209ENST00000438055 LTKP29376 864 aa20.65■□□□□ 0.9
TTC3-209ENST00000438055 CEP85Q6P2H3 762 aa20.65■□□□□ 0.9
TTC3-209ENST00000438055 EXOC6BQ9Y2D4 811 aa20.65■□□□□ 0.9
TTC3-209ENST00000438055 AMOTL2Q9Y2J4 779 aa20.65■□□□□ 0.9
TTC3-209ENST00000438055 MTHFSDQ2M296 383 aaKnown RBP20.65■□□□□ 0.9
TTC3-209ENST00000438055 G2E3Q7L622 706 aa20.65■□□□□ 0.9
TTC3-209ENST00000438055 GAS2L2Q8NHY3 880 aa20.65■□□□□ 0.9
TTC3-209ENST00000438055 MAP2P11137 1827 aaKnown RBP20.65■□□□□ 0.9
TTC3-209ENST00000438055 FOXD4L5Q5VV16 416 aaPredicted RBP20.64■□□□□ 0.9
TTC3-209ENST00000438055 NOL8Q76FK4 1167 aaKnown RBP20.64■□□□□ 0.9
TTC3-209ENST00000438055 FAM43AQ8N2R8 423 aa20.64■□□□□ 0.9
TTC3-209ENST00000438055 FOXD4L4Q8WXT5 416 aaPredicted RBP20.64■□□□□ 0.9
TTC3-209ENST00000438055 TSHZ3Q63HK5 1081 aa20.64■□□□□ 0.89
TTC3-209ENST00000438055 MSH6P52701 1360 aa20.64■□□□□ 0.89
TTC3-209ENST00000438055 TRIM6-TRIM34B2RNG4 842 aa20.63■□□□□ 0.89
TTC3-209ENST00000438055 MAP3K19Q56UN5 1328 aa20.63■□□□□ 0.89
TTC3-209ENST00000438055 CLTCQ00610 1675 aaKnown RBP20.63■□□□□ 0.89
TTC3-209ENST00000438055 SDSP20132 328 aa20.63■□□□□ 0.89
TTC3-209ENST00000438055 TRIM44Q96DX7 344 aaPredicted RBP20.63■□□□□ 0.89
TTC3-209ENST00000438055 CIZ1Q9ULV3 898 aaPredicted RBP20.63■□□□□ 0.89
TTC3-209ENST00000438055 DDX49Q9Y6V7 483 aaKnown RBP20.63■□□□□ 0.89
TTC3-209ENST00000438055 RILPL2Q969X0 211 aa20.62■□□□□ 0.89
TTC3-209ENST00000438055 RABEP1Q15276 862 aa20.61■□□□□ 0.89
TTC3-209ENST00000438055 MRE11P49959 708 aa20.61■□□□□ 0.89
TTC3-209ENST00000438055 KIF2CQ99661 725 aa20.61■□□□□ 0.89
TTC3-209ENST00000438055 ST18O60284 1047 aa20.6■□□□□ 0.89
TTC3-209ENST00000438055 TMEM2Q9UHN6 1383 aa20.6■□□□□ 0.89
TTC3-209ENST00000438055 KIF20BQ96Q89 1820 aa20.6■□□□□ 0.89
TTC3-209ENST00000438055 GRPEL1Q9HAV7 217 aa20.6■□□□□ 0.89
TTC3-209ENST00000438055 PIK3R4Q99570 1358 aa20.6■□□□□ 0.89
TTC3-209ENST00000438055 PTPRCP08575 1304 aa20.59■□□□□ 0.89
TTC3-209ENST00000438055 DLC1Q96QB1 1528 aa20.59■□□□□ 0.89
TTC3-209ENST00000438055 REC8O95072 547 aa20.59■□□□□ 0.89
TTC3-209ENST00000438055 MCTP1Q6DN14 999 aa20.59■□□□□ 0.89
TTC3-209ENST00000438055 EIF2S2P20042 333 aaKnown RBP20.58■□□□□ 0.89
TTC3-209ENST00000438055 RAB3GAP1Q15042 981 aa20.58■□□□□ 0.89
TTC3-209ENST00000438055 ANP32BQ92688 251 aaKnown RBP20.58■□□□□ 0.89
TTC3-209ENST00000438055 GNAI2P04899 355 aa20.58■□□□□ 0.88
TTC3-209ENST00000438055 EYA1Q99502 592 aa20.58■□□□□ 0.88
TTC3-209ENST00000438055 USHBP1Q8N6Y0 703 aa20.57■□□□□ 0.88
TTC3-209ENST00000438055 ABTB2Q8N961 1025 aa20.57■□□□□ 0.88
TTC3-209ENST00000438055 CCT4P50991 539 aaKnown RBP20.57■□□□□ 0.88
TTC3-209ENST00000438055 SKOR2Q2VWA4 1001 aaPredicted RBP20.57■□□□□ 0.88
TTC3-209ENST00000438055 SIRT1Q96EB6 747 aa20.57■□□□□ 0.88
TTC3-209ENST00000438055 ANKRD26Q9UPS8 1709 aa20.57■□□□□ 0.88
TTC3-209ENST00000438055 PLEKHG3A1L390 1219 aa20.56■□□□□ 0.88
TTC3-209ENST00000438055 LMOD2Q6P5Q4 547 aa20.56■□□□□ 0.88
TTC3-209ENST00000438055 RBM33Q96EV2 1170 aaKnown RBP20.56■□□□□ 0.88
TTC3-209ENST00000438055 NAP1L5Q96NT1 182 aaPredicted RBP20.55■□□□□ 0.88
TTC3-209ENST00000438055 RTL1A6NKG5 1358 aa20.55■□□□□ 0.88
TTC3-209ENST00000438055 TPRNQ4KMQ1 711 aa20.55■□□□□ 0.88
TTC3-209ENST00000438055 USP26Q9BXU7 913 aa20.55■□□□□ 0.88
TTC3-209ENST00000438055 ANO2Q9NQ90 1003 aa20.55■□□□□ 0.88
TTC3-209ENST00000438055 RRAGDQ9NQL2 400 aaPredicted RBP20.55■□□□□ 0.88
TTC3-209ENST00000438055 CCDC30Q5VVM6 783 aa20.54■□□□□ 0.88
TTC3-209ENST00000438055 FLIIQ13045 1269 aa20.54■□□□□ 0.88
TTC3-209ENST00000438055 ERC2O15083 957 aa20.54■□□□□ 0.88
TTC3-209ENST00000438055 NEK4P51957 841 aa20.53■□□□□ 0.88
TTC3-209ENST00000438055 PTMSP20962 102 aa20.52■□□□□ 0.88
TTC3-209ENST00000438055 FOXD4L6Q3SYB3 417 aaPredicted RBP20.52■□□□□ 0.88
TTC3-209ENST00000438055 FOXD4L3Q6VB84 417 aaPredicted RBP20.52■□□□□ 0.88
TTC3-209ENST00000438055 IL1RAPL2Q9NP60 686 aa20.52■□□□□ 0.88
TTC3-209ENST00000438055 GNAT3A8MTJ3 354 aa20.52■□□□□ 0.88
TTC3-209ENST00000438055 CDC42BPGQ6DT37 1551 aa20.52■□□□□ 0.88
TTC3-209ENST00000438055 FSD2A1L4K1 749 aa20.52■□□□□ 0.87
TTC3-209ENST00000438055 LRRCC1Q9C099 1032 aa20.52■□□□□ 0.87
TTC3-209ENST00000438055 PDE1AP54750 535 aa20.51■□□□□ 0.87
TTC3-209ENST00000438055 SPATA31D1Q6ZQQ2 1576 aa20.51■□□□□ 0.87
TTC3-209ENST00000438055 BAG4O95429 457 aaKnown RBP20.51■□□□□ 0.87
TTC3-209ENST00000438055 GNAI3P08754 354 aa20.51■□□□□ 0.87
TTC3-209ENST00000438055 USP6P35125 1406 aa20.51■□□□□ 0.87
TTC3-209ENST00000438055 NUCB2P80303 420 aa20.51■□□□□ 0.87
TTC3-209ENST00000438055 FLT4P35916 1363 aa20.5■□□□□ 0.87
TTC3-209ENST00000438055 KIAA0232Q92628 1395 aa20.5■□□□□ 0.87
TTC3-209ENST00000438055 MCCP23508 829 aa20.5■□□□□ 0.87
TTC3-209ENST00000438055 HDGFL1Q5TGJ6 251 aa20.5■□□□□ 0.87
TTC3-209ENST00000438055 LRRFIP2Q9Y608 721 aaKnown RBP20.5■□□□□ 0.87
TTC3-209ENST00000438055 UBTFL1P0CB47 393 aaPredicted RBP20.5■□□□□ 0.87
TTC3-209ENST00000438055 OS9Q13438 667 aaPredicted RBP20.5■□□□□ 0.87
TTC3-209ENST00000438055 CAVIN1Q6NZI2 390 aaKnown RBP20.5■□□□□ 0.87
TTC3-209ENST00000438055 ZGPATQ8N5A5 531 aaKnown RBP20.5■□□□□ 0.87
TTC3-209ENST00000438055 AGLP35573 1532 aa20.49■□□□□ 0.87
TTC3-209ENST00000438055 KIF24Q5T7B8 1368 aa20.49■□□□□ 0.87
TTC3-209ENST00000438055 MAP4K4O95819 1239 aaPredicted RBP20.48■□□□□ 0.87
TTC3-209ENST00000438055 PKP1Q13835 747 aa20.48■□□□□ 0.87
TTC3-209ENST00000438055 GAS2L3Q86XJ1 694 aa20.48■□□□□ 0.87
TTC3-209ENST00000438055 TTC21AQ8NDW8 1320 aa20.48■□□□□ 0.87
TTC3-209ENST00000438055 PRPF40AO75400 957 aaKnown RBP20.47■□□□□ 0.87
TTC3-209ENST00000438055 PNMA6EA0A0J9YXQ4 647 aa20.47■□□□□ 0.87
TTC3-209ENST00000438055 MX1P20591 662 aa20.47■□□□□ 0.87
TTC3-209ENST00000438055 DDIT3P35638 169 aa20.47■□□□□ 0.87
TTC3-209ENST00000438055 DIP2BQ9P265 1576 aa20.47■□□□□ 0.87
TTC3-209ENST00000438055 SURF6O75683 361 aaKnown RBP20.46■□□□□ 0.87
TTC3-209ENST00000438055 NUTM1Q86Y26 1132 aa20.46■□□□□ 0.87
TTC3-209ENST00000438055 ATP10DQ9P241 1426 aa20.46■□□□□ 0.87
TTC3-209ENST00000438055 THEMISQ8N1K5 641 aaPredicted RBP20.45■□□□□ 0.86
TTC3-209ENST00000438055 SBNO1A3KN83 1393 aa20.45■□□□□ 0.86
TTC3-209ENST00000438055 TAF7Q15545 349 aaPredicted RBP20.45■□□□□ 0.86
TTC3-209ENST00000438055 UPF3BQ9BZI7 483 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms