RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 WASHC4Q2M389 1173 aa15.17■□□□□ 0.02
LRRTM1-206ENST00000433224 CADPS2Q86UW7 1296 aa15.17■□□□□ 0.02
LRRTM1-206ENST00000433224 ABCC11Q96J66 1382 aa15.17■□□□□ 0.02
LRRTM1-206ENST00000433224 BICDL1Q6ZP65 573 aa15.16■□□□□ 0.02
LRRTM1-206ENST00000433224 ZBTB3Q9H5J0 574 aa15.16■□□□□ 0.02
LRRTM1-206ENST00000433224 ALDH1L2Q3SY69 923 aa15.16■□□□□ 0.02
LRRTM1-206ENST00000433224 PRDM15P57071 1507 aaPredicted RBP15.16■□□□□ 0.02
LRRTM1-206ENST00000433224 NEO1Q92859 1461 aa15.16■□□□□ 0.02
LRRTM1-206ENST00000433224 C8orf34Q49A92 452 aa15.16■□□□□ 0.02
LRRTM1-206ENST00000433224 STK11IPQ8N1F8 1099 aa15.16■□□□□ 0.02
LRRTM1-206ENST00000433224 MYD88Q99836 296 aa15.16■□□□□ 0.02
LRRTM1-206ENST00000433224 TRIM35Q9UPQ4 493 aa15.16■□□□□ 0.02
LRRTM1-206ENST00000433224 ADGBQ8N7X0 1667 aa15.16■□□□□ 0.02
LRRTM1-206ENST00000433224 VAMP4O75379 141 aa15.15■□□□□ 0.02
LRRTM1-206ENST00000433224 ZKSCAN1P17029 563 aaPredicted RBP15.15■□□□□ 0.02
LRRTM1-206ENST00000433224 HSP90AB4PQ58FF6 505 aa15.15■□□□□ 0.02
LRRTM1-206ENST00000433224 PREX2Q70Z35 1606 aa15.15■□□□□ 0.02
LRRTM1-206ENST00000433224 MCTP1Q6DN14 999 aa15.15■□□□□ 0.02
LRRTM1-206ENST00000433224 NINLQ9Y2I6 1382 aa15.15■□□□□ 0.02
LRRTM1-206ENST00000433224 AACSQ86V21 672 aa15.15■□□□□ 0.02
LRRTM1-206ENST00000433224 TMEM2Q9UHN6 1383 aa15.15■□□□□ 0.02
LRRTM1-206ENST00000433224 SKOR2Q2VWA4 1001 aaPredicted RBP15.14■□□□□ 0.01
LRRTM1-206ENST00000433224 RUFY2Q8WXA3 655 aa15.14■□□□□ 0.01
LRRTM1-206ENST00000433224 TBC1D2Q9BYX2 928 aa15.14■□□□□ 0.01
LRRTM1-206ENST00000433224 EIF2AK4Q9P2K8 1649 aaKnown RBP15.14■□□□□ 0.01
LRRTM1-206ENST00000433224 VPS37CA5D8V6 355 aaPredicted RBP15.14■□□□□ 0.01
LRRTM1-206ENST00000433224 ERC2O15083 957 aa15.14■□□□□ 0.01
LRRTM1-206ENST00000433224 VPS37DQ86XT2 251 aa15.14■□□□□ 0.01
LRRTM1-206ENST00000433224 C16orf71Q8IYS4 520 aaPredicted RBP15.14■□□□□ 0.01
LRRTM1-206ENST00000433224 FAM13BQ9NYF5 915 aa15.14■□□□□ 0.01
LRRTM1-206ENST00000433224 CHPF2Q9P2E5 772 aa15.14■□□□□ 0.01
LRRTM1-206ENST00000433224 G3V3G9 751 aa15.14■□□□□ 0.01
LRRTM1-206ENST00000433224 IL13P35225 146 aa15.14■□□□□ 0.01
LRRTM1-206ENST00000433224 DCAF8Q5TAQ9 597 aa15.14■□□□□ 0.01
LRRTM1-206ENST00000433224 CWC27Q6UX04 472 aaKnown RBP15.14■□□□□ 0.01
LRRTM1-206ENST00000433224 PIK3C2GO75747 1445 aa15.13■□□□□ 0.01
LRRTM1-206ENST00000433224 G2E3Q7L622 706 aa15.13■□□□□ 0.01
LRRTM1-206ENST00000433224 LRRIQ1Q96JM4 1722 aa15.13■□□□□ 0.01
LRRTM1-206ENST00000433224 C19orf44Q9H6X5 657 aa15.13■□□□□ 0.01
LRRTM1-206ENST00000433224 GPTP24298 496 aa15.13■□□□□ 0.01
LRRTM1-206ENST00000433224 RPAP2Q8IXW5 612 aaPredicted RBP15.13■□□□□ 0.01
LRRTM1-206ENST00000433224 CCDC8Q9H0W5 538 aaPredicted RBP15.13■□□□□ 0.01
LRRTM1-206ENST00000433224 HOXC9P31274 260 aa15.12■□□□□ 0.01
LRRTM1-206ENST00000433224 KIAA2012Q0VF49 1180 aa15.12■□□□□ 0.01
LRRTM1-206ENST00000433224 UPF3BQ9BZI7 483 aaKnown RBP15.12■□□□□ 0.01
LRRTM1-206ENST00000433224 DNAAF4Q8WXU2 420 aa15.12■□□□□ 0.01
LRRTM1-206ENST00000433224 NFATC2IPQ8NCF5 419 aa15.12■□□□□ 0.01
LRRTM1-206ENST00000433224 LARP6Q9BRS8 491 aaKnown RBP15.12■□□□□ 0.01
LRRTM1-206ENST00000433224 AMOTQ4VCS5 1084 aa15.11■□□□□ 0.01
LRRTM1-206ENST00000433224 FBXW7Q969H0 707 aa15.11■□□□□ 0.01
LRRTM1-206ENST00000433224 LGR6Q9HBX8 967 aa15.11■□□□□ 0.01
LRRTM1-206ENST00000433224 MAP3K2Q9Y2U5 619 aa15.11■□□□□ 0.01
LRRTM1-206ENST00000433224 SEC24BO95487 1268 aa15.11■□□□□ 0.01
LRRTM1-206ENST00000433224 NASPP49321 788 aaPredicted RBP15.11■□□□□ 0.01
LRRTM1-206ENST00000433224 KIF6Q6ZMV9 814 aa15.11■□□□□ 0.01
LRRTM1-206ENST00000433224 TTC21AQ8NDW8 1320 aa15.11■□□□□ 0.01
LRRTM1-206ENST00000433224 CNTROBQ8N137 903 aa15.11■□□□□ 0.01
LRRTM1-206ENST00000433224 RNF214Q8ND24 703 aa15.11■□□□□ 0.01
LRRTM1-206ENST00000433224 DRC7Q8IY82 874 aa15.1■□□□□ 0.01
LRRTM1-206ENST00000433224 CHMP4CQ96CF2 233 aa15.1■□□□□ 0.01
LRRTM1-206ENST00000433224 PHAXQ9H814 394 aaKnown RBP15.1■□□□□ 0.01
LRRTM1-206ENST00000433224 FKBP4Q02790 459 aaKnown RBP eCLIP15.1■□□□□ 0.01
LRRTM1-206ENST00000433224 MRPL50Q8N5N7 158 aaKnown RBP15.1■□□□□ 0.01
LRRTM1-206ENST00000433224 CNNM1Q9NRU3 951 aa15.1■□□□□ 0.01
LRRTM1-206ENST00000433224 ZFYVE16Q7Z3T8 1539 aa15.1■□□□□ 0.01
LRRTM1-206ENST00000433224 FAM184AQ8NB25 1140 aa15.1■□□□□ 0.01
LRRTM1-206ENST00000433224 BOLA2Q9H3K6 86 aa15.1■□□□□ 0.01
LRRTM1-206ENST00000433224 GRPEL1Q9HAV7 217 aa15.1■□□□□ 0.01
LRRTM1-206ENST00000433224 TMOD3Q9NYL9 352 aa15.1■□□□□ 0.01
LRRTM1-206ENST00000433224 MTMR7Q9Y216 660 aa15.1■□□□□ 0.01
LRRTM1-206ENST00000433224 CCDC27Q2M243 656 aa15.09■□□□□ 0.01
LRRTM1-206ENST00000433224 CAVIN1Q6NZI2 390 aaKnown RBP15.09■□□□□ 0.01
LRRTM1-206ENST00000433224 PUS7Q96PZ0 661 aaKnown RBP15.09■□□□□ 0.01
LRRTM1-206ENST00000433224 ERVK-7P63135 1459 aa15.09■□□□□ 0.01
LRRTM1-206ENST00000433224 H3BQV1 296 aa15.09■□□□□ 0.01
LRRTM1-206ENST00000433224 IFFO2Q5TF58 517 aa15.09■□□□□ 0.01
LRRTM1-206ENST00000433224 DBF4Q9UBU7 674 aaPredicted RBP15.09■□□□□ 0.01
LRRTM1-206ENST00000433224 MLH3Q9UHC1 1453 aa15.09■□□□□ 0.01
LRRTM1-206ENST00000433224 UBE3BQ7Z3V4 1068 aa15.08■□□□□ 0.01
LRRTM1-206ENST00000433224 NGLY1Q96IV0 654 aa15.08■□□□□ 0.01
LRRTM1-206ENST00000433224 FLT4P35916 1363 aa15.08■□□□□ 0.01
LRRTM1-206ENST00000433224 CHAF1AQ13111 956 aaPredicted RBP15.08■□□□□ 0
LRRTM1-206ENST00000433224 ACSBG1Q96GR2 724 aa15.08■□□□□ 0
LRRTM1-206ENST00000433224 PRR36Q9H6K5 1346 aa15.08■□□□□ 0
LRRTM1-206ENST00000433224 A0A087WZG4 1122 aa15.08■□□□□ 0
LRRTM1-206ENST00000433224 RAD21O60216 631 aa15.08■□□□□ 0
LRRTM1-206ENST00000433224 NBPF6Q5VWK0 638 aa15.08■□□□□ 0
LRRTM1-206ENST00000433224 PPP1R42Q7Z4L9 355 aa15.08■□□□□ 0
LRRTM1-206ENST00000433224 NBPF4Q96M43 638 aa15.08■□□□□ 0
LRRTM1-206ENST00000433224 IFNL2Q8IZJ0 200 aa15.08■□□□□ 0
LRRTM1-206ENST00000433224 STK3Q13188 491 aa15.07■□□□□ 0
LRRTM1-206ENST00000433224 SYAP1Q96A49 352 aaPredicted RBP15.07■□□□□ 0
LRRTM1-206ENST00000433224 KLHL34Q8N239 644 aa15.07■□□□□ 0
LRRTM1-206ENST00000433224 ROBO2Q9HCK4 1378 aa15.07■□□□□ 0
LRRTM1-206ENST00000433224 MPNDQ8N594 471 aa15.07■□□□□ 0
LRRTM1-206ENST00000433224 PANK2Q9BZ23 570 aa15.07■□□□□ 0
LRRTM1-206ENST00000433224 TMX4Q9H1E5 349 aaPredicted RBP15.07■□□□□ 0
LRRTM1-206ENST00000433224 R3HCC1Q9Y3T6 440 aaKnown RBP15.07■□□□□ 0
LRRTM1-206ENST00000433224 CCDC57Q2TAC2 916 aa15.06■□□□□ 0
LRRTM1-206ENST00000433224 CWF19L2Q2TBE0 894 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms