RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 ZNF330Q9Y3S2 320 aaPredicted RBP14.08□□□□□ -0.16
CLDN4-202ENST00000431918 GOLGA6L22H0YM25 854 aa14.08□□□□□ -0.16
CLDN4-202ENST00000431918 C16orf71Q8IYS4 520 aaPredicted RBP14.08□□□□□ -0.16
CLDN4-202ENST00000431918 ANXA1P04083 346 aa14.07□□□□□ -0.16
CLDN4-202ENST00000431918 UBTFL1P0CB47 393 aaPredicted RBP14.07□□□□□ -0.16
CLDN4-202ENST00000431918 MPRIPQ6WCQ1 1025 aa14.07□□□□□ -0.16
CLDN4-202ENST00000431918 G2E3Q7L622 706 aa14.07□□□□□ -0.16
CLDN4-202ENST00000431918 SIRT1Q96EB6 747 aa14.07□□□□□ -0.16
CLDN4-202ENST00000431918 GNAI2P04899 355 aa14.07□□□□□ -0.16
CLDN4-202ENST00000431918 ATF3P18847 181 aa14.07□□□□□ -0.16
CLDN4-202ENST00000431918 NCBP3Q53F19 620 aaKnown RBP14.07□□□□□ -0.16
CLDN4-202ENST00000431918 FOXD4L5Q5VV16 416 aaPredicted RBP14.07□□□□□ -0.16
CLDN4-202ENST00000431918 FOXD4L4Q8WXT5 416 aaPredicted RBP14.07□□□□□ -0.16
CLDN4-202ENST00000431918 FLT4P35916 1363 aa14.07□□□□□ -0.16
CLDN4-202ENST00000431918 LRRC59Q96AG4 307 aaKnown RBP14.07□□□□□ -0.16
CLDN4-202ENST00000431918 FAM135BQ49AJ0 1406 aa14.06□□□□□ -0.16
CLDN4-202ENST00000431918 NAP1L5Q96NT1 182 aaPredicted RBP14.06□□□□□ -0.16
CLDN4-202ENST00000431918 C9orf78Q9NZ63 289 aaPredicted RBP14.06□□□□□ -0.16
CLDN4-202ENST00000431918 CCT4P50991 539 aaKnown RBP14.05□□□□□ -0.16
CLDN4-202ENST00000431918 TSHZ3Q63HK5 1081 aa14.05□□□□□ -0.16
CLDN4-202ENST00000431918 CHMP5Q9NZZ3 219 aa14.05□□□□□ -0.16
CLDN4-202ENST00000431918 TAF7Q15545 349 aaPredicted RBP14.05□□□□□ -0.16
CLDN4-202ENST00000431918 IFT172Q9UG01 1749 aa14.05□□□□□ -0.16
CLDN4-202ENST00000431918 SURF6O75683 361 aaKnown RBP14.05□□□□□ -0.16
CLDN4-202ENST00000431918 FLIIQ13045 1269 aa14.05□□□□□ -0.16
CLDN4-202ENST00000431918 PLEKHO1Q53GL0 409 aaPredicted RBP14.05□□□□□ -0.16
CLDN4-202ENST00000431918 RPAP2Q8IXW5 612 aaPredicted RBP14.05□□□□□ -0.16
CLDN4-202ENST00000431918 RAPGEF4Q8WZA2 1011 aa14.05□□□□□ -0.16
CLDN4-202ENST00000431918 IL1RAPL2Q9NP60 686 aa14.05□□□□□ -0.16
CLDN4-202ENST00000431918 PNPLA6Q8IY17 1366 aa14.05□□□□□ -0.16
CLDN4-202ENST00000431918 MYO3AQ8NEV4 1616 aa14.05□□□□□ -0.16
CLDN4-202ENST00000431918 GNAI3P08754 354 aa14.05□□□□□ -0.16
CLDN4-202ENST00000431918 HOXC9P31274 260 aa14.05□□□□□ -0.16
CLDN4-202ENST00000431918 CHL1O00533 1208 aa14.04□□□□□ -0.16
CLDN4-202ENST00000431918 INTS3Q68E01 1043 aaKnown RBP14.04□□□□□ -0.16
CLDN4-202ENST00000431918 PLEKHG1Q9ULL1 1385 aa14.04□□□□□ -0.16
CLDN4-202ENST00000431918 IQSEC2Q5JU85 1478 aa14.04□□□□□ -0.16
CLDN4-202ENST00000431918 CD163L1Q9NR16 1453 aa14.04□□□□□ -0.16
CLDN4-202ENST00000431918 KCNJ4P48050 445 aa14.04□□□□□ -0.16
CLDN4-202ENST00000431918 TBC1D9Q6ZT07 1266 aa14.04□□□□□ -0.16
CLDN4-202ENST00000431918 ANO2Q9NQ90 1003 aa14.04□□□□□ -0.16
CLDN4-202ENST00000431918 ORAI2Q96SN7 254 aa14.03□□□□□ -0.16
CLDN4-202ENST00000431918 AATKQ6ZMQ8 1374 aa14.03□□□□□ -0.16
CLDN4-202ENST00000431918 MCCP23508 829 aa14.03□□□□□ -0.16
CLDN4-202ENST00000431918 BTBD11A6QL63 1104 aa14.03□□□□□ -0.16
CLDN4-202ENST00000431918 LRRC7Q96NW7 1537 aa14.02□□□□□ -0.16
CLDN4-202ENST00000431918 CCDC9Q9Y3X0 531 aaKnown RBP14.02□□□□□ -0.16
CLDN4-202ENST00000431918 HSP90AA2PQ14568 343 aaPredicted RBP14.02□□□□□ -0.17
CLDN4-202ENST00000431918 GBP4Q96PP9 640 aa14.02□□□□□ -0.17
CLDN4-202ENST00000431918 USP6P35125 1406 aa14.02□□□□□ -0.17
CLDN4-202ENST00000431918 BMP2KLQ5H9B9 411 aa14.02□□□□□ -0.17
CLDN4-202ENST00000431918 OTUD7AQ8TE49 926 aaPredicted RBP14.02□□□□□ -0.17
CLDN4-202ENST00000431918 MAP4K4O95819 1239 aaPredicted RBP14.01□□□□□ -0.17
CLDN4-202ENST00000431918 CHMP3Q9Y3E7 222 aa14.01□□□□□ -0.17
CLDN4-202ENST00000431918 LRRFIP2Q9Y608 721 aaKnown RBP14.01□□□□□ -0.17
CLDN4-202ENST00000431918 CPS1P31327 1500 aa14.01□□□□□ -0.17
CLDN4-202ENST00000431918 PTPRCP08575 1304 aa14.01□□□□□ -0.17
CLDN4-202ENST00000431918 KCNH5Q8NCM2 988 aa14.01□□□□□ -0.17
CLDN4-202ENST00000431918 AGLP35573 1532 aa14.01□□□□□ -0.17
CLDN4-202ENST00000431918 REC8O95072 547 aa14□□□□□ -0.17
CLDN4-202ENST00000431918 ZNF853P0CG23 659 aa14□□□□□ -0.17
CLDN4-202ENST00000431918 FOXD4L6Q3SYB3 417 aaPredicted RBP14□□□□□ -0.17
CLDN4-202ENST00000431918 FOXD4L3Q6VB84 417 aaPredicted RBP14□□□□□ -0.17
CLDN4-202ENST00000431918 SRCIN1Q9C0H9 1055 aa14□□□□□ -0.17
CLDN4-202ENST00000431918 CPSF1Q10570 1443 aaKnown RBP14□□□□□ -0.17
CLDN4-202ENST00000431918 KIAA1211Q6ZU35 1233 aa14□□□□□ -0.17
CLDN4-202ENST00000431918 RBM42Q9BTD8 480 aaKnown RBP14□□□□□ -0.17
CLDN4-202ENST00000431918 SBNO1A3KN83 1393 aa14□□□□□ -0.17
CLDN4-202ENST00000431918 NLRP1Q9C000 1473 aa14□□□□□ -0.17
CLDN4-202ENST00000431918 ST18O60284 1047 aa14□□□□□ -0.17
CLDN4-202ENST00000431918 CHMP4AQ9BY43 222 aa14□□□□□ -0.17
CLDN4-202ENST00000431918 ANKRD44Q8N8A2 993 aa14□□□□□ -0.17
CLDN4-202ENST00000431918 LRRCC1Q9C099 1032 aa14□□□□□ -0.17
CLDN4-202ENST00000431918 MSH6P52701 1360 aa13.99□□□□□ -0.17
CLDN4-202ENST00000431918 CEP85Q6P2H3 762 aa13.99□□□□□ -0.17
CLDN4-202ENST00000431918 KRT28Q7Z3Y7 464 aa13.99□□□□□ -0.17
CLDN4-202ENST00000431918 ANP32BQ92688 251 aaKnown RBP13.99□□□□□ -0.17
CLDN4-202ENST00000431918 CDK12Q9NYV4 1490 aaPredicted RBP13.99□□□□□ -0.17
CLDN4-202ENST00000431918 SRGAP3O43295 1099 aa13.99□□□□□ -0.17
CLDN4-202ENST00000431918 MYL6BP14649 208 aa13.98□□□□□ -0.17
CLDN4-202ENST00000431918 MED14O60244 1454 aa13.98□□□□□ -0.17
CLDN4-202ENST00000431918 NUTM1Q86Y26 1132 aa13.98□□□□□ -0.17
CLDN4-202ENST00000431918 TTC5Q8N0Z6 440 aa13.98□□□□□ -0.17
CLDN4-202ENST00000431918 SETD1BQ9UPS6 1966 aaKnown RBP13.98□□□□□ -0.17
CLDN4-202ENST00000431918 RIC3Q7Z5B4 369 aa13.98□□□□□ -0.17
CLDN4-202ENST00000431918 ABCC4O15439 1325 aa13.98□□□□□ -0.17
CLDN4-202ENST00000431918 PHAXQ9H814 394 aaKnown RBP13.97□□□□□ -0.17
CLDN4-202ENST00000431918 LGR6Q9HBX8 967 aa13.97□□□□□ -0.17
CLDN4-202ENST00000431918 ANKRD24Q8TF21 1146 aa13.97□□□□□ -0.17
CLDN4-202ENST00000431918 DCTPP1Q9H773 170 aa13.97□□□□□ -0.17
CLDN4-202ENST00000431918 CHRNA2Q15822 529 aa13.97□□□□□ -0.17
CLDN4-202ENST00000431918 NBPF6Q5VWK0 638 aa13.97□□□□□ -0.17
CLDN4-202ENST00000431918 SIRT2Q8IXJ6 389 aa13.97□□□□□ -0.17
CLDN4-202ENST00000431918 CABLES1Q8TDN4 633 aa13.97□□□□□ -0.17
CLDN4-202ENST00000431918 NBPF4Q96M43 638 aa13.97□□□□□ -0.17
CLDN4-202ENST00000431918 ADAMTS13Q76LX8 1427 aa13.97□□□□□ -0.17
CLDN4-202ENST00000431918 USP19O94966 1318 aa13.96□□□□□ -0.17
CLDN4-202ENST00000431918 PI4KAP2A4QPH2 592 aa13.96□□□□□ -0.17
CLDN4-202ENST00000431918 GCP02774 474 aa13.96□□□□□ -0.17
CLDN4-202ENST00000431918 PI4KAP1Q8N8J0 262 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms