RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 MTHFSDQ2M296 383 aaKnown RBP17.71■□□□□ 0.42
RBM39-212ENST00000429968 DDRGK1Q96HY6 314 aa17.71■□□□□ 0.42
RBM39-212ENST00000429968 EYA1Q99502 592 aa17.71■□□□□ 0.42
RBM39-212ENST00000429968 MIS18AQ9NYP9 233 aa17.7■□□□□ 0.42
RBM39-212ENST00000429968 KDRP35968 1356 aa17.69■□□□□ 0.42
RBM39-212ENST00000429968 RGS12O14924 1447 aa17.69■□□□□ 0.42
RBM39-212ENST00000429968 CHL1O00533 1208 aa17.69■□□□□ 0.42
RBM39-212ENST00000429968 PDIA4P13667 645 aaKnown RBP17.69■□□□□ 0.42
RBM39-212ENST00000429968 ARHGAP45Q92619 1136 aa17.68■□□□□ 0.42
RBM39-212ENST00000429968 IGSF1Q8N6C5 1336 aa17.68■□□□□ 0.42
RBM39-212ENST00000429968 AMPHP49418 695 aa17.68■□□□□ 0.42
RBM39-212ENST00000429968 SIRT2Q8IXJ6 389 aa17.68■□□□□ 0.42
RBM39-212ENST00000429968 RGPD2P0DJD1 1756 aa17.67■□□□□ 0.42
RBM39-212ENST00000429968 LRRC37A3O60309 1634 aa17.66■□□□□ 0.42
RBM39-212ENST00000429968 HOXC9P31274 260 aa17.66■□□□□ 0.42
RBM39-212ENST00000429968 ANKLE2Q86XL3 938 aa17.66■□□□□ 0.42
RBM39-212ENST00000429968 ABTB2Q8N961 1025 aa17.65■□□□□ 0.42
RBM39-212ENST00000429968 LNPKQ9C0E8 428 aa17.64■□□□□ 0.41
RBM39-212ENST00000429968 PHF8Q9UPP1 1060 aa17.63■□□□□ 0.41
RBM39-212ENST00000429968 NUCB1Q02818 461 aa17.63■□□□□ 0.41
RBM39-212ENST00000429968 LTV1Q96GA3 475 aaPredicted RBP17.63■□□□□ 0.41
RBM39-212ENST00000429968 NFAT5O94916 1531 aa17.62■□□□□ 0.41
RBM39-212ENST00000429968 USHBP1Q8N6Y0 703 aa17.62■□□□□ 0.41
RBM39-212ENST00000429968 C14orf37Q86TY3 774 aa17.62■□□□□ 0.41
RBM39-212ENST00000429968 KIAA0232Q92628 1395 aa17.61■□□□□ 0.41
RBM39-212ENST00000429968 ADGRL3Q9HAR2 1447 aa17.61■□□□□ 0.41
RBM39-212ENST00000429968 TBC1D32Q96NH3 1257 aa17.6■□□□□ 0.41
RBM39-212ENST00000429968 FAM208AQ9UK61 1670 aaKnown RBP17.59■□□□□ 0.41
RBM39-212ENST00000429968 G2E3Q7L622 706 aa17.59■□□□□ 0.41
RBM39-212ENST00000429968 CHD1LQ86WJ1 897 aa17.59■□□□□ 0.41
RBM39-212ENST00000429968 API5Q9BZZ5 524 aaKnown RBP17.59■□□□□ 0.41
RBM39-212ENST00000429968 FBXO3Q9UK99 471 aa17.59■□□□□ 0.41
RBM39-212ENST00000429968 MSH6P52701 1360 aa17.58■□□□□ 0.4
RBM39-212ENST00000429968 DEKP35659 375 aaKnown RBP17.58■□□□□ 0.4
RBM39-212ENST00000429968 ESCO1Q5FWF5 840 aa17.58■□□□□ 0.4
RBM39-212ENST00000429968 NPHP4O75161 1426 aaPredicted RBP17.58■□□□□ 0.4
RBM39-212ENST00000429968 ATP10DQ9P241 1426 aa17.58■□□□□ 0.4
RBM39-212ENST00000429968 XPCQ01831 940 aaPredicted RBP17.57■□□□□ 0.4
RBM39-212ENST00000429968 TSPYL4Q9UJ04 414 aa17.57■□□□□ 0.4
RBM39-212ENST00000429968 ANKRD45Q5TZF3 282 aa17.57■□□□□ 0.4
RBM39-212ENST00000429968 ORAI2Q96SN7 254 aa17.57■□□□□ 0.4
RBM39-212ENST00000429968 INTS3Q68E01 1043 aaKnown RBP17.56■□□□□ 0.4
RBM39-212ENST00000429968 IL17REQ8NFR9 667 aa17.56■□□□□ 0.4
RBM39-212ENST00000429968 RTF1Q92541 710 aaKnown RBP17.56■□□□□ 0.4
RBM39-212ENST00000429968 KIF24Q5T7B8 1368 aa17.55■□□□□ 0.4
RBM39-212ENST00000429968 SLC4A2P04920 1241 aa17.55■□□□□ 0.4
RBM39-212ENST00000429968 GAS2L2Q8NHY3 880 aa17.55■□□□□ 0.4
RBM39-212ENST00000429968 MFAP1P55081 439 aaKnown RBP17.54■□□□□ 0.4
RBM39-212ENST00000429968 F6X3S4 739 aa17.54■□□□□ 0.4
RBM39-212ENST00000429968 MEIS3Q99687 375 aa17.54■□□□□ 0.4
RBM39-212ENST00000429968 RTL5Q5HYW3 569 aaPredicted RBP17.53■□□□□ 0.4
RBM39-212ENST00000429968 NBPF6Q5VWK0 638 aa17.53■□□□□ 0.4
RBM39-212ENST00000429968 NBPF4Q96M43 638 aa17.53■□□□□ 0.4
RBM39-212ENST00000429968 TRPM3Q9HCF6 1732 aaPredicted RBP17.53■□□□□ 0.4
RBM39-212ENST00000429968 RGPD5Q99666 1765 aa17.53■□□□□ 0.4
RBM39-212ENST00000429968 PHRF1Q9P1Y6 1649 aaKnown RBP17.53■□□□□ 0.4
RBM39-212ENST00000429968 ZBTB7CA1YPR0 619 aa17.53■□□□□ 0.4
RBM39-212ENST00000429968 GNAT3A8MTJ3 354 aa17.53■□□□□ 0.4
RBM39-212ENST00000429968 GCC1Q96CN9 775 aa17.53■□□□□ 0.4
RBM39-212ENST00000429968 PSME1Q06323 249 aa17.52■□□□□ 0.4
RBM39-212ENST00000429968 NFKBIBQ15653 356 aa17.52■□□□□ 0.4
RBM39-212ENST00000429968 NECTIN2Q92692 538 aa17.52■□□□□ 0.4
RBM39-212ENST00000429968 RTL1A6NKG5 1358 aa17.52■□□□□ 0.4
RBM39-212ENST00000429968 MAP3K5Q99683 1374 aa17.52■□□□□ 0.4
RBM39-212ENST00000429968 IP6K1Q92551 441 aa17.51■□□□□ 0.39
RBM39-212ENST00000429968 LRRC59Q96AG4 307 aaKnown RBP17.51■□□□□ 0.39
RBM39-212ENST00000429968 STRCP1A6NGW2 1772 aa17.5■□□□□ 0.39
RBM39-212ENST00000429968 PTPRCP08575 1304 aa17.5■□□□□ 0.39
RBM39-212ENST00000429968 CEP85Q6P2H3 762 aa17.5■□□□□ 0.39
RBM39-212ENST00000429968 TBC1D2Q9BYX2 928 aa17.5■□□□□ 0.39
RBM39-212ENST00000429968 C16orf71Q8IYS4 520 aaPredicted RBP17.49■□□□□ 0.39
RBM39-212ENST00000429968 C22orf23Q9BZE7 217 aa17.49■□□□□ 0.39
RBM39-212ENST00000429968 CHMP4BQ9H444 224 aaKnown RBP17.49■□□□□ 0.39
RBM39-212ENST00000429968 UPF2Q9HAU5 1272 aaKnown RBP17.49■□□□□ 0.39
RBM39-212ENST00000429968 CACNA1FO60840 1977 aa17.49■□□□□ 0.39
RBM39-212ENST00000429968 ANKRD44Q8N8A2 993 aa17.48■□□□□ 0.39
RBM39-212ENST00000429968 MED1Q15648 1581 aaPredicted RBP17.48■□□□□ 0.39
RBM39-212ENST00000429968 OTUD7AQ8TE49 926 aaPredicted RBP17.48■□□□□ 0.39
RBM39-212ENST00000429968 DCTPP1Q9H773 170 aa17.48■□□□□ 0.39
RBM39-212ENST00000429968 KDM3BQ7LBC6 1761 aa17.48■□□□□ 0.39
RBM39-212ENST00000429968 N4BP2Q86UW6 1770 aaPredicted RBP17.48■□□□□ 0.39
RBM39-212ENST00000429968 LMO7Q8WWI1 1683 aa17.47■□□□□ 0.39
RBM39-212ENST00000429968 SLIT3O75094 1523 aa17.47■□□□□ 0.39
RBM39-212ENST00000429968 HTATSF1O43719 755 aaKnown RBP17.47■□□□□ 0.39
RBM39-212ENST00000429968 BMP2KLQ5H9B9 411 aa17.47■□□□□ 0.39
RBM39-212ENST00000429968 SLC4A10Q6U841 1118 aa17.47■□□□□ 0.39
RBM39-212ENST00000429968 GSPT1P15170 499 aaKnown RBP17.47■□□□□ 0.39
RBM39-212ENST00000429968 SLKQ9H2G2 1235 aaPredicted RBP17.47■□□□□ 0.39
RBM39-212ENST00000429968 LGR6Q9HBX8 967 aa17.47■□□□□ 0.39
RBM39-212ENST00000429968 PXDNQ92626 1479 aa17.46■□□□□ 0.39
RBM39-212ENST00000429968 FRAT2O75474 233 aaPredicted RBP17.46■□□□□ 0.39
RBM39-212ENST00000429968 HAP1P54257 671 aaPredicted RBP17.46■□□□□ 0.39
RBM39-212ENST00000429968 SMARCA5O60264 1052 aaPredicted RBP17.45■□□□□ 0.38
RBM39-212ENST00000429968 PLEKHM2Q8IWE5 1019 aa17.45■□□□□ 0.38
RBM39-212ENST00000429968 CEMIPQ8WUJ3 1361 aa17.45■□□□□ 0.38
RBM39-212ENST00000429968 GCP02774 474 aa17.44■□□□□ 0.38
RBM39-212ENST00000429968 ANTXR1Q9H6X2 564 aa17.44■□□□□ 0.38
RBM39-212ENST00000429968 USP35Q9P2H5 1018 aa17.44■□□□□ 0.38
RBM39-212ENST00000429968 APBB1O00213 710 aa17.44■□□□□ 0.38
RBM39-212ENST00000429968 KCNQ3O43525 872 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms