RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ZFP91Q96JP5 570 aaPredicted RBP9.93□□□□□ -0.82
HPS4-205ENST00000429411 CEP152O94986 1710 aa9.93□□□□□ -0.82
HPS4-205ENST00000429411 SMC5Q8IY18 1101 aa9.92□□□□□ -0.82
HPS4-205ENST00000429411 C19orf44Q9H6X5 657 aa9.92□□□□□ -0.82
HPS4-205ENST00000429411 NUDT16Q96DE0 195 aaKnown RBP9.92□□□□□ -0.82
HPS4-205ENST00000429411 GRPEL1Q9HAV7 217 aa9.92□□□□□ -0.82
HPS4-205ENST00000429411 RRAGDQ9NQL2 400 aaPredicted RBP9.92□□□□□ -0.82
HPS4-205ENST00000429411 VAMP4O75379 141 aa9.92□□□□□ -0.82
HPS4-205ENST00000429411 SPHKAPQ2M3C7 1700 aa9.92□□□□□ -0.82
HPS4-205ENST00000429411 CADPS2Q86UW7 1296 aa9.92□□□□□ -0.82
HPS4-205ENST00000429411 GCC1Q96CN9 775 aa9.92□□□□□ -0.82
HPS4-205ENST00000429411 DEPDC5O75140 1603 aa9.91□□□□□ -0.82
HPS4-205ENST00000429411 K7ELQ4 463 aaPredicted RBP9.91□□□□□ -0.82
HPS4-205ENST00000429411 CAVIN1Q6NZI2 390 aaKnown RBP9.91□□□□□ -0.82
HPS4-205ENST00000429411 OTUD7AQ8TE49 926 aaPredicted RBP9.91□□□□□ -0.82
HPS4-205ENST00000429411 PLEKHF1Q96S99 279 aa9.91□□□□□ -0.82
HPS4-205ENST00000429411 STK31Q9BXU1 1019 aa9.91□□□□□ -0.82
HPS4-205ENST00000429411 TSPYL4Q9UJ04 414 aa9.91□□□□□ -0.82
HPS4-205ENST00000429411 C3P01024 1663 aa9.91□□□□□ -0.82
HPS4-205ENST00000429411 NLRP1Q9C000 1473 aa9.91□□□□□ -0.82
HPS4-205ENST00000429411 PTMAP06454 111 aaKnown RBP9.91□□□□□ -0.82
HPS4-205ENST00000429411 OS9Q13438 667 aaPredicted RBP9.91□□□□□ -0.82
HPS4-205ENST00000429411 FKBP5Q13451 457 aaPredicted RBP9.91□□□□□ -0.82
HPS4-205ENST00000429411 EXOC6BQ9Y2D4 811 aa9.91□□□□□ -0.82
HPS4-205ENST00000429411 CEP170BQ9Y4F5 1589 aaPredicted RBP9.91□□□□□ -0.82
HPS4-205ENST00000429411 EIF2S2P20042 333 aaKnown RBP9.91□□□□□ -0.82
HPS4-205ENST00000429411 MRE11P49959 708 aa9.91□□□□□ -0.82
HPS4-205ENST00000429411 ANTXR1Q9H6X2 564 aa9.91□□□□□ -0.82
HPS4-205ENST00000429411 EFCAB6Q5THR3 1501 aa9.91□□□□□ -0.82
HPS4-205ENST00000429411 MPNDQ8N594 471 aa9.9□□□□□ -0.82
HPS4-205ENST00000429411 C8orf37Q96NL8 207 aa9.9□□□□□ -0.82
HPS4-205ENST00000429411 ANO2Q9NQ90 1003 aa9.9□□□□□ -0.82
HPS4-205ENST00000429411 ALDH1L2Q3SY69 923 aa9.9□□□□□ -0.82
HPS4-205ENST00000429411 MRPL50Q8N5N7 158 aaKnown RBP9.9□□□□□ -0.82
HPS4-205ENST00000429411 ZBTB7BO15156 539 aaPredicted RBP9.9□□□□□ -0.83
HPS4-205ENST00000429411 ST18O60284 1047 aa9.9□□□□□ -0.83
HPS4-205ENST00000429411 CD2BP2O95400 341 aaKnown RBP9.9□□□□□ -0.83
HPS4-205ENST00000429411 MSNP26038 577 aaKnown RBP9.89□□□□□ -0.83
HPS4-205ENST00000429411 CNPY4Q8N129 248 aa9.89□□□□□ -0.83
HPS4-205ENST00000429411 RNF214Q8ND24 703 aa9.89□□□□□ -0.83
HPS4-205ENST00000429411 GAS2L2Q8NHY3 880 aa9.89□□□□□ -0.83
HPS4-205ENST00000429411 NSD2O96028 1365 aa9.89□□□□□ -0.83
HPS4-205ENST00000429411 ABCC11Q96J66 1382 aa9.89□□□□□ -0.83
HPS4-205ENST00000429411 PRPF40AO75400 957 aaKnown RBP9.89□□□□□ -0.83
HPS4-205ENST00000429411 MAP4K4O95819 1239 aaPredicted RBP9.89□□□□□ -0.83
HPS4-205ENST00000429411 HSP90AB2PQ58FF8 381 aa9.89□□□□□ -0.83
HPS4-205ENST00000429411 BMP2KLQ5H9B9 411 aa9.89□□□□□ -0.83
HPS4-205ENST00000429411 HMMRO75330 724 aa9.88□□□□□ -0.83
HPS4-205ENST00000429411 HMGB1P09429 215 aaKnown RBP9.88□□□□□ -0.83
HPS4-205ENST00000429411 NEK4P51957 841 aa9.88□□□□□ -0.83
HPS4-205ENST00000429411 INTS3Q68E01 1043 aaKnown RBP9.88□□□□□ -0.83
HPS4-205ENST00000429411 MEIS3Q99687 375 aa9.88□□□□□ -0.83
HPS4-205ENST00000429411 CCDC61Q9Y6R9 512 aa9.88□□□□□ -0.83
HPS4-205ENST00000429411 SBNO2Q9Y2G9 1366 aa9.88□□□□□ -0.83
HPS4-205ENST00000429411 LAMC1P11047 1609 aa9.88□□□□□ -0.83
HPS4-205ENST00000429411 KIF1BO60333 1816 aa9.88□□□□□ -0.83
HPS4-205ENST00000429411 IQGAP1P46940 1657 aa9.88□□□□□ -0.83
HPS4-205ENST00000429411 NGLY1Q96IV0 654 aa9.88□□□□□ -0.83
HPS4-205ENST00000429411 TET3O43151 1660 aa9.88□□□□□ -0.83
HPS4-205ENST00000429411 MROH1Q8NDA8 1641 aa9.88□□□□□ -0.83
HPS4-205ENST00000429411 NAP1L2Q9ULW6 460 aaPredicted RBP9.88□□□□□ -0.83
HPS4-205ENST00000429411 WASLO00401 505 aaPredicted RBP9.87□□□□□ -0.83
HPS4-205ENST00000429411 CHAMP1Q96JM3 812 aa9.87□□□□□ -0.83
HPS4-205ENST00000429411 IFT57Q9NWB7 429 aa9.87□□□□□ -0.83
HPS4-205ENST00000429411 MYOM2P54296 1465 aa9.87□□□□□ -0.83
HPS4-205ENST00000429411 NASPP49321 788 aaPredicted RBP9.87□□□□□ -0.83
HPS4-205ENST00000429411 ZC3H6P61129 1189 aaKnown RBP9.87□□□□□ -0.83
HPS4-205ENST00000429411 DNTTIP2Q5QJE6 756 aaKnown RBP9.87□□□□□ -0.83
HPS4-205ENST00000429411 IL1RAPL2Q9NP60 686 aa9.87□□□□□ -0.83
HPS4-205ENST00000429411 VWDEQ8N2E2 1590 aa9.87□□□□□ -0.83
HPS4-205ENST00000429411 DTNBO60941 627 aa9.87□□□□□ -0.83
HPS4-205ENST00000429411 LARP6Q9BRS8 491 aaKnown RBP9.86□□□□□ -0.83
HPS4-205ENST00000429411 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.86□□□□□ -0.83
HPS4-205ENST00000429411 IL16Q14005 1332 aa9.86□□□□□ -0.83
HPS4-205ENST00000429411 RNF17Q9BXT8 1623 aaKnown RBP9.86□□□□□ -0.83
HPS4-205ENST00000429411 TMED8Q6PL24 325 aaPredicted RBP9.86□□□□□ -0.83
HPS4-205ENST00000429411 UPF3BQ9BZI7 483 aaKnown RBP9.86□□□□□ -0.83
HPS4-205ENST00000429411 ARHGAP31Q2M1Z3 1444 aa9.86□□□□□ -0.83
HPS4-205ENST00000429411 YTHDC2Q9H6S0 1430 aaKnown RBP9.86□□□□□ -0.83
HPS4-205ENST00000429411 MCCP23508 829 aa9.85□□□□□ -0.83
HPS4-205ENST00000429411 KCNJ4P48050 445 aa9.85□□□□□ -0.83
HPS4-205ENST00000429411 NLRP6P59044 892 aa9.85□□□□□ -0.83
HPS4-205ENST00000429411 SKOR2Q2VWA4 1001 aaPredicted RBP9.85□□□□□ -0.83
HPS4-205ENST00000429411 ESPNB1AK53 854 aa9.85□□□□□ -0.83
HPS4-205ENST00000429411 REC8O95072 547 aa9.85□□□□□ -0.83
HPS4-205ENST00000429411 STRN4Q9NRL3 753 aa9.85□□□□□ -0.83
HPS4-205ENST00000429411 ROBO2Q9HCK4 1378 aa9.85□□□□□ -0.83
HPS4-205ENST00000429411 SDSP20132 328 aa9.84□□□□□ -0.83
HPS4-205ENST00000429411 SIRT2Q8IXJ6 389 aa9.84□□□□□ -0.83
HPS4-205ENST00000429411 ZGPATQ8N5A5 531 aaKnown RBP9.84□□□□□ -0.83
HPS4-205ENST00000429411 USHBP1Q8N6Y0 703 aa9.84□□□□□ -0.83
HPS4-205ENST00000429411 RBM27Q9P2N5 1060 aaKnown RBP9.84□□□□□ -0.83
HPS4-205ENST00000429411 PLEKHM2Q8IWE5 1019 aa9.84□□□□□ -0.83
HPS4-205ENST00000429411 RABEP1Q15276 862 aa9.84□□□□□ -0.83
HPS4-205ENST00000429411 G2E3Q7L622 706 aa9.84□□□□□ -0.83
HPS4-205ENST00000429411 IL13P35225 146 aa9.83□□□□□ -0.84
HPS4-205ENST00000429411 PKP1Q13835 747 aa9.83□□□□□ -0.84
HPS4-205ENST00000429411 EIF4A2Q14240 407 aaKnown RBP9.83□□□□□ -0.84
HPS4-205ENST00000429411 CHRNA2Q15822 529 aa9.83□□□□□ -0.84
HPS4-205ENST00000429411 GAS2L3Q86XJ1 694 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms