RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 ZNF622Q969S3 477 aaKnown RBP eCLIP10.17□□□□□ -0.782e-6■■■□□ 14.6
CHD7-201ENST00000423902 SETDB2Q96T68 719 aa10.17□□□□□ -0.78
CHD7-201ENST00000423902 PARP3Q9Y6F1 533 aa10.17□□□□□ -0.78
CHD7-201ENST00000423902 XBP1P17861 261 aa10.17□□□□□ -0.78
CHD7-201ENST00000423902 ZNF428Q96B54 188 aa10.17□□□□□ -0.78
CHD7-201ENST00000423902 RTCBQ9Y3I0 505 aaKnown RBP10.17□□□□□ -0.78
CHD7-201ENST00000423902 AK9Q5TCS8 1911 aa10.17□□□□□ -0.78
CHD7-201ENST00000423902 NYXQ9GZU5 481 aa10.17□□□□□ -0.78
CHD7-201ENST00000423902 NPHP4O75161 1426 aaPredicted RBP10.17□□□□□ -0.78
CHD7-201ENST00000423902 BRMS1Q9HCU9 246 aa10.16□□□□□ -0.78
CHD7-201ENST00000423902 TET3O43151 1660 aa10.16□□□□□ -0.78
CHD7-201ENST00000423902 MYO1BO43795 1136 aa10.16□□□□□ -0.78
CHD7-201ENST00000423902 MLH3Q9UHC1 1453 aa10.16□□□□□ -0.78
CHD7-201ENST00000423902 CDC5LQ99459 802 aaKnown RBP10.16□□□□□ -0.78
CHD7-201ENST00000423902 SRCIN1Q9C0H9 1055 aa10.16□□□□□ -0.78
CHD7-201ENST00000423902 SYAP1Q96A49 352 aaPredicted RBP10.16□□□□□ -0.78
CHD7-201ENST00000423902 YTHDC2Q9H6S0 1430 aaKnown RBP10.16□□□□□ -0.78
CHD7-201ENST00000423902 CENPQQ7L2Z9 268 aaPredicted RBP10.16□□□□□ -0.78
CHD7-201ENST00000423902 NBPF6Q5VWK0 638 aa10.15□□□□□ -0.78
CHD7-201ENST00000423902 NBPF5PQ86XG9 351 aaPredicted RBP10.15□□□□□ -0.78
CHD7-201ENST00000423902 NBPF4Q96M43 638 aa10.15□□□□□ -0.78
CHD7-201ENST00000423902 CEP126Q9P2H0 1117 aa10.15□□□□□ -0.78
CHD7-201ENST00000423902 TRPC5Q9UL62 973 aaPredicted RBP10.15□□□□□ -0.78
CHD7-201ENST00000423902 TMEM2Q9UHN6 1383 aa10.15□□□□□ -0.78
CHD7-201ENST00000423902 USHBP1Q8N6Y0 703 aa10.15□□□□□ -0.78
CHD7-201ENST00000423902 SURF6O75683 361 aaKnown RBP10.15□□□□□ -0.78
CHD7-201ENST00000423902 SAFBQ15424 915 aaKnown RBP eCLIP10.15□□□□□ -0.78
CHD7-201ENST00000423902 CLASP1Q7Z460 1538 aa10.15□□□□□ -0.78
CHD7-201ENST00000423902 ANKRD36BQ8N2N9 1353 aa10.15□□□□□ -0.78
CHD7-201ENST00000423902 AKAP2Q9Y2D5 859 aa10.15□□□□□ -0.78
CHD7-201ENST00000423902 GBP4Q96PP9 640 aa10.15□□□□□ -0.78
CHD7-201ENST00000423902 ADAMTS8Q9UP79 889 aa10.15□□□□□ -0.78
CHD7-201ENST00000423902 RXRBP28702 533 aa10.15□□□□□ -0.79
CHD7-201ENST00000423902 PLXNC1O60486 1568 aa10.15□□□□□ -0.79
CHD7-201ENST00000423902 PCDH11XQ9BZA7 1347 aa10.14□□□□□ -0.79
CHD7-201ENST00000423902 PCDH11YQ9BZA8 1340 aa10.14□□□□□ -0.79
CHD7-201ENST00000423902 PTPRKQ15262 1439 aa10.14□□□□□ -0.79
CHD7-201ENST00000423902 CCDC47Q96A33 483 aaKnown RBP10.14□□□□□ -0.79
CHD7-201ENST00000423902 ACSBG1Q96GR2 724 aa10.14□□□□□ -0.79
CHD7-201ENST00000423902 ATP2B2Q01814 1243 aa10.14□□□□□ -0.79
CHD7-201ENST00000423902 ABCA9Q8IUA7 1624 aa10.14□□□□□ -0.79
CHD7-201ENST00000423902 ARAP3Q8WWN8 1544 aa10.13□□□□□ -0.79
CHD7-201ENST00000423902 TRMT112Q9UI30 125 aaKnown RBP10.13□□□□□ -0.79
CHD7-201ENST00000423902 PLCB2Q00722 1185 aa10.13□□□□□ -0.79
CHD7-201ENST00000423902 ADGRL2O95490 1459 aa10.13□□□□□ -0.79
CHD7-201ENST00000423902 ANO2Q9NQ90 1003 aa10.13□□□□□ -0.79
CHD7-201ENST00000423902 R3HCC1Q9Y3T6 440 aaKnown RBP10.13□□□□□ -0.79
CHD7-201ENST00000423902 ABCC11Q96J66 1382 aa10.13□□□□□ -0.79
CHD7-201ENST00000423902 SNRPA1P09661 255 aaKnown RBP10.13□□□□□ -0.79
CHD7-201ENST00000423902 IFIT1P09914 478 aaKnown RBP10.13□□□□□ -0.79
CHD7-201ENST00000423902 IFIT5Q13325 482 aaKnown RBP10.13□□□□□ -0.79
CHD7-201ENST00000423902 LMOD1P29536 600 aaPredicted RBP10.13□□□□□ -0.79
CHD7-201ENST00000423902 ATP6V1DQ9Y5K8 247 aa10.13□□□□□ -0.79
CHD7-201ENST00000423902 COG6Q9Y2V7 657 aa10.12□□□□□ -0.79
CHD7-201ENST00000423902 FSD1Q9BTV5 496 aa10.12□□□□□ -0.79
CHD7-201ENST00000423902 METTL24Q5JXM2 366 aa10.12□□□□□ -0.79
CHD7-201ENST00000423902 PUS7Q96PZ0 661 aaKnown RBP10.12□□□□□ -0.79
CHD7-201ENST00000423902 IFT57Q9NWB7 429 aa10.12□□□□□ -0.79
CHD7-201ENST00000423902 C6orf229H3BNL8 230 aa10.12□□□□□ -0.79
CHD7-201ENST00000423902 DBF4Q9UBU7 674 aaPredicted RBP10.12□□□□□ -0.79
CHD7-201ENST00000423902 TPM2P07951 284 aa10.12□□□□□ -0.79
CHD7-201ENST00000423902 TMPOP42166 694 aaKnown RBP10.12□□□□□ -0.79
CHD7-201ENST00000423902 LRP2BPQ9P2M1 347 aa10.12□□□□□ -0.79
CHD7-201ENST00000423902 HOOK1Q9UJC3 728 aaKnown RBP10.12□□□□□ -0.79
CHD7-201ENST00000423902 ATF7IPQ6VMQ6 1270 aa10.12□□□□□ -0.79
CHD7-201ENST00000423902 NF2P35240 595 aa10.11□□□□□ -0.79
CHD7-201ENST00000423902 ARHGEF12Q9NZN5 1544 aa10.11□□□□□ -0.79
CHD7-201ENST00000423902 ERCC6L2Q5T890 1561 aa10.11□□□□□ -0.79
CHD7-201ENST00000423902 INTS3Q68E01 1043 aaKnown RBP10.11□□□□□ -0.79
CHD7-201ENST00000423902 ASXL1Q8IXJ9 1541 aa10.11□□□□□ -0.79
CHD7-201ENST00000423902 PIK3C2GO75747 1445 aa10.11□□□□□ -0.79
CHD7-201ENST00000423902 SLC5A1P13866 664 aa10.11□□□□□ -0.79
CHD7-201ENST00000423902 CABLES1Q8TDN4 633 aa10.11□□□□□ -0.79
CHD7-201ENST00000423902 NBR1Q14596 966 aa10.11□□□□□ -0.79
CHD7-201ENST00000423902 TRAPPC3LQ5T215 181 aa10.11□□□□□ -0.79
CHD7-201ENST00000423902 FLAD1Q8NFF5 587 aa10.11□□□□□ -0.79
CHD7-201ENST00000423902 CLEC11AQ9Y240 323 aa10.11□□□□□ -0.79
CHD7-201ENST00000423902 DUSP27Q5VZP5 1158 aa10.1□□□□□ -0.79
CHD7-201ENST00000423902 COL17A1Q9UMD9 1497 aaPredicted RBP10.1□□□□□ -0.79
CHD7-201ENST00000423902 ANKRD18BA2A2Z9 1011 aa10.1□□□□□ -0.79
CHD7-201ENST00000423902 HDAC9Q9UKV0 1011 aa10.1□□□□□ -0.79
CHD7-201ENST00000423902 RALGAPBQ86X10 1494 aa10.1□□□□□ -0.79
CHD7-201ENST00000423902 RRP1P56182 461 aaKnown RBP10.1□□□□□ -0.79
CHD7-201ENST00000423902 DZIP1Q86YF9 867 aaKnown RBP10.1□□□□□ -0.79
CHD7-201ENST00000423902 RAI14Q9P0K7 980 aa10.1□□□□□ -0.79
CHD7-201ENST00000423902 CCDC152Q4G0S7 254 aa10.1□□□□□ -0.79
CHD7-201ENST00000423902 DRC7Q8IY82 874 aa10.1□□□□□ -0.79
CHD7-201ENST00000423902 CWC25Q9NXE8 425 aaPredicted RBP10.1□□□□□ -0.79
CHD7-201ENST00000423902 FLT4P35916 1363 aa10.1□□□□□ -0.79
CHD7-201ENST00000423902 PSMA5P28066 241 aa10.1□□□□□ -0.79
CHD7-201ENST00000423902 GCP02774 474 aa10.09□□□□□ -0.79
CHD7-201ENST00000423902 JDP2Q8WYK2 163 aa10.09□□□□□ -0.79
CHD7-201ENST00000423902 SPTY2D1Q68D10 685 aaPredicted RBP10.09□□□□□ -0.79
CHD7-201ENST00000423902 CRACR2BQ8N4Y2 399 aaPredicted RBP10.09□□□□□ -0.79
CHD7-201ENST00000423902 CEP89Q96ST8 783 aa10.09□□□□□ -0.79
CHD7-201ENST00000423902 OGFOD1Q8N543 542 aa10.09□□□□□ -0.79
CHD7-201ENST00000423902 FAM98CQ17RN3 349 aaKnown RBP10.09□□□□□ -0.79
CHD7-201ENST00000423902 MCTP1Q6DN14 999 aa10.09□□□□□ -0.79
CHD7-201ENST00000423902 ZC3H13Q5T200 1668 aaKnown RBP10.09□□□□□ -0.79
CHD7-201ENST00000423902 QTRT2Q9H974 415 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms