RNA–Protein interactions for RNA: ENST00000417504.5

PTPA-211, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-211ENST00000417504 CPSF1Q10570 1443 aaKnown RBP11.07□□□□□ -0.64
PTPA-211ENST00000417504 PIK3C2AO00443 1686 aa11.07□□□□□ -0.64
PTPA-211ENST00000417504 USP54Q70EL1 1684 aa11.07□□□□□ -0.64
PTPA-211ENST00000417504 ACEP12821 1306 aa11.07□□□□□ -0.64
PTPA-211ENST00000417504 ALS2Q96Q42 1657 aa11.06□□□□□ -0.64
PTPA-211ENST00000417504 PLEKHG3A1L390 1219 aa11.06□□□□□ -0.64
PTPA-211ENST00000417504 CGNL1Q0VF96 1302 aa11.06□□□□□ -0.64
PTPA-211ENST00000417504 NSD2O96028 1365 aa11.04□□□□□ -0.64
PTPA-211ENST00000417504 MARF1Q9Y4F3 1742 aaKnown RBP11.04□□□□□ -0.64
PTPA-211ENST00000417504 CNGB1Q14028 1251 aaPredicted RBP11.04□□□□□ -0.64
PTPA-211ENST00000417504 ARSIQ5FYB1 569 aa11.04□□□□□ -0.64
PTPA-211ENST00000417504 GPR153Q6NV75 609 aa11.04□□□□□ -0.64
PTPA-211ENST00000417504 ORAI2Q96SN7 254 aa11.04□□□□□ -0.64
PTPA-211ENST00000417504 SLAIN2Q9P270 581 aa11.04□□□□□ -0.64
PTPA-211ENST00000417504 AHDC1Q5TGY3 1603 aaPredicted RBP11.04□□□□□ -0.64
PTPA-211ENST00000417504 NPHP3Q7Z494 1330 aa11.04□□□□□ -0.64
PTPA-211ENST00000417504 BRD4O60885 1362 aaPredicted RBP11.03□□□□□ -0.64
PTPA-211ENST00000417504 SPDYE16A6NNV3 312 aaPredicted RBP11.03□□□□□ -0.64
PTPA-211ENST00000417504 ANP32CO43423 234 aa11.03□□□□□ -0.64
PTPA-211ENST00000417504 NBR1Q14596 966 aa11.03□□□□□ -0.64
PTPA-211ENST00000417504 PDIA6Q15084 440 aa11.03□□□□□ -0.64
PTPA-211ENST00000417504 ABCA3Q99758 1704 aa11.03□□□□□ -0.64
PTPA-211ENST00000417504 LTN1O94822 1766 aa11.03□□□□□ -0.64
PTPA-211ENST00000417504 MAP2P11137 1827 aaKnown RBP11.02□□□□□ -0.64
PTPA-211ENST00000417504 PHRF1Q9P1Y6 1649 aaKnown RBP11.02□□□□□ -0.64
PTPA-211ENST00000417504 PXDNQ92626 1479 aa11.02□□□□□ -0.65
PTPA-211ENST00000417504 EVI5O60447 810 aa11.02□□□□□ -0.65
PTPA-211ENST00000417504 PSME1Q06323 249 aa11.02□□□□□ -0.65
PTPA-211ENST00000417504 BRINP3Q76B58 766 aa11.02□□□□□ -0.65
PTPA-211ENST00000417504 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.02□□□□□ -0.65
PTPA-211ENST00000417504 TTC21AQ8NDW8 1320 aa11.02□□□□□ -0.65
PTPA-211ENST00000417504 CC2D1BQ5T0F9 858 aaKnown RBP11.01□□□□□ -0.65
PTPA-211ENST00000417504 KHSRPQ92945 711 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTPA-211ENST00000417504 NPC1L1Q9UHC9 1359 aa11.01□□□□□ -0.65
PTPA-211ENST00000417504 CRYBG1Q9Y4K1 1723 aa11.01□□□□□ -0.65
PTPA-211ENST00000417504 TNS3Q68CZ2 1445 aa11.01□□□□□ -0.65
PTPA-211ENST00000417504 COL16A1Q07092 1604 aaPredicted RBP11□□□□□ -0.65
PTPA-211ENST00000417504 FOXO3O43524 673 aa11□□□□□ -0.65
PTPA-211ENST00000417504 HOXB1P14653 301 aaPredicted RBP11□□□□□ -0.65
PTPA-211ENST00000417504 XPCQ01831 940 aaPredicted RBP11□□□□□ -0.65
PTPA-211ENST00000417504 CARD14Q9BXL6 1004 aa11□□□□□ -0.65
PTPA-211ENST00000417504 TTC21BQ7Z4L5 1316 aa11□□□□□ -0.65
PTPA-211ENST00000417504 NUDT7P0C024 238 aa10.99□□□□□ -0.65
PTPA-211ENST00000417504 FAM163AQ96GL9 167 aaPredicted RBP10.99□□□□□ -0.65
PTPA-211ENST00000417504 ANO8Q9HCE9 1232 aaPredicted RBP10.99□□□□□ -0.65
PTPA-211ENST00000417504 SEMA3EO15041 775 aa10.98□□□□□ -0.65
PTPA-211ENST00000417504 PER1O15534 1290 aaPredicted RBP10.98□□□□□ -0.65
PTPA-211ENST00000417504 ST18O60284 1047 aa10.98□□□□□ -0.65
PTPA-211ENST00000417504 LMOD2Q6P5Q4 547 aa10.98□□□□□ -0.65
PTPA-211ENST00000417504 KRT28Q7Z3Y7 464 aa10.98□□□□□ -0.65
PTPA-211ENST00000417504 NME9Q86XW9 330 aa10.98□□□□□ -0.65
PTPA-211ENST00000417504 SBNO1A3KN83 1393 aa10.98□□□□□ -0.65
PTPA-211ENST00000417504 ARHGEF10O15013 1369 aa10.98□□□□□ -0.65
PTPA-211ENST00000417504 PARD3Q8TEW0 1356 aa10.98□□□□□ -0.65
PTPA-211ENST00000417504 OVOS2A0A0J9YW53 1432 aa10.98□□□□□ -0.65
PTPA-211ENST00000417504 OVOS2Q6IE36 1432 aa10.98□□□□□ -0.65
PTPA-211ENST00000417504 SSH2Q76I76 1423 aa10.98□□□□□ -0.65
PTPA-211ENST00000417504 RALBP1Q15311 655 aa10.97□□□□□ -0.65
PTPA-211ENST00000417504 MORC1Q86VD1 984 aa10.97□□□□□ -0.65
PTPA-211ENST00000417504 COG3Q96JB2 828 aa10.97□□□□□ -0.65
PTPA-211ENST00000417504 GGNBP2Q9H3C7 697 aa10.97□□□□□ -0.65
PTPA-211ENST00000417504 SHPRHQ149N8 1683 aa10.97□□□□□ -0.65
PTPA-211ENST00000417504 COL22A1Q8NFW1 1626 aaPredicted RBP10.96□□□□□ -0.65
PTPA-211ENST00000417504 ABTB2Q8N961 1025 aa10.96□□□□□ -0.65
PTPA-211ENST00000417504 DDX17Q92841 729 aaKnown RBP10.96□□□□□ -0.65
PTPA-211ENST00000417504 SLIT3O75094 1523 aa10.95□□□□□ -0.66
PTPA-211ENST00000417504 MYBBP1AQ9BQG0 1328 aaKnown RBP10.95□□□□□ -0.66
PTPA-211ENST00000417504 PRKRIP1Q9H875 184 aaPredicted RBP10.95□□□□□ -0.66
PTPA-211ENST00000417504 USP31Q70CQ4 1352 aa10.94□□□□□ -0.66
PTPA-211ENST00000417504 SOS2Q07890 1332 aaPredicted RBP10.94□□□□□ -0.66
PTPA-211ENST00000417504 FYB1O15117 783 aa10.94□□□□□ -0.66
PTPA-211ENST00000417504 TNNT2P45379 298 aaPredicted RBP10.94□□□□□ -0.66
PTPA-211ENST00000417504 NUTM2GQ5VZR2 741 aa10.94□□□□□ -0.66
PTPA-211ENST00000417504 JCADQ9P266 1359 aa10.93□□□□□ -0.66
PTPA-211ENST00000417504 SPATA31A3Q5VYP0 1347 aa10.93□□□□□ -0.66
PTPA-211ENST00000417504 TESPA1A2RU30 521 aaPredicted RBP10.93□□□□□ -0.66
PTPA-211ENST00000417504 PTGER2P43116 358 aa10.93□□□□□ -0.66
PTPA-211ENST00000417504 NLRP13Q86W25 1043 aa10.93□□□□□ -0.66
PTPA-211ENST00000417504 NFAT5O94916 1531 aa10.93□□□□□ -0.66
PTPA-211ENST00000417504 RGPD5Q99666 1765 aa10.93□□□□□ -0.66
PTPA-211ENST00000417504 MLLT3P42568 568 aaPredicted RBP10.92□□□□□ -0.66
PTPA-211ENST00000417504 PEAK1Q9H792 1746 aa10.92□□□□□ -0.66
PTPA-211ENST00000417504 DDX12PQ92771 950 aa10.91□□□□□ -0.66
PTPA-211ENST00000417504 LHX6Q9UPM6 363 aa10.91□□□□□ -0.66
PTPA-211ENST00000417504 CDK12Q9NYV4 1490 aaPredicted RBP10.91□□□□□ -0.66
PTPA-211ENST00000417504 FAM208AQ9UK61 1670 aaKnown RBP10.91□□□□□ -0.66
PTPA-211ENST00000417504 USP19O94966 1318 aa10.9□□□□□ -0.66
PTPA-211ENST00000417504 PLCH1Q4KWH8 1693 aa10.9□□□□□ -0.66
PTPA-211ENST00000417504 LCE2DQ5TA82 110 aaPredicted RBP10.9□□□□□ -0.66
PTPA-211ENST00000417504 MEX3CQ5U5Q3 659 aaKnown RBP10.9□□□□□ -0.66
PTPA-211ENST00000417504 LRRC59Q96AG4 307 aaKnown RBP10.9□□□□□ -0.66
PTPA-211ENST00000417504 SMG6Q86US8 1419 aaKnown RBP10.9□□□□□ -0.66
PTPA-211ENST00000417504 AATKQ6ZMQ8 1374 aa10.9□□□□□ -0.67
PTPA-211ENST00000417504 ABCC6O95255 1503 aa10.89□□□□□ -0.67
PTPA-211ENST00000417504 GRXCR2A6NFK2 248 aa10.89□□□□□ -0.67
PTPA-211ENST00000417504 PPP2R1AP30153 589 aa10.89□□□□□ -0.67
PTPA-211ENST00000417504 ZNF772Q68DY9 489 aaPredicted RBP10.89□□□□□ -0.67
PTPA-211ENST00000417504 KCNH5Q8NCM2 988 aa10.89□□□□□ -0.67
PTPA-211ENST00000417504 MARVELD3Q96A59 401 aa10.89□□□□□ -0.67
PTPA-211ENST00000417504 CFAP53Q96M91 514 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms