RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 DLG5Q8TDM6 1919 aa15.88■□□□□ 0.13
LRRTM1-205ENST00000417012 TTC21BQ7Z4L5 1316 aa15.88■□□□□ 0.13
LRRTM1-205ENST00000417012 CDC45O75419 566 aa15.88■□□□□ 0.13
LRRTM1-205ENST00000417012 GNAI1P63096 354 aa15.88■□□□□ 0.13
LRRTM1-205ENST00000417012 GAS2L3Q86XJ1 694 aa15.88■□□□□ 0.13
LRRTM1-205ENST00000417012 MBIPQ9NS73 344 aa15.87■□□□□ 0.13
LRRTM1-205ENST00000417012 ABCC4O15439 1325 aa15.87■□□□□ 0.13
LRRTM1-205ENST00000417012 IFT57Q9NWB7 429 aa15.87■□□□□ 0.13
LRRTM1-205ENST00000417012 EIF4A2Q14240 407 aaKnown RBP15.86■□□□□ 0.13
LRRTM1-205ENST00000417012 CFAP44Q96MT7 982 aa15.86■□□□□ 0.13
LRRTM1-205ENST00000417012 RBM42Q9BTD8 480 aaKnown RBP15.86■□□□□ 0.13
LRRTM1-205ENST00000417012 SULT6B1Q6IMI4 303 aa15.86■□□□□ 0.13
LRRTM1-205ENST00000417012 ERBB4Q15303 1308 aa15.85■□□□□ 0.13
LRRTM1-205ENST00000417012 SSFA2P28290 1259 aa15.85■□□□□ 0.13
LRRTM1-205ENST00000417012 HSP90AB2PQ58FF8 381 aa15.85■□□□□ 0.13
LRRTM1-205ENST00000417012 SIRT2Q8IXJ6 389 aa15.85■□□□□ 0.13
LRRTM1-205ENST00000417012 GAS2L2Q8NHY3 880 aa15.85■□□□□ 0.13
LRRTM1-205ENST00000417012 API5Q9BZZ5 524 aaKnown RBP15.85■□□□□ 0.13
LRRTM1-205ENST00000417012 TWISTNBQ3B726 338 aaPredicted RBP15.84■□□□□ 0.13
LRRTM1-205ENST00000417012 USP6P35125 1406 aa15.83■□□□□ 0.12
LRRTM1-205ENST00000417012 PLEKHG3A1L390 1219 aa15.83■□□□□ 0.12
LRRTM1-205ENST00000417012 C8orf58Q8NAV2 365 aa15.83■□□□□ 0.12
LRRTM1-205ENST00000417012 ANP32BQ92688 251 aaKnown RBP15.83■□□□□ 0.12
LRRTM1-205ENST00000417012 RGPD8O14715 1765 aaPredicted RBP15.83■□□□□ 0.12
LRRTM1-205ENST00000417012 LMOD3Q0VAK6 560 aa15.83■□□□□ 0.12
LRRTM1-205ENST00000417012 RABEP1Q15276 862 aa15.83■□□□□ 0.12
LRRTM1-205ENST00000417012 CLEC17AQ6ZS10 378 aa15.83■□□□□ 0.12
LRRTM1-205ENST00000417012 TOPAZ1Q8N9V7 1692 aa15.82■□□□□ 0.12
LRRTM1-205ENST00000417012 ZNF853P0CG23 659 aa15.82■□□□□ 0.12
LRRTM1-205ENST00000417012 CCDC173Q0VFZ6 552 aa15.82■□□□□ 0.12
LRRTM1-205ENST00000417012 GLIPR1L2Q4G1C9 344 aa15.82■□□□□ 0.12
LRRTM1-205ENST00000417012 DDX49Q9Y6V7 483 aaKnown RBP15.82■□□□□ 0.12
LRRTM1-205ENST00000417012 NRKQ7Z2Y5 1582 aa15.82■□□□□ 0.12
LRRTM1-205ENST00000417012 KLHL40Q2TBA0 621 aa15.82■□□□□ 0.12
LRRTM1-205ENST00000417012 GSPT1P15170 499 aaKnown RBP15.81■□□□□ 0.12
LRRTM1-205ENST00000417012 TRHP20396 242 aaPredicted RBP15.81■□□□□ 0.12
LRRTM1-205ENST00000417012 NASPP49321 788 aaPredicted RBP15.81■□□□□ 0.12
LRRTM1-205ENST00000417012 IBTKQ9P2D0 1353 aaPredicted RBP15.81■□□□□ 0.12
LRRTM1-205ENST00000417012 FER1L4A9Z1Z3 1794 aa15.81■□□□□ 0.12
LRRTM1-205ENST00000417012 BAG4O95429 457 aaKnown RBP15.81■□□□□ 0.12
LRRTM1-205ENST00000417012 VSIG10Q8N0Z9 540 aa15.81■□□□□ 0.12
LRRTM1-205ENST00000417012 MCM10Q7L590 875 aa15.81■□□□□ 0.12
LRRTM1-205ENST00000417012 OVOS2A0A0J9YW53 1432 aa15.81■□□□□ 0.12
LRRTM1-205ENST00000417012 OVOS2Q6IE36 1432 aa15.81■□□□□ 0.12
LRRTM1-205ENST00000417012 KRT24Q2M2I5 525 aa15.8■□□□□ 0.12
LRRTM1-205ENST00000417012 PLEKHM2Q8IWE5 1019 aa15.8■□□□□ 0.12
LRRTM1-205ENST00000417012 PEAK1Q9H792 1746 aa15.8■□□□□ 0.12
LRRTM1-205ENST00000417012 KIF24Q5T7B8 1368 aa15.8■□□□□ 0.12
LRRTM1-205ENST00000417012 NGDNQ8NEJ9 315 aaKnown RBP15.8■□□□□ 0.12
LRRTM1-205ENST00000417012 NUCB2P80303 420 aa15.79■□□□□ 0.12
LRRTM1-205ENST00000417012 RRP9O43818 475 aaKnown RBP15.79■□□□□ 0.12
LRRTM1-205ENST00000417012 HSP90AA2PQ14568 343 aaPredicted RBP15.79■□□□□ 0.12
LRRTM1-205ENST00000417012 TTC22Q5TAA0 569 aa15.79■□□□□ 0.12
LRRTM1-205ENST00000417012 TBX22Q9Y458 520 aa15.79■□□□□ 0.12
LRRTM1-205ENST00000417012 NUTM2GQ5VZR2 741 aa15.78■□□□□ 0.12
LRRTM1-205ENST00000417012 THEMISQ8N1K5 641 aaPredicted RBP15.78■□□□□ 0.12
LRRTM1-205ENST00000417012 INTS3Q68E01 1043 aaKnown RBP15.78■□□□□ 0.12
LRRTM1-205ENST00000417012 DCTPP1Q9H773 170 aa15.78■□□□□ 0.12
LRRTM1-205ENST00000417012 SLIT1O75093 1534 aa15.78■□□□□ 0.12
LRRTM1-205ENST00000417012 PPP1R9BQ96SB3 815 aa15.78■□□□□ 0.12
LRRTM1-205ENST00000417012 RBM33Q96EV2 1170 aaKnown RBP15.77■□□□□ 0.12
LRRTM1-205ENST00000417012 MAP3K19Q56UN5 1328 aa15.77■□□□□ 0.11
LRRTM1-205ENST00000417012 ARHGAP23Q9P227 1491 aa15.77■□□□□ 0.11
LRRTM1-205ENST00000417012 KCNA6P17658 529 aa15.77■□□□□ 0.11
LRRTM1-205ENST00000417012 CASC1Q6TDU7 716 aa15.77■□□□□ 0.11
LRRTM1-205ENST00000417012 MCTP1Q6DN14 999 aa15.76■□□□□ 0.11
LRRTM1-205ENST00000417012 FOXO3O43524 673 aa15.76■□□□□ 0.11
LRRTM1-205ENST00000417012 SSH2Q76I76 1423 aa15.76■□□□□ 0.11
LRRTM1-205ENST00000417012 MIS18AQ9NYP9 233 aa15.76■□□□□ 0.11
LRRTM1-205ENST00000417012 USP26Q9BXU7 913 aa15.75■□□□□ 0.11
LRRTM1-205ENST00000417012 DIP2AQ14689 1571 aa15.75■□□□□ 0.11
LRRTM1-205ENST00000417012 ZSCAN30Q86W11 494 aa15.75■□□□□ 0.11
LRRTM1-205ENST00000417012 NALCNQ8IZF0 1738 aa15.74■□□□□ 0.11
LRRTM1-205ENST00000417012 ST18O60284 1047 aa15.74■□□□□ 0.11
LRRTM1-205ENST00000417012 TPM2P07951 284 aa15.74■□□□□ 0.11
LRRTM1-205ENST00000417012 NCLP19338 710 aaKnown RBP15.74■□□□□ 0.11
LRRTM1-205ENST00000417012 ZNF445P59923 1031 aa15.74■□□□□ 0.11
LRRTM1-205ENST00000417012 ANKRD44Q8N8A2 993 aa15.74■□□□□ 0.11
LRRTM1-205ENST00000417012 AK9Q5TCS8 1911 aa15.74■□□□□ 0.11
LRRTM1-205ENST00000417012 RIMS1Q86UR5 1692 aaKnown RBP15.74■□□□□ 0.11
LRRTM1-205ENST00000417012 USP31Q70CQ4 1352 aa15.74■□□□□ 0.11
LRRTM1-205ENST00000417012 HAP1P54257 671 aaPredicted RBP15.74■□□□□ 0.11
LRRTM1-205ENST00000417012 ZMYND15Q9H091 742 aa15.74■□□□□ 0.11
LRRTM1-205ENST00000417012 CWC22Q9HCG8 908 aaKnown RBP15.74■□□□□ 0.11
LRRTM1-205ENST00000417012 MSNP26038 577 aaKnown RBP15.73■□□□□ 0.11
LRRTM1-205ENST00000417012 CAVIN1Q6NZI2 390 aaKnown RBP15.73■□□□□ 0.11
LRRTM1-205ENST00000417012 RPAP2Q8IXW5 612 aaPredicted RBP15.73■□□□□ 0.11
LRRTM1-205ENST00000417012 ATP10DQ9P241 1426 aa15.73■□□□□ 0.11
LRRTM1-205ENST00000417012 CYP2E1P05181 493 aaPredicted RBP15.73■□□□□ 0.11
LRRTM1-205ENST00000417012 AMPHP49418 695 aa15.73■□□□□ 0.11
LRRTM1-205ENST00000417012 C16orf71Q8IYS4 520 aaPredicted RBP15.73■□□□□ 0.11
LRRTM1-205ENST00000417012 NLRP6P59044 892 aa15.72■□□□□ 0.11
LRRTM1-205ENST00000417012 A0A0U1RQG5 324 aaPredicted RBP15.72■□□□□ 0.11
LRRTM1-205ENST00000417012 REC8O95072 547 aa15.71■□□□□ 0.11
LRRTM1-205ENST00000417012 ZSCAN23Q3MJ62 389 aa15.71■□□□□ 0.11
LRRTM1-205ENST00000417012 LMBRD1Q9NUN5 540 aa15.71■□□□□ 0.11
LRRTM1-205ENST00000417012 TTC21AQ8NDW8 1320 aa15.71■□□□□ 0.11
LRRTM1-205ENST00000417012 SDSP20132 328 aa15.71■□□□□ 0.11
LRRTM1-205ENST00000417012 MTHFSDQ2M296 383 aaKnown RBP15.71■□□□□ 0.11
LRRTM1-205ENST00000417012 CEP85Q6P2H3 762 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms