RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 EVA1CP58658 441 aa14.75□□□□□ -0.05
LINC00330-201ENST00000414562 TOM1L2Q6ZVM7 507 aa14.75□□□□□ -0.05
LINC00330-201ENST00000414562 AFF2P51816 1311 aa14.75□□□□□ -0.05
LINC00330-201ENST00000414562 MAPK8IP3Q9UPT6 1336 aa14.75□□□□□ -0.05
LINC00330-201ENST00000414562 USP35Q9P2H5 1018 aa14.75□□□□□ -0.05
LINC00330-201ENST00000414562 DLG5Q8TDM6 1919 aa14.74□□□□□ -0.05
LINC00330-201ENST00000414562 CARD10Q9BWT7 1032 aa14.74□□□□□ -0.05
LINC00330-201ENST00000414562 ERICH6BQ5W0A0 696 aa14.73□□□□□ -0.05
LINC00330-201ENST00000414562 UNC5CLQ8IV45 518 aa14.73□□□□□ -0.05
LINC00330-201ENST00000414562 CRB1P82279 1406 aa14.73□□□□□ -0.05
LINC00330-201ENST00000414562 NEFMP07197 916 aa14.73□□□□□ -0.05
LINC00330-201ENST00000414562 SLFN5Q08AF3 891 aa14.73□□□□□ -0.05
LINC00330-201ENST00000414562 MTHFSDQ2M296 383 aaKnown RBP14.73□□□□□ -0.05
LINC00330-201ENST00000414562 WWC1Q8IX03 1113 aa14.73□□□□□ -0.05
LINC00330-201ENST00000414562 ARXQ96QS3 562 aa14.73□□□□□ -0.05
LINC00330-201ENST00000414562 E9PSI1 815 aa14.72□□□□□ -0.05
LINC00330-201ENST00000414562 MEX3CQ5U5Q3 659 aaKnown RBP14.72□□□□□ -0.05
LINC00330-201ENST00000414562 USP21Q9UK80 565 aa14.72□□□□□ -0.05
LINC00330-201ENST00000414562 SPATA31A1Q5TZJ5 1347 aa14.72□□□□□ -0.05
LINC00330-201ENST00000414562 SPATA31A5Q5VU36 1347 aa14.72□□□□□ -0.05
LINC00330-201ENST00000414562 RNF123Q5XPI4 1314 aa14.72□□□□□ -0.05
LINC00330-201ENST00000414562 SPATA31A7Q8IWB4 1347 aa14.72□□□□□ -0.05
LINC00330-201ENST00000414562 DUSP27Q5VZP5 1158 aa14.71□□□□□ -0.05
LINC00330-201ENST00000414562 RGS17Q9UGC6 210 aaPredicted RBP14.71□□□□□ -0.05
LINC00330-201ENST00000414562 TMPOP42166 694 aaKnown RBP14.71□□□□□ -0.05
LINC00330-201ENST00000414562 TRIM35Q9UPQ4 493 aa14.71□□□□□ -0.05
LINC00330-201ENST00000414562 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.71□□□□□ -0.06
LINC00330-201ENST00000414562 DISP2A7MBM2 1401 aa14.7□□□□□ -0.06
LINC00330-201ENST00000414562 SHANK3Q9BYB0 1731 aa14.7□□□□□ -0.06
LINC00330-201ENST00000414562 CCDC27Q2M243 656 aa14.7□□□□□ -0.06
LINC00330-201ENST00000414562 GLI3P10071 1580 aa14.69□□□□□ -0.06
LINC00330-201ENST00000414562 RRP1P56182 461 aaKnown RBP14.69□□□□□ -0.06
LINC00330-201ENST00000414562 VPS72Q15906 364 aa14.69□□□□□ -0.06
LINC00330-201ENST00000414562 WNK3Q9BYP7 1800 aa14.69□□□□□ -0.06
LINC00330-201ENST00000414562 WDR63Q8IWG1 891 aa14.68□□□□□ -0.06
LINC00330-201ENST00000414562 DCTN1Q14203 1278 aa14.68□□□□□ -0.06
LINC00330-201ENST00000414562 NFE2L2Q16236 605 aa14.68□□□□□ -0.06
LINC00330-201ENST00000414562 TRMT2AQ8IZ69 625 aaKnown RBP14.68□□□□□ -0.06
LINC00330-201ENST00000414562 THUMPD2Q9BTF0 503 aaKnown RBP14.68□□□□□ -0.06
LINC00330-201ENST00000414562 SPINK5Q9NQ38 1064 aaPredicted RBP14.68□□□□□ -0.06
LINC00330-201ENST00000414562 ATRNO75882 1429 aa14.68□□□□□ -0.06
LINC00330-201ENST00000414562 PKD1L3Q7Z443 1732 aa14.67□□□□□ -0.06
LINC00330-201ENST00000414562 PPP4R2Q9NY27 417 aa14.67□□□□□ -0.06
LINC00330-201ENST00000414562 OVOS2A0A0G2JMS6 1433 aa14.67□□□□□ -0.06
LINC00330-201ENST00000414562 CYP27B1O15528 508 aa14.66□□□□□ -0.06
LINC00330-201ENST00000414562 RIPK4P57078 832 aa14.66□□□□□ -0.06
LINC00330-201ENST00000414562 IL2RBP14784 551 aa14.66□□□□□ -0.06
LINC00330-201ENST00000414562 CCDC9Q9Y3X0 531 aaKnown RBP14.66□□□□□ -0.06
LINC00330-201ENST00000414562 FAM98CQ17RN3 349 aaKnown RBP14.65□□□□□ -0.06
LINC00330-201ENST00000414562 RAPGEF4Q8WZA2 1011 aa14.65□□□□□ -0.06
LINC00330-201ENST00000414562 QTRT2Q9H974 415 aaKnown RBP14.65□□□□□ -0.06
LINC00330-201ENST00000414562 PARP4Q9UKK3 1724 aaKnown RBP14.65□□□□□ -0.06
LINC00330-201ENST00000414562 TATP17735 454 aaPredicted RBP14.65□□□□□ -0.06
LINC00330-201ENST00000414562 VIRMAQ69YN4 1812 aaKnown RBP14.64□□□□□ -0.07
LINC00330-201ENST00000414562 MCM10Q7L590 875 aa14.64□□□□□ -0.07
LINC00330-201ENST00000414562 IL17REQ8NFR9 667 aa14.64□□□□□ -0.07
LINC00330-201ENST00000414562 GJD4Q96KN9 370 aaPredicted RBP14.64□□□□□ -0.07
LINC00330-201ENST00000414562 LGR6Q9HBX8 967 aa14.64□□□□□ -0.07
LINC00330-201ENST00000414562 ANP32EQ9BTT0 268 aa14.63□□□□□ -0.07
LINC00330-201ENST00000414562 MYH16Q9H6N6 1097 aa14.63□□□□□ -0.07
LINC00330-201ENST00000414562 ZNF530Q6P9A1 599 aaPredicted RBP14.63□□□□□ -0.07
LINC00330-201ENST00000414562 POTEAQ6S8J7 498 aa14.63□□□□□ -0.07
LINC00330-201ENST00000414562 BARGINQ6ZT62 677 aa14.63□□□□□ -0.07
LINC00330-201ENST00000414562 PLEKHO1Q53GL0 409 aaPredicted RBP14.62□□□□□ -0.07
LINC00330-201ENST00000414562 ZCRB1Q8TBF4 217 aaKnown RBP14.62□□□□□ -0.07
LINC00330-201ENST00000414562 EP400Q96L91 3159 aa14.62□□□□□ -0.07
LINC00330-201ENST00000414562 LRRC37A3O60309 1634 aa14.62□□□□□ -0.07
LINC00330-201ENST00000414562 PHKG2P15735 406 aa14.61□□□□□ -0.07
LINC00330-201ENST00000414562 MPRIPQ6WCQ1 1025 aa14.61□□□□□ -0.07
LINC00330-201ENST00000414562 TRPC5Q9UL62 973 aaPredicted RBP14.61□□□□□ -0.07
LINC00330-201ENST00000414562 KDM6AO15550 1401 aaPredicted RBP14.61□□□□□ -0.07
LINC00330-201ENST00000414562 THSD7AQ9UPZ6 1657 aa14.61□□□□□ -0.07
LINC00330-201ENST00000414562 PLIN1O60240 522 aa14.61□□□□□ -0.07
LINC00330-201ENST00000414562 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.61□□□□□ -0.07
LINC00330-201ENST00000414562 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.61□□□□□ -0.07
LINC00330-201ENST00000414562 PODXL2Q9NZ53 605 aa14.61□□□□□ -0.07
LINC00330-201ENST00000414562 THRAP3Q9Y2W1 955 aaKnown RBP14.61□□□□□ -0.07
LINC00330-201ENST00000414562 AMOTQ4VCS5 1084 aa14.6□□□□□ -0.07
LINC00330-201ENST00000414562 GAS2L2Q8NHY3 880 aa14.6□□□□□ -0.07
LINC00330-201ENST00000414562 DDX54Q8TDD1 881 aaKnown RBP14.6□□□□□ -0.07
LINC00330-201ENST00000414562 ADAMTS7Q9UKP4 1686 aa14.6□□□□□ -0.07
LINC00330-201ENST00000414562 MAP3K5Q99683 1374 aa14.6□□□□□ -0.07
LINC00330-201ENST00000414562 ONECUT3O60422 494 aaPredicted RBP14.59□□□□□ -0.07
LINC00330-201ENST00000414562 MARCH10Q8NA82 808 aaPredicted RBP14.59□□□□□ -0.07
LINC00330-201ENST00000414562 TOGARAM1Q9Y4F4 1720 aa14.59□□□□□ -0.07
LINC00330-201ENST00000414562 GNAT3A8MTJ3 354 aa14.59□□□□□ -0.07
LINC00330-201ENST00000414562 IL16Q14005 1332 aa14.58□□□□□ -0.07
LINC00330-201ENST00000414562 AKAP4Q5JQC9 854 aa14.58□□□□□ -0.08
LINC00330-201ENST00000414562 FAM182BQ5T319 152 aa14.58□□□□□ -0.08
LINC00330-201ENST00000414562 SPG7Q9UQ90 795 aa14.58□□□□□ -0.08
LINC00330-201ENST00000414562 BRWD3Q6RI45 1802 aa14.58□□□□□ -0.08
LINC00330-201ENST00000414562 SCN11AQ9UI33 1791 aa14.58□□□□□ -0.08
LINC00330-201ENST00000414562 LMOD3Q0VAK6 560 aa14.58□□□□□ -0.08
LINC00330-201ENST00000414562 B4GALNT3Q6L9W6 998 aa14.58□□□□□ -0.08
LINC00330-201ENST00000414562 MIS18AQ9NYP9 233 aa14.58□□□□□ -0.08
LINC00330-201ENST00000414562 TNS2Q63HR2 1409 aa14.57□□□□□ -0.08
LINC00330-201ENST00000414562 CEMIPQ8WUJ3 1361 aa14.57□□□□□ -0.08
LINC00330-201ENST00000414562 RNMTO43148 476 aaKnown RBP14.57□□□□□ -0.08
LINC00330-201ENST00000414562 CALD1Q05682 793 aaKnown RBP14.57□□□□□ -0.08
LINC00330-201ENST00000414562 EXOC5O00471 708 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms