RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 RGS12O14924 1447 aa23.54■■□□□ 1.36
TNFRSF8-202ENST00000413146 HDGFP51858 240 aaKnown RBP23.54■■□□□ 1.36
TNFRSF8-202ENST00000413146 RPAP2Q8IXW5 612 aaPredicted RBP23.53■■□□□ 1.36
TNFRSF8-202ENST00000413146 GAS2L2Q8NHY3 880 aa23.53■■□□□ 1.36
TNFRSF8-202ENST00000413146 KIAA0232Q92628 1395 aa23.52■■□□□ 1.36
TNFRSF8-202ENST00000413146 CHL1O00533 1208 aa23.52■■□□□ 1.36
TNFRSF8-202ENST00000413146 RABEP1Q15276 862 aa23.52■■□□□ 1.36
TNFRSF8-202ENST00000413146 KRT24Q2M2I5 525 aa23.52■■□□□ 1.36
TNFRSF8-202ENST00000413146 MSH6P52701 1360 aa23.52■■□□□ 1.36
TNFRSF8-202ENST00000413146 PTPRCP08575 1304 aa23.51■■□□□ 1.35
TNFRSF8-202ENST00000413146 ESF1Q9H501 851 aaKnown RBP23.51■■□□□ 1.35
TNFRSF8-202ENST00000413146 CEP85Q6P2H3 762 aa23.5■■□□□ 1.35
TNFRSF8-202ENST00000413146 MCM10Q7L590 875 aa23.5■■□□□ 1.35
TNFRSF8-202ENST00000413146 GOLGA6L22H0YM25 854 aa23.5■■□□□ 1.35
TNFRSF8-202ENST00000413146 C16orf71Q8IYS4 520 aaPredicted RBP23.5■■□□□ 1.35
TNFRSF8-202ENST00000413146 TTC21BQ7Z4L5 1316 aa23.49■■□□□ 1.35
TNFRSF8-202ENST00000413146 SSFA2P28290 1259 aa23.49■■□□□ 1.35
TNFRSF8-202ENST00000413146 RTL1A6NKG5 1358 aa23.49■■□□□ 1.35
TNFRSF8-202ENST00000413146 OVOS2A0A0J9YW53 1432 aa23.48■■□□□ 1.35
TNFRSF8-202ENST00000413146 OVOS2Q6IE36 1432 aa23.48■■□□□ 1.35
TNFRSF8-202ENST00000413146 CASC1Q6TDU7 716 aa23.48■■□□□ 1.35
TNFRSF8-202ENST00000413146 TOPAZ1Q8N9V7 1692 aa23.47■■□□□ 1.35
TNFRSF8-202ENST00000413146 RGPD1P0DJD0 1748 aa23.47■■□□□ 1.35
TNFRSF8-202ENST00000413146 NALCNQ8IZF0 1738 aa23.47■■□□□ 1.35
TNFRSF8-202ENST00000413146 PEAK1Q9H792 1746 aa23.46■■□□□ 1.35
TNFRSF8-202ENST00000413146 ROBO2Q9HCK4 1378 aa23.46■■□□□ 1.35
TNFRSF8-202ENST00000413146 USP26Q9BXU7 913 aa23.46■■□□□ 1.35
TNFRSF8-202ENST00000413146 OTUD7AQ8TE49 926 aaPredicted RBP23.45■■□□□ 1.35
TNFRSF8-202ENST00000413146 ACEP12821 1306 aa23.45■■□□□ 1.34
TNFRSF8-202ENST00000413146 CLEC17AQ6ZS10 378 aa23.45■■□□□ 1.34
TNFRSF8-202ENST00000413146 MEIS3Q99687 375 aa23.45■■□□□ 1.34
TNFRSF8-202ENST00000413146 APBB1O00213 710 aa23.44■■□□□ 1.34
TNFRSF8-202ENST00000413146 AK9Q5TCS8 1911 aa23.44■■□□□ 1.34
TNFRSF8-202ENST00000413146 SDSP20132 328 aa23.44■■□□□ 1.34
TNFRSF8-202ENST00000413146 CLCN1P35523 988 aa23.44■■□□□ 1.34
TNFRSF8-202ENST00000413146 SMARCA5O60264 1052 aaPredicted RBP23.43■■□□□ 1.34
TNFRSF8-202ENST00000413146 HSP90AB2PQ58FF8 381 aa23.43■■□□□ 1.34
TNFRSF8-202ENST00000413146 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.43■■□□□ 1.34
TNFRSF8-202ENST00000413146 USP6P35125 1406 aa23.43■■□□□ 1.34
TNFRSF8-202ENST00000413146 GAS2L3Q86XJ1 694 aa23.43■■□□□ 1.34
TNFRSF8-202ENST00000413146 CRB1P82279 1406 aa23.43■■□□□ 1.34
TNFRSF8-202ENST00000413146 TNRQ92752 1358 aa23.42■■□□□ 1.34
TNFRSF8-202ENST00000413146 HMMRO75330 724 aa23.42■■□□□ 1.34
TNFRSF8-202ENST00000413146 BAG4O95429 457 aaKnown RBP23.42■■□□□ 1.34
TNFRSF8-202ENST00000413146 SLC4A2P04920 1241 aa23.42■■□□□ 1.34
TNFRSF8-202ENST00000413146 TMEM2Q9UHN6 1383 aa23.42■■□□□ 1.34
TNFRSF8-202ENST00000413146 UBR1Q8IWV7 1749 aa23.42■■□□□ 1.34
TNFRSF8-202ENST00000413146 FMN2Q9NZ56 1722 aa23.41■■□□□ 1.34
TNFRSF8-202ENST00000413146 NUCB2P80303 420 aa23.41■■□□□ 1.34
TNFRSF8-202ENST00000413146 PLEKHG3A1L390 1219 aa23.4■■□□□ 1.34
TNFRSF8-202ENST00000413146 ARHGEF10O15013 1369 aa23.4■■□□□ 1.34
TNFRSF8-202ENST00000413146 REC8O95072 547 aa23.4■■□□□ 1.34
TNFRSF8-202ENST00000413146 USP31Q70CQ4 1352 aa23.39■■□□□ 1.34
TNFRSF8-202ENST00000413146 NUTM2FA1L443 756 aa23.39■■□□□ 1.33
TNFRSF8-202ENST00000413146 ST18O60284 1047 aa23.39■■□□□ 1.33
TNFRSF8-202ENST00000413146 KLHL40Q2TBA0 621 aa23.39■■□□□ 1.33
TNFRSF8-202ENST00000413146 DDX49Q9Y6V7 483 aaKnown RBP23.39■■□□□ 1.33
TNFRSF8-202ENST00000413146 SOX12O15370 315 aa23.38■■□□□ 1.33
TNFRSF8-202ENST00000413146 TRIM44Q96DX7 344 aaPredicted RBP23.38■■□□□ 1.33
TNFRSF8-202ENST00000413146 ADAMTS13Q76LX8 1427 aa23.38■■□□□ 1.33
TNFRSF8-202ENST00000413146 RTF1Q92541 710 aaKnown RBP23.38■■□□□ 1.33
TNFRSF8-202ENST00000413146 TSPYL4Q9UJ04 414 aa23.37■■□□□ 1.33
TNFRSF8-202ENST00000413146 CCT4P50991 539 aaKnown RBP23.37■■□□□ 1.33
TNFRSF8-202ENST00000413146 SLC4A10Q6U841 1118 aa23.37■■□□□ 1.33
TNFRSF8-202ENST00000413146 RIMS1Q86UR5 1692 aaKnown RBP23.37■■□□□ 1.33
TNFRSF8-202ENST00000413146 MIS18AQ9NYP9 233 aa23.36■■□□□ 1.33
TNFRSF8-202ENST00000413146 IBTKQ9P2D0 1353 aaPredicted RBP23.36■■□□□ 1.33
TNFRSF8-202ENST00000413146 MAP3K19Q56UN5 1328 aa23.36■■□□□ 1.33
TNFRSF8-202ENST00000413146 CWC22Q9HCG8 908 aaKnown RBP23.36■■□□□ 1.33
TNFRSF8-202ENST00000413146 ESPNB1AK53 854 aa23.35■■□□□ 1.33
TNFRSF8-202ENST00000413146 ERC2O15083 957 aa23.35■■□□□ 1.33
TNFRSF8-202ENST00000413146 FOXO3O43524 673 aa23.34■■□□□ 1.33
TNFRSF8-202ENST00000413146 MTHFSDQ2M296 383 aaKnown RBP23.34■■□□□ 1.33
TNFRSF8-202ENST00000413146 MCTP1Q6DN14 999 aa23.34■■□□□ 1.33
TNFRSF8-202ENST00000413146 F6X3S4 739 aa23.33■■□□□ 1.33
TNFRSF8-202ENST00000413146 CYP2E1P05181 493 aaPredicted RBP23.33■■□□□ 1.33
TNFRSF8-202ENST00000413146 G2E3Q7L622 706 aa23.33■■□□□ 1.33
TNFRSF8-202ENST00000413146 OSBPL3Q9H4L5 887 aa23.33■■□□□ 1.33
TNFRSF8-202ENST00000413146 FLT4P35916 1363 aa23.32■■□□□ 1.32
TNFRSF8-202ENST00000413146 PDE1AP54750 535 aa23.32■■□□□ 1.32
TNFRSF8-202ENST00000413146 NAP1L5Q96NT1 182 aaPredicted RBP23.32■■□□□ 1.32
TNFRSF8-202ENST00000413146 TTC21AQ8NDW8 1320 aa23.31■■□□□ 1.32
TNFRSF8-202ENST00000413146 SBNO1A3KN83 1393 aa23.31■■□□□ 1.32
TNFRSF8-202ENST00000413146 PLEKHG1Q9ULL1 1385 aa23.31■■□□□ 1.32
TNFRSF8-202ENST00000413146 SSH2Q76I76 1423 aa23.31■■□□□ 1.32
TNFRSF8-202ENST00000413146 STK31Q9BXU1 1019 aa23.31■■□□□ 1.32
TNFRSF8-202ENST00000413146 GNAI2P04899 355 aa23.3■■□□□ 1.32
TNFRSF8-202ENST00000413146 NASPP49321 788 aaPredicted RBP23.3■■□□□ 1.32
TNFRSF8-202ENST00000413146 KDRP35968 1356 aa23.3■■□□□ 1.32
TNFRSF8-202ENST00000413146 CCDC173Q0VFZ6 552 aa23.29■■□□□ 1.32
TNFRSF8-202ENST00000413146 ANP32BQ92688 251 aaKnown RBP23.29■■□□□ 1.32
TNFRSF8-202ENST00000413146 ERBB4Q15303 1308 aa23.29■■□□□ 1.32
TNFRSF8-202ENST00000413146 PKP1Q13835 747 aa23.29■■□□□ 1.32
TNFRSF8-202ENST00000413146 ZGPATQ8N5A5 531 aaKnown RBP23.28■■□□□ 1.32
TNFRSF8-202ENST00000413146 FAM208AQ9UK61 1670 aaKnown RBP23.28■■□□□ 1.32
TNFRSF8-202ENST00000413146 NCLP19338 710 aaKnown RBP23.27■■□□□ 1.32
TNFRSF8-202ENST00000413146 LMBRD1Q9NUN5 540 aa23.27■■□□□ 1.32
TNFRSF8-202ENST00000413146 EXOC6BQ9Y2D4 811 aa23.27■■□□□ 1.32
TNFRSF8-202ENST00000413146 AMPHP49418 695 aa23.27■■□□□ 1.32
TNFRSF8-202ENST00000413146 CEP170BQ9Y4F5 1589 aaPredicted RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms