RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 TOPAZ1Q8N9V7 1692 aa20.68■□□□□ 0.9
LIMS2-208ENST00000410011 CEP85Q6P2H3 762 aa20.67■□□□□ 0.9
LIMS2-208ENST00000410011 NALCNQ8IZF0 1738 aa20.67■□□□□ 0.9
LIMS2-208ENST00000410011 ROBO2Q9HCK4 1378 aa20.67■□□□□ 0.9
LIMS2-208ENST00000410011 RTL1A6NKG5 1358 aa20.66■□□□□ 0.9
LIMS2-208ENST00000410011 TSPOAP1O95153 1857 aa20.66■□□□□ 0.9
LIMS2-208ENST00000410011 HSP90AA1P07900 732 aaKnown RBP20.66■□□□□ 0.9
LIMS2-208ENST00000410011 AEBP1Q8IUX7 1158 aa20.66■□□□□ 0.9
LIMS2-208ENST00000410011 GRPEL1Q9HAV7 217 aa20.66■□□□□ 0.9
LIMS2-208ENST00000410011 CRB1P82279 1406 aa20.66■□□□□ 0.9
LIMS2-208ENST00000410011 USP26Q9BXU7 913 aa20.65■□□□□ 0.9
LIMS2-208ENST00000410011 USP6P35125 1406 aa20.65■□□□□ 0.9
LIMS2-208ENST00000410011 ADAMTS13Q76LX8 1427 aa20.65■□□□□ 0.9
LIMS2-208ENST00000410011 TNRQ92752 1358 aa20.65■□□□□ 0.9
LIMS2-208ENST00000410011 ESF1Q9H501 851 aaKnown RBP20.65■□□□□ 0.9
LIMS2-208ENST00000410011 RRAGDQ9NQL2 400 aaPredicted RBP20.65■□□□□ 0.9
LIMS2-208ENST00000410011 ACEP12821 1306 aa20.64■□□□□ 0.9
LIMS2-208ENST00000410011 SSH2Q76I76 1423 aa20.64■□□□□ 0.9
LIMS2-208ENST00000410011 MLECQ14165 292 aa20.64■□□□□ 0.89
LIMS2-208ENST00000410011 ARHGEF10O15013 1369 aa20.64■□□□□ 0.89
LIMS2-208ENST00000410011 RBM42Q9BTD8 480 aaKnown RBP20.63■□□□□ 0.89
LIMS2-208ENST00000410011 GAS2L2Q8NHY3 880 aa20.62■□□□□ 0.89
LIMS2-208ENST00000410011 PANK2Q9BZ23 570 aa20.62■□□□□ 0.89
LIMS2-208ENST00000410011 UBR1Q8IWV7 1749 aa20.62■□□□□ 0.89
LIMS2-208ENST00000410011 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.62■□□□□ 0.89
LIMS2-208ENST00000410011 CASC1Q6TDU7 716 aa20.61■□□□□ 0.89
LIMS2-208ENST00000410011 OSBPL3Q9H4L5 887 aa20.61■□□□□ 0.89
LIMS2-208ENST00000410011 PEAK1Q9H792 1746 aa20.61■□□□□ 0.89
LIMS2-208ENST00000410011 IBTKQ9P2D0 1353 aaPredicted RBP20.61■□□□□ 0.89
LIMS2-208ENST00000410011 PLEKHG1Q9ULL1 1385 aa20.61■□□□□ 0.89
LIMS2-208ENST00000410011 GOLGA6L22H0YM25 854 aa20.61■□□□□ 0.89
LIMS2-208ENST00000410011 TTC21AQ8NDW8 1320 aa20.61■□□□□ 0.89
LIMS2-208ENST00000410011 HMMRO75330 724 aa20.6■□□□□ 0.89
LIMS2-208ENST00000410011 MCM10Q7L590 875 aa20.6■□□□□ 0.89
LIMS2-208ENST00000410011 MSH6P52701 1360 aa20.6■□□□□ 0.89
LIMS2-208ENST00000410011 CLCN1P35523 988 aa20.6■□□□□ 0.89
LIMS2-208ENST00000410011 C16orf71Q8IYS4 520 aaPredicted RBP20.6■□□□□ 0.89
LIMS2-208ENST00000410011 KDRP35968 1356 aa20.59■□□□□ 0.89
LIMS2-208ENST00000410011 NUCB2P80303 420 aa20.59■□□□□ 0.89
LIMS2-208ENST00000410011 KRT24Q2M2I5 525 aa20.59■□□□□ 0.89
LIMS2-208ENST00000410011 HSP90AB2PQ58FF8 381 aa20.59■□□□□ 0.89
LIMS2-208ENST00000410011 CWC22Q9HCG8 908 aaKnown RBP20.59■□□□□ 0.89
LIMS2-208ENST00000410011 SDSP20132 328 aa20.59■□□□□ 0.89
LIMS2-208ENST00000410011 CCT4P50991 539 aaKnown RBP20.59■□□□□ 0.89
LIMS2-208ENST00000410011 SLC4A2P04920 1241 aa20.58■□□□□ 0.88
LIMS2-208ENST00000410011 MEIS3Q99687 375 aa20.58■□□□□ 0.88
LIMS2-208ENST00000410011 HTATSF1O43719 755 aaKnown RBP20.57■□□□□ 0.88
LIMS2-208ENST00000410011 REC8O95072 547 aa20.57■□□□□ 0.88
LIMS2-208ENST00000410011 KLHL40Q2TBA0 621 aa20.57■□□□□ 0.88
LIMS2-208ENST00000410011 CYP2E1P05181 493 aaPredicted RBP20.56■□□□□ 0.88
LIMS2-208ENST00000410011 SSFA2P28290 1259 aa20.56■□□□□ 0.88
LIMS2-208ENST00000410011 SBNO1A3KN83 1393 aa20.55■□□□□ 0.88
LIMS2-208ENST00000410011 BAG4O95429 457 aaKnown RBP20.55■□□□□ 0.88
LIMS2-208ENST00000410011 FLT4P35916 1363 aa20.55■□□□□ 0.88
LIMS2-208ENST00000410011 SOS1Q07889 1333 aaPredicted RBP20.55■□□□□ 0.88
LIMS2-208ENST00000410011 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.55■□□□□ 0.88
LIMS2-208ENST00000410011 GAS2L3Q86XJ1 694 aa20.54■□□□□ 0.88
LIMS2-208ENST00000410011 OTUD7AQ8TE49 926 aaPredicted RBP20.54■□□□□ 0.88
LIMS2-208ENST00000410011 MAP3K19Q56UN5 1328 aa20.54■□□□□ 0.88
LIMS2-208ENST00000410011 ST18O60284 1047 aa20.54■□□□□ 0.88
LIMS2-208ENST00000410011 RTF1Q92541 710 aaKnown RBP20.54■□□□□ 0.88
LIMS2-208ENST00000410011 PTPRUQ92729 1446 aa20.53■□□□□ 0.88
LIMS2-208ENST00000410011 FOXD4L1Q9NU39 408 aa20.53■□□□□ 0.88
LIMS2-208ENST00000410011 MTHFSDQ2M296 383 aaKnown RBP20.53■□□□□ 0.88
LIMS2-208ENST00000410011 ARXQ96QS3 562 aa20.53■□□□□ 0.88
LIMS2-208ENST00000410011 IGSF1Q8N6C5 1336 aa20.52■□□□□ 0.88
LIMS2-208ENST00000410011 ERC2O15083 957 aa20.52■□□□□ 0.88
LIMS2-208ENST00000410011 TSPYL4Q9UJ04 414 aa20.52■□□□□ 0.87
LIMS2-208ENST00000410011 FMN2Q9NZ56 1722 aa20.51■□□□□ 0.87
LIMS2-208ENST00000410011 SMARCA5O60264 1052 aaPredicted RBP20.5■□□□□ 0.87
LIMS2-208ENST00000410011 PDE1AP54750 535 aa20.5■□□□□ 0.87
LIMS2-208ENST00000410011 BABAM1Q9NWV8 329 aa20.5■□□□□ 0.87
LIMS2-208ENST00000410011 GNAI2P04899 355 aa20.5■□□□□ 0.87
LIMS2-208ENST00000410011 LTKP29376 864 aa20.5■□□□□ 0.87
LIMS2-208ENST00000410011 SALL3Q9BXA9 1300 aa20.5■□□□□ 0.87
LIMS2-208ENST00000410011 G2E3Q7L622 706 aa20.48■□□□□ 0.87
LIMS2-208ENST00000410011 GNAI3P08754 354 aa20.48■□□□□ 0.87
LIMS2-208ENST00000410011 ZNF445P59923 1031 aa20.48■□□□□ 0.87
LIMS2-208ENST00000410011 DDX49Q9Y6V7 483 aaKnown RBP20.48■□□□□ 0.87
LIMS2-208ENST00000410011 LRRC37A3O60309 1634 aa20.47■□□□□ 0.87
LIMS2-208ENST00000410011 ESPNB1AK53 854 aa20.47■□□□□ 0.87
LIMS2-208ENST00000410011 IL17RAQ96F46 866 aa20.47■□□□□ 0.87
LIMS2-208ENST00000410011 STK31Q9BXU1 1019 aa20.47■□□□□ 0.87
LIMS2-208ENST00000410011 TBX22Q9Y458 520 aa20.47■□□□□ 0.87
LIMS2-208ENST00000410011 MCM2P49736 904 aa20.47■□□□□ 0.87
LIMS2-208ENST00000410011 PPP1R9BQ96SB3 815 aa20.47■□□□□ 0.87
LIMS2-208ENST00000410011 EYA1Q99502 592 aa20.47■□□□□ 0.87
LIMS2-208ENST00000410011 FOXO3O43524 673 aa20.46■□□□□ 0.87
LIMS2-208ENST00000410011 CCDC30Q5VVM6 783 aa20.46■□□□□ 0.87
LIMS2-208ENST00000410011 EPB41L2O43491 1005 aaKnown RBP20.45■□□□□ 0.87
LIMS2-208ENST00000410011 LMBRD1Q9NUN5 540 aa20.45■□□□□ 0.87
LIMS2-208ENST00000410011 MIS18AQ9NYP9 233 aa20.45■□□□□ 0.87
LIMS2-208ENST00000410011 CACNA1FO60840 1977 aa20.45■□□□□ 0.86
LIMS2-208ENST00000410011 ATP8B2P98198 1209 aa20.45■□□□□ 0.86
LIMS2-208ENST00000410011 CCDC173Q0VFZ6 552 aa20.45■□□□□ 0.86
LIMS2-208ENST00000410011 SLIT1O75093 1534 aa20.45■□□□□ 0.86
LIMS2-208ENST00000410011 ARHGAP23Q9P227 1491 aa20.44■□□□□ 0.86
LIMS2-208ENST00000410011 F6X3S4 739 aa20.44■□□□□ 0.86
LIMS2-208ENST00000410011 ANAPC15P60006 121 aa20.44■□□□□ 0.86
LIMS2-208ENST00000410011 SLC4A10Q6U841 1118 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms