RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 BCL11BQ9C0K0 894 aaPredicted RBP14.08□□□□□ -0.16
SNX13-202ENST00000409604 STARD3NLO95772 234 aa14.08□□□□□ -0.16
SNX13-202ENST00000409604 PDE4AP27815 886 aa14.08□□□□□ -0.16
SNX13-202ENST00000409604 GPATCH3Q96I76 525 aa14.08□□□□□ -0.16
SNX13-202ENST00000409604 RAD21O60216 631 aa14.08□□□□□ -0.16
SNX13-202ENST00000409604 CCDC24Q8N4L8 307 aa14.08□□□□□ -0.16
SNX13-202ENST00000409604 DNAJC2Q99543 621 aaKnown RBP14.07□□□□□ -0.16
SNX13-202ENST00000409604 RSPH6AQ9H0K4 717 aa14.07□□□□□ -0.16
SNX13-202ENST00000409604 IFT57Q9NWB7 429 aa14.07□□□□□ -0.16
SNX13-202ENST00000409604 PDZRN3Q9UPQ7 1066 aa14.07□□□□□ -0.16
SNX13-202ENST00000409604 KDM4FA0A1W2PPD8 638 aa14.07□□□□□ -0.16
SNX13-202ENST00000409604 FLIIQ13045 1269 aa14.07□□□□□ -0.16
SNX13-202ENST00000409604 BRINP3Q76B58 766 aa14.07□□□□□ -0.16
SNX13-202ENST00000409604 KCNQ3O43525 872 aa14.06□□□□□ -0.16
SNX13-202ENST00000409604 GNAI2P04899 355 aa14.06□□□□□ -0.16
SNX13-202ENST00000409604 CNNM1Q9NRU3 951 aa14.06□□□□□ -0.16
SNX13-202ENST00000409604 TRPM2O94759 1503 aa14.06□□□□□ -0.16
SNX13-202ENST00000409604 PIK3C2GO75747 1445 aa14.06□□□□□ -0.16
SNX13-202ENST00000409604 NINLQ9Y2I6 1382 aa14.06□□□□□ -0.16
SNX13-202ENST00000409604 PRIM1P49642 420 aaKnown RBP14.06□□□□□ -0.16
SNX13-202ENST00000409604 MVPQ14764 893 aaKnown RBP14.06□□□□□ -0.16
SNX13-202ENST00000409604 FMNL2Q96PY5 1086 aa14.06□□□□□ -0.16
SNX13-202ENST00000409604 KIAA0232Q92628 1395 aa14.06□□□□□ -0.16
SNX13-202ENST00000409604 COPS6Q7L5N1 327 aa14.05□□□□□ -0.16
SNX13-202ENST00000409604 GNAI3P08754 354 aa14.05□□□□□ -0.16
SNX13-202ENST00000409604 ANO2Q9NQ90 1003 aa14.05□□□□□ -0.16
SNX13-202ENST00000409604 NSD2O96028 1365 aa14.05□□□□□ -0.16
SNX13-202ENST00000409604 DIP2BQ9P265 1576 aa14.05□□□□□ -0.16
SNX13-202ENST00000409604 NLRP1Q9C000 1473 aa14.05□□□□□ -0.16
SNX13-202ENST00000409604 ATP6V1AP38606 617 aa14.05□□□□□ -0.16
SNX13-202ENST00000409604 TSHZ3Q63HK5 1081 aa14.05□□□□□ -0.16
SNX13-202ENST00000409604 SAMD1Q6SPF0 538 aaPredicted RBP14.05□□□□□ -0.16
SNX13-202ENST00000409604 PHAXQ9H814 394 aaKnown RBP14.05□□□□□ -0.16
SNX13-202ENST00000409604 USP21Q9UK80 565 aa14.05□□□□□ -0.16
SNX13-202ENST00000409604 MAP3K2Q9Y2U5 619 aa14.05□□□□□ -0.16
SNX13-202ENST00000409604 CLTCL1P53675 1640 aa14.04□□□□□ -0.16
SNX13-202ENST00000409604 UBE3BQ7Z3V4 1068 aa14.04□□□□□ -0.16
SNX13-202ENST00000409604 MTMR7Q9Y216 660 aa14.04□□□□□ -0.16
SNX13-202ENST00000409604 CCDC27Q2M243 656 aa14.04□□□□□ -0.16
SNX13-202ENST00000409604 DIAPH3Q9NSV4 1193 aa14.04□□□□□ -0.16
SNX13-202ENST00000409604 DIP2CQ9Y2E4 1556 aa14.04□□□□□ -0.16
SNX13-202ENST00000409604 A0A087WZG4 1122 aa14.04□□□□□ -0.16
SNX13-202ENST00000409604 KDM4AO75164 1064 aa14.04□□□□□ -0.16
SNX13-202ENST00000409604 NUTM1Q86Y26 1132 aa14.04□□□□□ -0.16
SNX13-202ENST00000409604 XAGE3Q8WTP9 111 aa14.04□□□□□ -0.16
SNX13-202ENST00000409604 HSCBQ8IWL3 235 aa14.03□□□□□ -0.16
SNX13-202ENST00000409604 CEP152O94986 1710 aa14.03□□□□□ -0.16
SNX13-202ENST00000409604 LRRFIP2Q9Y608 721 aaKnown RBP14.03□□□□□ -0.16
SNX13-202ENST00000409604 EIF2AK4Q9P2K8 1649 aaKnown RBP14.03□□□□□ -0.16
SNX13-202ENST00000409604 WASHC4Q2M389 1173 aa14.03□□□□□ -0.16
SNX13-202ENST00000409604 ERICH6BQ5W0A0 696 aa14.03□□□□□ -0.16
SNX13-202ENST00000409604 G2E3Q7L622 706 aa14.03□□□□□ -0.16
SNX13-202ENST00000409604 CLASRPQ8N2M8 674 aaKnown RBP14.03□□□□□ -0.16
SNX13-202ENST00000409604 AXIN2Q9Y2T1 843 aa14.03□□□□□ -0.16
SNX13-202ENST00000409604 MCCP23508 829 aa14.02□□□□□ -0.16
SNX13-202ENST00000409604 ARAP3Q8WWN8 1544 aa14.02□□□□□ -0.16
SNX13-202ENST00000409604 DDRGK1Q96HY6 314 aa14.02□□□□□ -0.17
SNX13-202ENST00000409604 TRMT112Q9UI30 125 aaKnown RBP14.02□□□□□ -0.17
SNX13-202ENST00000409604 EDC4Q6P2E9 1401 aaKnown RBP14.02□□□□□ -0.17
SNX13-202ENST00000409604 ZPR1O75312 459 aa14.01□□□□□ -0.17
SNX13-202ENST00000409604 A1BGP04217 495 aa14.01□□□□□ -0.17
SNX13-202ENST00000409604 RLBP1P12271 317 aa14.01□□□□□ -0.17
SNX13-202ENST00000409604 PDE3AQ14432 1141 aa14.01□□□□□ -0.17
SNX13-202ENST00000409604 CWF19L2Q2TBE0 894 aaKnown RBP14.01□□□□□ -0.17
SNX13-202ENST00000409604 DBF4Q9UBU7 674 aaPredicted RBP14.01□□□□□ -0.17
SNX13-202ENST00000409604 ABCA6Q8N139 1617 aa14.01□□□□□ -0.17
SNX13-202ENST00000409604 AKAP4Q5JQC9 854 aa14.01□□□□□ -0.17
SNX13-202ENST00000409604 MPHOSPH8Q99549 860 aa14.01□□□□□ -0.17
SNX13-202ENST00000409604 MEIS3Q99687 375 aa14.01□□□□□ -0.17
SNX13-202ENST00000409604 KIDINS220Q9ULH0 1771 aa14.01□□□□□ -0.17
SNX13-202ENST00000409604 CCDC57Q2TAC2 916 aa14□□□□□ -0.17
SNX13-202ENST00000409604 DNAAF4Q8WXU2 420 aa14□□□□□ -0.17
SNX13-202ENST00000409604 HSP90B1P14625 803 aaKnown RBP14□□□□□ -0.17
SNX13-202ENST00000409604 TRIM35Q9UPQ4 493 aa14□□□□□ -0.17
SNX13-202ENST00000409604 PUS7Q96PZ0 661 aaKnown RBP14□□□□□ -0.17
SNX13-202ENST00000409604 FKBP4Q02790 459 aaKnown RBP eCLIP14□□□□□ -0.17
SNX13-202ENST00000409604 SNRPA1P09661 255 aaKnown RBP13.99□□□□□ -0.17
SNX13-202ENST00000409604 CCT4P50991 539 aaKnown RBP13.99□□□□□ -0.17
SNX13-202ENST00000409604 SIRT1Q96EB6 747 aa13.99□□□□□ -0.17
SNX13-202ENST00000409604 PLXNC1O60486 1568 aa13.99□□□□□ -0.17
SNX13-202ENST00000409604 POLR3AO14802 1390 aaPredicted RBP13.99□□□□□ -0.17
SNX13-202ENST00000409604 RNF17Q9BXT8 1623 aaKnown RBP13.99□□□□□ -0.17
SNX13-202ENST00000409604 CLTCQ00610 1675 aaKnown RBP13.99□□□□□ -0.17
SNX13-202ENST00000409604 RNMTO43148 476 aaKnown RBP13.99□□□□□ -0.17
SNX13-202ENST00000409604 CCDC8Q9H0W5 538 aaPredicted RBP13.98□□□□□ -0.17
SNX13-202ENST00000409604 ARHGAP31Q2M1Z3 1444 aa13.98□□□□□ -0.17
SNX13-202ENST00000409604 IL17REQ8NFR9 667 aa13.98□□□□□ -0.17
SNX13-202ENST00000409604 AK7Q96M32 723 aa13.98□□□□□ -0.17
SNX13-202ENST00000409604 ANKRD13DQ6ZTN6 518 aa13.97□□□□□ -0.17
SNX13-202ENST00000409604 AACSQ86V21 672 aa13.97□□□□□ -0.17
SNX13-202ENST00000409604 ZNF496Q96IT1 587 aaPredicted RBP13.97□□□□□ -0.17
SNX13-202ENST00000409604 MAP3K4Q9Y6R4 1608 aa13.97□□□□□ -0.17
SNX13-202ENST00000409604 FSD1Q9BTV5 496 aa13.97□□□□□ -0.17
SNX13-202ENST00000409604 TET3O43151 1660 aa13.97□□□□□ -0.17
SNX13-202ENST00000409604 KIF1BO60333 1816 aa13.97□□□□□ -0.17
SNX13-202ENST00000409604 VAMP4O75379 141 aa13.97□□□□□ -0.17
SNX13-202ENST00000409604 FOSBP53539 338 aa13.97□□□□□ -0.17
SNX13-202ENST00000409604 NOP58Q9Y2X3 529 aaKnown RBP13.97□□□□□ -0.17
SNX13-202ENST00000409604 PRAMEF22A3QJZ6 481 aa13.96□□□□□ -0.17
SNX13-202ENST00000409604 ARHGEF25Q86VW2 580 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms