RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ITSN1Q15811 1721 aa19.14■□□□□ 0.65
LIMS2-205ENST00000409455 TMEM57Q8N5G2 664 aa19.14■□□□□ 0.65
LIMS2-205ENST00000409455 DDX49Q9Y6V7 483 aaKnown RBP19.14■□□□□ 0.65
LIMS2-205ENST00000409455 KIF2CQ99661 725 aa19.13■□□□□ 0.65
LIMS2-205ENST00000409455 KIF16BQ96L93 1317 aa19.13■□□□□ 0.65
LIMS2-205ENST00000409455 TERF1P54274 439 aa19.13■□□□□ 0.65
LIMS2-205ENST00000409455 RRS1Q15050 365 aaKnown RBP19.13■□□□□ 0.65
LIMS2-205ENST00000409455 IPO8O15397 1037 aaKnown RBP19.12■□□□□ 0.65
LIMS2-205ENST00000409455 CLEC17AQ6ZS10 378 aa19.12■□□□□ 0.65
LIMS2-205ENST00000409455 AATKQ6ZMQ8 1374 aa19.11■□□□□ 0.65
LIMS2-205ENST00000409455 KDM4FA0A1W2PPD8 638 aa19.11■□□□□ 0.65
LIMS2-205ENST00000409455 CD2BP2O95400 341 aaKnown RBP19.11■□□□□ 0.65
LIMS2-205ENST00000409455 SSFA2P28290 1259 aa19.11■□□□□ 0.65
LIMS2-205ENST00000409455 SSH2Q76I76 1423 aa19.11■□□□□ 0.65
LIMS2-205ENST00000409455 RGPD8O14715 1765 aaPredicted RBP19.11■□□□□ 0.65
LIMS2-205ENST00000409455 HSPA2P54652 639 aa19.11■□□□□ 0.65
LIMS2-205ENST00000409455 ANKARQ7Z5J8 1434 aa19.11■□□□□ 0.65
LIMS2-205ENST00000409455 C14orf37Q86TY3 774 aa19.1■□□□□ 0.65
LIMS2-205ENST00000409455 PLEKHF1Q96S99 279 aa19.09■□□□□ 0.65
LIMS2-205ENST00000409455 BAG4O95429 457 aaKnown RBP19.09■□□□□ 0.65
LIMS2-205ENST00000409455 HS1BP3Q53T59 392 aa19.09■□□□□ 0.65
LIMS2-205ENST00000409455 MAP2P11137 1827 aaKnown RBP19.08■□□□□ 0.65
LIMS2-205ENST00000409455 MAP7D2Q96T17 732 aa19.08■□□□□ 0.64
LIMS2-205ENST00000409455 NRKQ7Z2Y5 1582 aa19.07■□□□□ 0.64
LIMS2-205ENST00000409455 GAS2L2Q8NHY3 880 aa19.07■□□□□ 0.64
LIMS2-205ENST00000409455 TTC21AQ8NDW8 1320 aa19.07■□□□□ 0.64
LIMS2-205ENST00000409455 TMPOP42166 694 aaKnown RBP19.07■□□□□ 0.64
LIMS2-205ENST00000409455 ZNF445P59923 1031 aa19.07■□□□□ 0.64
LIMS2-205ENST00000409455 CALD1Q05682 793 aaKnown RBP19.07■□□□□ 0.64
LIMS2-205ENST00000409455 PROSER2Q86WR7 435 aaPredicted RBP19.07■□□□□ 0.64
LIMS2-205ENST00000409455 IL16Q14005 1332 aa19.07■□□□□ 0.64
LIMS2-205ENST00000409455 ADGRL3Q9HAR2 1447 aa19.07■□□□□ 0.64
LIMS2-205ENST00000409455 NALCNQ8IZF0 1738 aa19.06■□□□□ 0.64
LIMS2-205ENST00000409455 TBC1D9Q6ZT07 1266 aa19.06■□□□□ 0.64
LIMS2-205ENST00000409455 OVOS2A0A0J9YW53 1432 aa19.06■□□□□ 0.64
LIMS2-205ENST00000409455 OVOS2Q6IE36 1432 aa19.06■□□□□ 0.64
LIMS2-205ENST00000409455 GCC1Q96CN9 775 aa19.06■□□□□ 0.64
LIMS2-205ENST00000409455 FMN2Q9NZ56 1722 aa19.06■□□□□ 0.64
LIMS2-205ENST00000409455 SOX12O15370 315 aa19.05■□□□□ 0.64
LIMS2-205ENST00000409455 IL13P35225 146 aa19.05■□□□□ 0.64
LIMS2-205ENST00000409455 ANKRD45Q5TZF3 282 aa19.05■□□□□ 0.64
LIMS2-205ENST00000409455 PHF8Q9UPP1 1060 aa19.05■□□□□ 0.64
LIMS2-205ENST00000409455 RBM42Q9BTD8 480 aaKnown RBP19.05■□□□□ 0.64
LIMS2-205ENST00000409455 TRIM35Q9UPQ4 493 aa19.05■□□□□ 0.64
LIMS2-205ENST00000409455 RIPK4P57078 832 aa19.04■□□□□ 0.64
LIMS2-205ENST00000409455 ESCO1Q5FWF5 840 aa19.04■□□□□ 0.64
LIMS2-205ENST00000409455 RBM10P98175 930 aaKnown RBP19.04■□□□□ 0.64
LIMS2-205ENST00000409455 NOL7Q9UMY1 257 aaKnown RBP19.04■□□□□ 0.64
LIMS2-205ENST00000409455 R3HCC1Q9Y3T6 440 aaKnown RBP19.04■□□□□ 0.64
LIMS2-205ENST00000409455 FCHSD2O94868 740 aa19.03■□□□□ 0.64
LIMS2-205ENST00000409455 CHMP4BQ9H444 224 aaKnown RBP19.03■□□□□ 0.64
LIMS2-205ENST00000409455 NCLP19338 710 aaKnown RBP19.03■□□□□ 0.64
LIMS2-205ENST00000409455 ALDH1L2Q3SY69 923 aa19.03■□□□□ 0.64
LIMS2-205ENST00000409455 MCTP1Q6DN14 999 aa19.03■□□□□ 0.64
LIMS2-205ENST00000409455 CAVIN1Q6NZI2 390 aaKnown RBP19.03■□□□□ 0.64
LIMS2-205ENST00000409455 USP31Q70CQ4 1352 aa19.02■□□□□ 0.64
LIMS2-205ENST00000409455 CDK12Q9NYV4 1490 aaPredicted RBP19.02■□□□□ 0.64
LIMS2-205ENST00000409455 HMOX1P09601 288 aa19.02■□□□□ 0.64
LIMS2-205ENST00000409455 NUCB2P80303 420 aa19.02■□□□□ 0.64
LIMS2-205ENST00000409455 ZSCAN23Q3MJ62 389 aa19.02■□□□□ 0.64
LIMS2-205ENST00000409455 FAM13BQ9NYF5 915 aa19.02■□□□□ 0.64
LIMS2-205ENST00000409455 ZNF500O60304 480 aaPredicted RBP19.02■□□□□ 0.63
LIMS2-205ENST00000409455 NLRP6P59044 892 aa19.02■□□□□ 0.63
LIMS2-205ENST00000409455 NUTM2GQ5VZR2 741 aa19.01■□□□□ 0.63
LIMS2-205ENST00000409455 CDC45O75419 566 aa19.01■□□□□ 0.63
LIMS2-205ENST00000409455 PRKAR2BP31323 418 aa19■□□□□ 0.63
LIMS2-205ENST00000409455 ABTB2Q8N961 1025 aa19■□□□□ 0.63
LIMS2-205ENST00000409455 NWD1Q149M9 1564 aa19■□□□□ 0.63
LIMS2-205ENST00000409455 RABEP1Q15276 862 aa19■□□□□ 0.63
LIMS2-205ENST00000409455 ORAI2Q96SN7 254 aa19■□□□□ 0.63
LIMS2-205ENST00000409455 PDLIM2Q96JY6 352 aa18.99■□□□□ 0.63
LIMS2-205ENST00000409455 HSP90AB2PQ58FF8 381 aa18.99■□□□□ 0.63
LIMS2-205ENST00000409455 C19orf44Q9H6X5 657 aa18.99■□□□□ 0.63
LIMS2-205ENST00000409455 PSME1Q06323 249 aa18.98■□□□□ 0.63
LIMS2-205ENST00000409455 CSPP1Q1MSJ5 1256 aa18.98■□□□□ 0.63
LIMS2-205ENST00000409455 CFAP44Q96MT7 982 aa18.98■□□□□ 0.63
LIMS2-205ENST00000409455 UQCRHLA0A096LP55 91 aa18.98■□□□□ 0.63
LIMS2-205ENST00000409455 UQCRHP07919 91 aa18.98■□□□□ 0.63
LIMS2-205ENST00000409455 MTERF4Q7Z6M4 381 aaKnown RBP18.98■□□□□ 0.63
LIMS2-205ENST00000409455 MAP3K19Q56UN5 1328 aa18.97■□□□□ 0.63
LIMS2-205ENST00000409455 EIF4A2Q14240 407 aaKnown RBP18.97■□□□□ 0.63
LIMS2-205ENST00000409455 PHACTR3Q96KR7 559 aa18.97■□□□□ 0.63
LIMS2-205ENST00000409455 RBSNQ9H1K0 784 aa18.97■□□□□ 0.63
LIMS2-205ENST00000409455 LMBRD1Q9NUN5 540 aa18.97■□□□□ 0.63
LIMS2-205ENST00000409455 XPCQ01831 940 aaPredicted RBP18.97■□□□□ 0.63
LIMS2-205ENST00000409455 ZNF428Q96B54 188 aa18.97■□□□□ 0.63
LIMS2-205ENST00000409455 FOXO3O43524 673 aa18.96■□□□□ 0.63
LIMS2-205ENST00000409455 MCM5P33992 734 aa18.96■□□□□ 0.63
LIMS2-205ENST00000409455 AK9Q5TCS8 1911 aa18.96■□□□□ 0.63
LIMS2-205ENST00000409455 ZBTB7BO15156 539 aaPredicted RBP18.96■□□□□ 0.63
LIMS2-205ENST00000409455 ZKSCAN5Q9Y2L8 839 aa18.96■□□□□ 0.63
LIMS2-205ENST00000409455 CYP2E1P05181 493 aaPredicted RBP18.95■□□□□ 0.62
LIMS2-205ENST00000409455 PRIM1P49642 420 aaKnown RBP18.95■□□□□ 0.62
LIMS2-205ENST00000409455 C1orf115Q9H7X2 142 aa18.95■□□□□ 0.62
LIMS2-205ENST00000409455 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.95■□□□□ 0.62
LIMS2-205ENST00000409455 PIK3C2AO00443 1686 aa18.95■□□□□ 0.62
LIMS2-205ENST00000409455 TMEM94Q12767 1356 aa18.94■□□□□ 0.62
LIMS2-205ENST00000409455 BRPF1P55201 1214 aaPredicted RBP18.94■□□□□ 0.62
LIMS2-205ENST00000409455 CWC22Q9HCG8 908 aaKnown RBP18.94■□□□□ 0.62
LIMS2-205ENST00000409455 LMTK3Q96Q04 1460 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms