RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 VAMP4O75379 141 aa16.66■□□□□ 0.26
HMGA2-204ENST00000403681 GNL2Q13823 731 aaKnown RBP16.66■□□□□ 0.26
HMGA2-204ENST00000403681 LTV1Q96GA3 475 aaPredicted RBP16.66■□□□□ 0.26
HMGA2-204ENST00000403681 TMEM63CQ9P1W3 806 aa16.66■□□□□ 0.26
HMGA2-204ENST00000403681 NOS1P29475 1434 aa16.66■□□□□ 0.26
HMGA2-204ENST00000403681 MAP3K11Q16584 847 aa16.66■□□□□ 0.26
HMGA2-204ENST00000403681 HSP90AB4PQ58FF6 505 aa16.66■□□□□ 0.26
HMGA2-204ENST00000403681 CCDC73Q6ZRK6 1079 aa16.66■□□□□ 0.26
HMGA2-204ENST00000403681 TSPYL6Q8N831 410 aa16.66■□□□□ 0.26
HMGA2-204ENST00000403681 CEP170Q5SW79 1584 aa16.66■□□□□ 0.26
HMGA2-204ENST00000403681 TSHZ3Q63HK5 1081 aa16.66■□□□□ 0.26
HMGA2-204ENST00000403681 CYP46A1Q9Y6A2 500 aa16.66■□□□□ 0.26
HMGA2-204ENST00000403681 SYCP2Q9BX26 1530 aa16.65■□□□□ 0.26
HMGA2-204ENST00000403681 CAMK4Q16566 473 aa16.65■□□□□ 0.26
HMGA2-204ENST00000403681 TAF3Q5VWG9 929 aa16.65■□□□□ 0.26
HMGA2-204ENST00000403681 C16orf45Q96MC5 204 aaPredicted RBP16.65■□□□□ 0.26
HMGA2-204ENST00000403681 CGNQ9P2M7 1197 aaKnown RBP16.65■□□□□ 0.26
HMGA2-204ENST00000403681 TRIM35Q9UPQ4 493 aa16.65■□□□□ 0.26
HMGA2-204ENST00000403681 ADGBQ8N7X0 1667 aa16.65■□□□□ 0.26
HMGA2-204ENST00000403681 ANKRD44Q8N8A2 993 aa16.65■□□□□ 0.26
HMGA2-204ENST00000403681 GIMAP6Q6P9H5 292 aa16.64■□□□□ 0.26
HMGA2-204ENST00000403681 CCAR2Q8N163 923 aaKnown RBP16.64■□□□□ 0.26
HMGA2-204ENST00000403681 LARP6Q9BRS8 491 aaKnown RBP16.64■□□□□ 0.26
HMGA2-204ENST00000403681 PKP1Q13835 747 aa16.64■□□□□ 0.25
HMGA2-204ENST00000403681 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
HMGA2-204ENST00000403681 ARGLU1Q9NWB6 273 aaPredicted RBP16.64■□□□□ 0.25
HMGA2-204ENST00000403681 UBE2HP62256 183 aa16.64■□□□□ 0.25
HMGA2-204ENST00000403681 FERMT3Q86UX7 667 aa16.64■□□□□ 0.25
HMGA2-204ENST00000403681 RRS1Q15050 365 aaKnown RBP16.64■□□□□ 0.25
HMGA2-204ENST00000403681 MYRIPQ8NFW9 859 aa16.64■□□□□ 0.25
HMGA2-204ENST00000403681 C9orf78Q9NZ63 289 aaPredicted RBP16.64■□□□□ 0.25
HMGA2-204ENST00000403681 CCDC83Q8IWF9 413 aa16.63■□□□□ 0.25
HMGA2-204ENST00000403681 MNS1Q8NEH6 495 aa16.63■□□□□ 0.25
HMGA2-204ENST00000403681 TNNT1P13805 278 aa16.63■□□□□ 0.25
HMGA2-204ENST00000403681 CCDC30Q5VVM6 783 aa16.63■□□□□ 0.25
HMGA2-204ENST00000403681 GTPBP4Q9BZE4 634 aaKnown RBP16.63■□□□□ 0.25
HMGA2-204ENST00000403681 FYB1O15117 783 aa16.63■□□□□ 0.25
HMGA2-204ENST00000403681 PSMA5P28066 241 aa16.63■□□□□ 0.25
HMGA2-204ENST00000403681 CLASRPQ8N2M8 674 aaKnown RBP16.63■□□□□ 0.25
HMGA2-204ENST00000403681 FOSBP53539 338 aa16.62■□□□□ 0.25
HMGA2-204ENST00000403681 CWC27Q6UX04 472 aaKnown RBP16.62■□□□□ 0.25
HMGA2-204ENST00000403681 DUOX2Q9NRD8 1548 aa16.62■□□□□ 0.25
HMGA2-204ENST00000403681 ANKRD36BQ8N2N9 1353 aa16.62■□□□□ 0.25
HMGA2-204ENST00000403681 STX6O43752 255 aa16.62■□□□□ 0.25
HMGA2-204ENST00000403681 FBLN1P23142 703 aa16.62■□□□□ 0.25
HMGA2-204ENST00000403681 C8orf58Q8NAV2 365 aa16.62■□□□□ 0.25
HMGA2-204ENST00000403681 JAKMIP1Q96N16 626 aaKnown RBP16.62■□□□□ 0.25
HMGA2-204ENST00000403681 F6X3S4 739 aa16.62■□□□□ 0.25
HMGA2-204ENST00000403681 IGSF3O75054 1194 aa16.62■□□□□ 0.25
HMGA2-204ENST00000403681 GPS2Q13227 327 aa16.62■□□□□ 0.25
HMGA2-204ENST00000403681 TSC1Q92574 1164 aa16.62■□□□□ 0.25
HMGA2-204ENST00000403681 PDRG1Q9NUG6 133 aa16.62■□□□□ 0.25
HMGA2-204ENST00000403681 EMILIN1Q9Y6C2 1016 aa16.62■□□□□ 0.25
HMGA2-204ENST00000403681 CASTP20810 708 aaKnown RBP16.61■□□□□ 0.25
HMGA2-204ENST00000403681 PDE1AP54750 535 aa16.61■□□□□ 0.25
HMGA2-204ENST00000403681 FILIP1Q7Z7B0 1213 aa16.61■□□□□ 0.25
HMGA2-204ENST00000403681 NUTM1Q86Y26 1132 aa16.61■□□□□ 0.25
HMGA2-204ENST00000403681 MEIS3Q99687 375 aa16.61■□□□□ 0.25
HMGA2-204ENST00000403681 CNPY2Q9Y2B0 182 aa16.61■□□□□ 0.25
HMGA2-204ENST00000403681 FAM83GA6ND36 823 aa16.61■□□□□ 0.25
HMGA2-204ENST00000403681 OTUD7AQ8TE49 926 aaPredicted RBP16.61■□□□□ 0.25
HMGA2-204ENST00000403681 SDF4Q9BRK5 362 aa16.61■□□□□ 0.25
HMGA2-204ENST00000403681 LIMCH1Q9UPQ0 1083 aa16.61■□□□□ 0.25
HMGA2-204ENST00000403681 ERICH4A6NGS2 130 aa16.61■□□□□ 0.25
HMGA2-204ENST00000403681 MCM10Q7L590 875 aa16.61■□□□□ 0.25
HMGA2-204ENST00000403681 SPATA32Q96LK8 384 aa16.61■□□□□ 0.25
HMGA2-204ENST00000403681 POLR1AO95602 1720 aaPredicted RBP16.61■□□□□ 0.25
HMGA2-204ENST00000403681 NGDNQ8NEJ9 315 aaKnown RBP16.6■□□□□ 0.25
HMGA2-204ENST00000403681 ZSCAN31Q96LW9 406 aaPredicted RBP16.6■□□□□ 0.25
HMGA2-204ENST00000403681 CEBPZQ03701 1054 aaKnown RBP16.6■□□□□ 0.25
HMGA2-204ENST00000403681 C17orf53Q8N3J3 647 aaPredicted RBP16.6■□□□□ 0.25
HMGA2-204ENST00000403681 MIS18AQ9NYP9 233 aa16.6■□□□□ 0.25
HMGA2-204ENST00000403681 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
HMGA2-204ENST00000403681 PIBF1Q8WXW3 757 aa16.6■□□□□ 0.25
HMGA2-204ENST00000403681 ESYT1Q9BSJ8 1104 aa16.6■□□□□ 0.25
HMGA2-204ENST00000403681 IBTKQ9P2D0 1353 aaPredicted RBP16.6■□□□□ 0.25
HMGA2-204ENST00000403681 CKAP2LQ8IYA6 745 aa16.6■□□□□ 0.25
HMGA2-204ENST00000403681 GPT2Q8TD30 523 aa16.6■□□□□ 0.25
HMGA2-204ENST00000403681 GORABQ5T7V8 394 aa16.59■□□□□ 0.25
HMGA2-204ENST00000403681 KINO60870 393 aaKnown RBP16.59■□□□□ 0.25
HMGA2-204ENST00000403681 CYB5RLQ6IPT4 315 aa16.59■□□□□ 0.25
HMGA2-204ENST00000403681 CHAMP1Q96JM3 812 aa16.59■□□□□ 0.25
HMGA2-204ENST00000403681 NAT10Q9H0A0 1025 aaKnown RBP16.59■□□□□ 0.25
HMGA2-204ENST00000403681 KDM5DQ9BY66 1539 aa16.59■□□□□ 0.25
HMGA2-204ENST00000403681 ZSCAN22P10073 491 aaPredicted RBP16.59■□□□□ 0.25
HMGA2-204ENST00000403681 ZNF692Q9BU19 519 aaPredicted RBP16.58■□□□□ 0.24
HMGA2-204ENST00000403681 ANAPC15P60006 121 aa16.58■□□□□ 0.24
HMGA2-204ENST00000403681 STK3Q13188 491 aa16.58■□□□□ 0.24
HMGA2-204ENST00000403681 G3BP1Q13283 466 aaKnown RBP eCLIP16.58■□□□□ 0.24
HMGA2-204ENST00000403681 PTPN14Q15678 1187 aa16.58■□□□□ 0.24
HMGA2-204ENST00000403681 LMOD2Q6P5Q4 547 aa16.58■□□□□ 0.24
HMGA2-204ENST00000403681 INTS4Q96HW7 963 aaKnown RBP16.58■□□□□ 0.24
HMGA2-204ENST00000403681 PRDM15P57071 1507 aaPredicted RBP16.57■□□□□ 0.24
HMGA2-204ENST00000403681 GSPT1P15170 499 aaKnown RBP16.57■□□□□ 0.24
HMGA2-204ENST00000403681 DCAF8L1A6NGE4 600 aa16.57■□□□□ 0.24
HMGA2-204ENST00000403681 KDM4AO75164 1064 aa16.57■□□□□ 0.24
HMGA2-204ENST00000403681 CEP85Q6P2H3 762 aa16.57■□□□□ 0.24
HMGA2-204ENST00000403681 DDX54Q8TDD1 881 aaKnown RBP16.57■□□□□ 0.24
HMGA2-204ENST00000403681 FMNL2Q96PY5 1086 aa16.57■□□□□ 0.24
HMGA2-204ENST00000403681 GOLGA6L1Q8N7Z2 621 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms