RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 COG3Q96JB2 828 aa24.79■■□□□ 1.56
CCDC47-202ENST00000403162 LNPKQ9C0E8 428 aa24.79■■□□□ 1.56
CCDC47-202ENST00000403162 ARHGAP45Q92619 1136 aa24.78■■□□□ 1.56
CCDC47-202ENST00000403162 GCC1Q96CN9 775 aa24.77■■□□□ 1.56
CCDC47-202ENST00000403162 RRAGDQ9NQL2 400 aaPredicted RBP24.77■■□□□ 1.56
CCDC47-202ENST00000403162 PRKAR2BP31323 418 aa24.76■■□□□ 1.55
CCDC47-202ENST00000403162 CIZ1Q9ULV3 898 aaPredicted RBP24.76■■□□□ 1.55
CCDC47-202ENST00000403162 ZBTB7BO15156 539 aaPredicted RBP24.76■■□□□ 1.55
CCDC47-202ENST00000403162 CALD1Q05682 793 aaKnown RBP24.75■■□□□ 1.55
CCDC47-202ENST00000403162 BRINP3Q76B58 766 aa24.75■■□□□ 1.55
CCDC47-202ENST00000403162 KRT28Q7Z3Y7 464 aa24.75■■□□□ 1.55
CCDC47-202ENST00000403162 DDX17Q92841 729 aaKnown RBP24.74■■□□□ 1.55
CCDC47-202ENST00000403162 GZF1Q9H116 711 aaPredicted RBP24.74■■□□□ 1.55
CCDC47-202ENST00000403162 NFE2L2Q16236 605 aa24.74■■□□□ 1.55
CCDC47-202ENST00000403162 MRPL50Q8N5N7 158 aaKnown RBP24.74■■□□□ 1.55
CCDC47-202ENST00000403162 POLKQ9UBT6 870 aa24.74■■□□□ 1.55
CCDC47-202ENST00000403162 ISY1Q9ULR0 285 aaKnown RBP24.74■■□□□ 1.55
CCDC47-202ENST00000403162 ABTB2Q8N961 1025 aa24.73■■□□□ 1.55
CCDC47-202ENST00000403162 VAMP4O75379 141 aa24.73■■□□□ 1.55
CCDC47-202ENST00000403162 PRKCSHP14314 528 aaPredicted RBP24.73■■□□□ 1.55
CCDC47-202ENST00000403162 MRE11P49959 708 aa24.73■■□□□ 1.55
CCDC47-202ENST00000403162 MAP2P11137 1827 aaKnown RBP24.72■■□□□ 1.55
CCDC47-202ENST00000403162 NUTM2GQ5VZR2 741 aa24.72■■□□□ 1.55
CCDC47-202ENST00000403162 PIK3C2AO00443 1686 aa24.72■■□□□ 1.55
CCDC47-202ENST00000403162 OVOS2A0A0J9YW53 1432 aa24.71■■□□□ 1.55
CCDC47-202ENST00000403162 NLRP6P59044 892 aa24.71■■□□□ 1.55
CCDC47-202ENST00000403162 OVOS2Q6IE36 1432 aa24.71■■□□□ 1.55
CCDC47-202ENST00000403162 NPHP3Q7Z494 1330 aa24.71■■□□□ 1.55
CCDC47-202ENST00000403162 FBLN1P23142 703 aa24.7■■□□□ 1.55
CCDC47-202ENST00000403162 KIF2CQ99661 725 aa24.7■■□□□ 1.55
CCDC47-202ENST00000403162 IFT57Q9NWB7 429 aa24.7■■□□□ 1.55
CCDC47-202ENST00000403162 ABCC4O15439 1325 aa24.7■■□□□ 1.54
CCDC47-202ENST00000403162 GNAI1P63096 354 aa24.7■■□□□ 1.54
CCDC47-202ENST00000403162 ANKRD45Q5TZF3 282 aa24.7■■□□□ 1.54
CCDC47-202ENST00000403162 USP31Q70CQ4 1352 aa24.69■■□□□ 1.54
CCDC47-202ENST00000403162 PANK2Q9BZ23 570 aa24.69■■□□□ 1.54
CCDC47-202ENST00000403162 HSP90AB1P08238 724 aaKnown RBP24.68■■□□□ 1.54
CCDC47-202ENST00000403162 ZNF853P0CG23 659 aa24.68■■□□□ 1.54
CCDC47-202ENST00000403162 LMOD2Q6P5Q4 547 aa24.68■■□□□ 1.54
CCDC47-202ENST00000403162 TNPO1Q92973 898 aaKnown RBP24.67■■□□□ 1.54
CCDC47-202ENST00000403162 PHACTR3Q96KR7 559 aa24.67■■□□□ 1.54
CCDC47-202ENST00000403162 ARXQ96QS3 562 aa24.67■■□□□ 1.54
CCDC47-202ENST00000403162 SOX12O15370 315 aa24.67■■□□□ 1.54
CCDC47-202ENST00000403162 RAB3GAP1Q15042 981 aa24.67■■□□□ 1.54
CCDC47-202ENST00000403162 TRPM3Q9HCF6 1732 aaPredicted RBP24.66■■□□□ 1.54
CCDC47-202ENST00000403162 CDK12Q9NYV4 1490 aaPredicted RBP24.66■■□□□ 1.54
CCDC47-202ENST00000403162 PTMSP20962 102 aa24.66■■□□□ 1.54
CCDC47-202ENST00000403162 GBP4Q96PP9 640 aa24.66■■□□□ 1.54
CCDC47-202ENST00000403162 TBC1D9Q6ZT07 1266 aa24.65■■□□□ 1.54
CCDC47-202ENST00000403162 TSPYL6Q8N831 410 aa24.65■■□□□ 1.54
CCDC47-202ENST00000403162 EIF5BO60841 1220 aaKnown RBP24.64■■□□□ 1.54
CCDC47-202ENST00000403162 SIRT2Q8IXJ6 389 aa24.64■■□□□ 1.54
CCDC47-202ENST00000403162 AATKQ6ZMQ8 1374 aa24.64■■□□□ 1.54
CCDC47-202ENST00000403162 DLG5Q8TDM6 1919 aa24.64■■□□□ 1.53
CCDC47-202ENST00000403162 GRPEL1Q9HAV7 217 aa24.64■■□□□ 1.53
CCDC47-202ENST00000403162 KIF24Q5T7B8 1368 aa24.63■■□□□ 1.53
CCDC47-202ENST00000403162 HMOX1P09601 288 aa24.63■■□□□ 1.53
CCDC47-202ENST00000403162 RRS1Q15050 365 aaKnown RBP24.63■■□□□ 1.53
CCDC47-202ENST00000403162 C1orf115Q9H7X2 142 aa24.63■■□□□ 1.53
CCDC47-202ENST00000403162 MBIPQ9NS73 344 aa24.63■■□□□ 1.53
CCDC47-202ENST00000403162 PXDNQ92626 1479 aa24.63■■□□□ 1.53
CCDC47-202ENST00000403162 IL13P35225 146 aa24.63■■□□□ 1.53
CCDC47-202ENST00000403162 SKOR2Q2VWA4 1001 aaPredicted RBP24.63■■□□□ 1.53
CCDC47-202ENST00000403162 THUMPD2Q9BTF0 503 aaKnown RBP24.63■■□□□ 1.53
CCDC47-202ENST00000403162 K7ELQ4 463 aaPredicted RBP24.62■■□□□ 1.53
CCDC47-202ENST00000403162 SBNO1A3KN83 1393 aa24.62■■□□□ 1.53
CCDC47-202ENST00000403162 CLCN1P35523 988 aa24.61■■□□□ 1.53
CCDC47-202ENST00000403162 EMILIN1Q9Y6C2 1016 aa24.61■■□□□ 1.53
CCDC47-202ENST00000403162 PLEKHG5O94827 1062 aa24.61■■□□□ 1.53
CCDC47-202ENST00000403162 LMOD3Q0VAK6 560 aa24.61■■□□□ 1.53
CCDC47-202ENST00000403162 API5Q9BZZ5 524 aaKnown RBP24.6■■□□□ 1.53
CCDC47-202ENST00000403162 MARF1Q9Y4F3 1742 aaKnown RBP24.6■■□□□ 1.53
CCDC47-202ENST00000403162 TWISTNBQ3B726 338 aaPredicted RBP24.6■■□□□ 1.53
CCDC47-202ENST00000403162 CFAP44Q96MT7 982 aa24.6■■□□□ 1.53
CCDC47-202ENST00000403162 USP54Q70EL1 1684 aa24.6■■□□□ 1.53
CCDC47-202ENST00000403162 CDC45O75419 566 aa24.59■■□□□ 1.53
CCDC47-202ENST00000403162 CD2BP2O95400 341 aaKnown RBP24.59■■□□□ 1.53
CCDC47-202ENST00000403162 TOM1O60784 492 aa24.59■■□□□ 1.53
CCDC47-202ENST00000403162 TNS3Q68CZ2 1445 aa24.58■■□□□ 1.53
CCDC47-202ENST00000403162 SOS2Q07890 1332 aaPredicted RBP24.58■■□□□ 1.52
CCDC47-202ENST00000403162 ALS2Q96Q42 1657 aa24.57■■□□□ 1.52
CCDC47-202ENST00000403162 SPATA31A3Q5VYP0 1347 aa24.57■■□□□ 1.52
CCDC47-202ENST00000403162 ROBO1Q9Y6N7 1651 aa24.57■■□□□ 1.52
CCDC47-202ENST00000403162 HSP90AA1P07900 732 aaKnown RBP24.56■■□□□ 1.52
CCDC47-202ENST00000403162 CLEC17AQ6ZS10 378 aa24.56■■□□□ 1.52
CCDC47-202ENST00000403162 ELL2O00472 640 aaPredicted RBP24.55■■□□□ 1.52
CCDC47-202ENST00000403162 NHSL1Q5SYE7 1610 aa24.55■■□□□ 1.52
CCDC47-202ENST00000403162 UBAP1LF5GYI3 381 aa24.54■■□□□ 1.52
CCDC47-202ENST00000403162 PIP4K2BP78356 416 aa24.54■■□□□ 1.52
CCDC47-202ENST00000403162 C8orf58Q8NAV2 365 aa24.54■■□□□ 1.52
CCDC47-202ENST00000403162 CERKQ8TCT0 537 aa24.54■■□□□ 1.52
CCDC47-202ENST00000403162 MAP3K19Q56UN5 1328 aa24.54■■□□□ 1.52
CCDC47-202ENST00000403162 KCNH5Q8NCM2 988 aa24.53■■□□□ 1.52
CCDC47-202ENST00000403162 GSPT1P15170 499 aaKnown RBP24.53■■□□□ 1.52
CCDC47-202ENST00000403162 PLEKHM2Q8IWE5 1019 aa24.53■■□□□ 1.52
CCDC47-202ENST00000403162 ARHGEF10O15013 1369 aa24.53■■□□□ 1.52
CCDC47-202ENST00000403162 RBM42Q9BTD8 480 aaKnown RBP24.52■■□□□ 1.52
CCDC47-202ENST00000403162 DCTPP1Q9H773 170 aa24.52■■□□□ 1.52
CCDC47-202ENST00000403162 GCP02774 474 aa24.52■■□□□ 1.52
CCDC47-202ENST00000403162 GAS2L2Q8NHY3 880 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms