RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 GLIPR1L2Q4G1C9 344 aa11.12□□□□□ -0.63
GIN1-201ENST00000399004 PRR36Q9H6K5 1346 aa11.12□□□□□ -0.63
GIN1-201ENST00000399004 SLIT3O75094 1523 aa11.11□□□□□ -0.63
GIN1-201ENST00000399004 TRIM27P14373 513 aa11.11□□□□□ -0.63
GIN1-201ENST00000399004 NFE2L2Q16236 605 aa11.11□□□□□ -0.63
GIN1-201ENST00000399004 ATF7IPQ6VMQ6 1270 aa11.11□□□□□ -0.63
GIN1-201ENST00000399004 RBM42Q9BTD8 480 aaKnown RBP11.11□□□□□ -0.63
GIN1-201ENST00000399004 NOL8Q76FK4 1167 aaKnown RBP11.11□□□□□ -0.63
GIN1-201ENST00000399004 RWDD1Q9H446 243 aaPredicted RBP11.11□□□□□ -0.63
GIN1-201ENST00000399004 ATP10DQ9P241 1426 aa11.1□□□□□ -0.63
GIN1-201ENST00000399004 FBLN1P23142 703 aa11.1□□□□□ -0.63
GIN1-201ENST00000399004 FAM69CQ0P6D2 419 aa11.1□□□□□ -0.63
GIN1-201ENST00000399004 ZNF692Q9BU19 519 aaPredicted RBP11.1□□□□□ -0.63
GIN1-201ENST00000399004 ZMYND15Q9H091 742 aa11.1□□□□□ -0.63
GIN1-201ENST00000399004 IBTKQ9P2D0 1353 aaPredicted RBP11.1□□□□□ -0.63
GIN1-201ENST00000399004 NPM3O75607 178 aaKnown RBP11.1□□□□□ -0.63
GIN1-201ENST00000399004 DZIP1LQ8IYY4 767 aaKnown RBP11.1□□□□□ -0.63
GIN1-201ENST00000399004 DDX19BQ9UMR2 479 aa11.1□□□□□ -0.63
GIN1-201ENST00000399004 KIF1AQ12756 1690 aa11.1□□□□□ -0.63
GIN1-201ENST00000399004 CABP1Q9NZU7 370 aa11.09□□□□□ -0.63
GIN1-201ENST00000399004 ALS2Q96Q42 1657 aa11.09□□□□□ -0.63
GIN1-201ENST00000399004 MRPL50Q8N5N7 158 aaKnown RBP11.09□□□□□ -0.63
GIN1-201ENST00000399004 SSH1Q8WYL5 1049 aa11.09□□□□□ -0.63
GIN1-201ENST00000399004 EXOSC9Q06265 439 aaKnown RBP11.09□□□□□ -0.63
GIN1-201ENST00000399004 NUCB1Q02818 461 aa11.08□□□□□ -0.64
GIN1-201ENST00000399004 GRPEL1Q9HAV7 217 aa11.08□□□□□ -0.64
GIN1-201ENST00000399004 VAMP4O75379 141 aa11.08□□□□□ -0.64
GIN1-201ENST00000399004 CHAMP1Q96JM3 812 aa11.08□□□□□ -0.64
GIN1-201ENST00000399004 GGNBP2Q9H3C7 697 aa11.08□□□□□ -0.64
GIN1-201ENST00000399004 PARP4Q9UKK3 1724 aaKnown RBP11.07□□□□□ -0.64
GIN1-201ENST00000399004 CALD1Q05682 793 aaKnown RBP11.07□□□□□ -0.64
GIN1-201ENST00000399004 CHMP5Q9NZZ3 219 aa11.07□□□□□ -0.64
GIN1-201ENST00000399004 OVOS2A0A0G2JMS6 1433 aa11.07□□□□□ -0.64
GIN1-201ENST00000399004 PLEKHG2Q9H7P9 1386 aa11.07□□□□□ -0.64
GIN1-201ENST00000399004 MINK1Q8N4C8 1332 aaPredicted RBP11.07□□□□□ -0.64
GIN1-201ENST00000399004 TTC21AQ8NDW8 1320 aa11.07□□□□□ -0.64
GIN1-201ENST00000399004 RBM25P49756 843 aaKnown RBP11.07□□□□□ -0.64
GIN1-201ENST00000399004 ANKRD45Q5TZF3 282 aa11.07□□□□□ -0.64
GIN1-201ENST00000399004 ERBB4Q15303 1308 aa11.07□□□□□ -0.64
GIN1-201ENST00000399004 SRPK2P78362 688 aaKnown RBP11.07□□□□□ -0.64
GIN1-201ENST00000399004 ZBTB7BO15156 539 aaPredicted RBP11.06□□□□□ -0.64
GIN1-201ENST00000399004 THUMPD2Q9BTF0 503 aaKnown RBP11.06□□□□□ -0.64
GIN1-201ENST00000399004 FAM13BQ9NYF5 915 aa11.06□□□□□ -0.64
GIN1-201ENST00000399004 SOS1Q07889 1333 aaPredicted RBP11.06□□□□□ -0.64
GIN1-201ENST00000399004 IL17RAQ96F46 866 aa11.06□□□□□ -0.64
GIN1-201ENST00000399004 TTC21BQ7Z4L5 1316 aa11.06□□□□□ -0.64
GIN1-201ENST00000399004 ESPNB1AK53 854 aa11.05□□□□□ -0.64
GIN1-201ENST00000399004 CFAP44Q96MT7 982 aa11.05□□□□□ -0.64
GIN1-201ENST00000399004 CCDC61Q9Y6R9 512 aa11.05□□□□□ -0.64
GIN1-201ENST00000399004 RGPD2P0DJD1 1756 aa11.05□□□□□ -0.64
GIN1-201ENST00000399004 GAS2L3Q86XJ1 694 aa11.05□□□□□ -0.64
GIN1-201ENST00000399004 HDGFP51858 240 aaKnown RBP11.05□□□□□ -0.64
GIN1-201ENST00000399004 DDX49Q9Y6V7 483 aaKnown RBP11.05□□□□□ -0.64
GIN1-201ENST00000399004 ANP32BQ92688 251 aaKnown RBP11.04□□□□□ -0.64
GIN1-201ENST00000399004 TNPO1Q92973 898 aaKnown RBP11.04□□□□□ -0.64
GIN1-201ENST00000399004 NUDT16Q96DE0 195 aaKnown RBP11.04□□□□□ -0.64
GIN1-201ENST00000399004 NOB1Q9ULX3 412 aaKnown RBP11.04□□□□□ -0.64
GIN1-201ENST00000399004 COL18A1P39060 1754 aa11.04□□□□□ -0.64
GIN1-201ENST00000399004 SBNO1A3KN83 1393 aa11.04□□□□□ -0.64
GIN1-201ENST00000399004 RIPK4P57078 832 aa11.04□□□□□ -0.64
GIN1-201ENST00000399004 SNX21Q969T3 373 aa11.04□□□□□ -0.64
GIN1-201ENST00000399004 BCL11BQ9C0K0 894 aaPredicted RBP11.04□□□□□ -0.64
GIN1-201ENST00000399004 TMEM57Q8N5G2 664 aa11.03□□□□□ -0.64
GIN1-201ENST00000399004 PKD1L3Q7Z443 1732 aa11.03□□□□□ -0.64
GIN1-201ENST00000399004 SOCS7O14512 581 aa11.03□□□□□ -0.64
GIN1-201ENST00000399004 CD2BP2O95400 341 aaKnown RBP11.03□□□□□ -0.64
GIN1-201ENST00000399004 SSFA2P28290 1259 aa11.03□□□□□ -0.64
GIN1-201ENST00000399004 GNAI1P63096 354 aa11.03□□□□□ -0.64
GIN1-201ENST00000399004 LMOD3Q0VAK6 560 aa11.03□□□□□ -0.64
GIN1-201ENST00000399004 RNF214Q8ND24 703 aa11.03□□□□□ -0.64
GIN1-201ENST00000399004 TBX22Q9Y458 520 aa11.03□□□□□ -0.64
GIN1-201ENST00000399004 SOX12O15370 315 aa11.03□□□□□ -0.64
GIN1-201ENST00000399004 IPO8O15397 1037 aaKnown RBP11.03□□□□□ -0.64
GIN1-201ENST00000399004 INTS3Q68E01 1043 aaKnown RBP11.03□□□□□ -0.64
GIN1-201ENST00000399004 PHACTR3Q96KR7 559 aa11.03□□□□□ -0.64
GIN1-201ENST00000399004 CHMP4BQ9H444 224 aaKnown RBP11.03□□□□□ -0.64
GIN1-201ENST00000399004 DTNBO60941 627 aa11.02□□□□□ -0.64
GIN1-201ENST00000399004 MCTP1Q6DN14 999 aa11.02□□□□□ -0.64
GIN1-201ENST00000399004 WAPLQ7Z5K2 1190 aa11.02□□□□□ -0.64
GIN1-201ENST00000399004 ADGRL3Q9HAR2 1447 aa11.02□□□□□ -0.64
GIN1-201ENST00000399004 GLI3P10071 1580 aa11.02□□□□□ -0.65
GIN1-201ENST00000399004 SCN11AQ9UI33 1791 aa11.02□□□□□ -0.65
GIN1-201ENST00000399004 PLCB2Q00722 1185 aa11.02□□□□□ -0.65
GIN1-201ENST00000399004 GCC1Q96CN9 775 aa11.02□□□□□ -0.65
GIN1-201ENST00000399004 CHL1O00533 1208 aa11.01□□□□□ -0.65
GIN1-201ENST00000399004 HMOX1P09601 288 aa11.01□□□□□ -0.65
GIN1-201ENST00000399004 MRE11P49959 708 aa11.01□□□□□ -0.65
GIN1-201ENST00000399004 CAVIN1Q6NZI2 390 aaKnown RBP11.01□□□□□ -0.65
GIN1-201ENST00000399004 R3HCC1Q9Y3T6 440 aaKnown RBP11.01□□□□□ -0.65
GIN1-201ENST00000399004 BMP2KLQ5H9B9 411 aa11.01□□□□□ -0.65
GIN1-201ENST00000399004 KIAA1211Q6ZU35 1233 aa11.01□□□□□ -0.65
GIN1-201ENST00000399004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.01□□□□□ -0.65
GIN1-201ENST00000399004 BABAM1Q9NWV8 329 aa11.01□□□□□ -0.65
GIN1-201ENST00000399004 IGSF1Q8N6C5 1336 aa11.01□□□□□ -0.65
GIN1-201ENST00000399004 MSNP26038 577 aaKnown RBP11.01□□□□□ -0.65
GIN1-201ENST00000399004 CLEC17AQ6ZS10 378 aa11.01□□□□□ -0.65
GIN1-201ENST00000399004 PAPPAQ13219 1627 aa11□□□□□ -0.65
GIN1-201ENST00000399004 HTATSF1O43719 755 aaKnown RBP11□□□□□ -0.65
GIN1-201ENST00000399004 PRKAR2BP31323 418 aa11□□□□□ -0.65
GIN1-201ENST00000399004 MBIPQ9NS73 344 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms