RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 HSP90AB1P08238 724 aaKnown RBP31.86■■■□□ 2.69
COL13A1-203ENST00000398969 CIZ1Q9ULV3 898 aaPredicted RBP31.85■■■□□ 2.69
COL13A1-203ENST00000398969 TTC21BQ7Z4L5 1316 aa31.85■■■□□ 2.69
COL13A1-203ENST00000398969 XRCC6P12956 609 aaKnown RBP eCLIP31.84■■■□□ 2.69
COL13A1-203ENST00000398969 AEBP1Q8IUX7 1158 aa31.83■■■□□ 2.69
COL13A1-203ENST00000398969 USP6P35125 1406 aa31.83■■■□□ 2.69
COL13A1-203ENST00000398969 CDC45O75419 566 aa31.82■■■□□ 2.68
COL13A1-203ENST00000398969 EIF4A2Q14240 407 aaKnown RBP31.82■■■□□ 2.68
COL13A1-203ENST00000398969 INTS3Q68E01 1043 aaKnown RBP31.82■■■□□ 2.68
COL13A1-203ENST00000398969 DCTPP1Q9H773 170 aa31.81■■■□□ 2.68
COL13A1-203ENST00000398969 CD2BP2O95400 341 aaKnown RBP31.8■■■□□ 2.68
COL13A1-203ENST00000398969 ARXQ96QS3 562 aa31.8■■■□□ 2.68
COL13A1-203ENST00000398969 GSPT1P15170 499 aaKnown RBP31.8■■■□□ 2.68
COL13A1-203ENST00000398969 SULT6B1Q6IMI4 303 aa31.8■■■□□ 2.68
COL13A1-203ENST00000398969 TNPO1Q92973 898 aaKnown RBP31.8■■■□□ 2.68
COL13A1-203ENST00000398969 PLEKHM2Q8IWE5 1019 aa31.79■■■□□ 2.68
COL13A1-203ENST00000398969 RGS12O14924 1447 aa31.79■■■□□ 2.68
COL13A1-203ENST00000398969 CHD2O14647 1828 aaKnown RBP31.79■■■□□ 2.68
COL13A1-203ENST00000398969 RAB3GAP1Q15042 981 aa31.78■■■□□ 2.68
COL13A1-203ENST00000398969 RGPD8O14715 1765 aaPredicted RBP31.77■■■□□ 2.68
COL13A1-203ENST00000398969 SSH2Q76I76 1423 aa31.77■■■□□ 2.68
COL13A1-203ENST00000398969 ATP10DQ9P241 1426 aa31.77■■■□□ 2.68
COL13A1-203ENST00000398969 K7ELQ4 463 aaPredicted RBP31.77■■■□□ 2.68
COL13A1-203ENST00000398969 CHL1O00533 1208 aa31.77■■■□□ 2.68
COL13A1-203ENST00000398969 HAP1P54257 671 aaPredicted RBP31.76■■■□□ 2.67
COL13A1-203ENST00000398969 KRT24Q2M2I5 525 aa31.76■■■□□ 2.67
COL13A1-203ENST00000398969 RBM42Q9BTD8 480 aaKnown RBP31.75■■■□□ 2.67
COL13A1-203ENST00000398969 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.75■■■□□ 2.67
COL13A1-203ENST00000398969 OVOS2A0A0J9YW53 1432 aa31.75■■■□□ 2.67
COL13A1-203ENST00000398969 OVOS2Q6IE36 1432 aa31.75■■■□□ 2.67
COL13A1-203ENST00000398969 ANKRD44Q8N8A2 993 aa31.74■■■□□ 2.67
COL13A1-203ENST00000398969 KIAA0232Q92628 1395 aa31.74■■■□□ 2.67
COL13A1-203ENST00000398969 ANKARQ7Z5J8 1434 aa31.74■■■□□ 2.67
COL13A1-203ENST00000398969 TTC22Q5TAA0 569 aa31.73■■■□□ 2.67
COL13A1-203ENST00000398969 HSP90AA1P07900 732 aaKnown RBP31.73■■■□□ 2.67
COL13A1-203ENST00000398969 MCM10Q7L590 875 aa31.73■■■□□ 2.67
COL13A1-203ENST00000398969 GBP4Q96PP9 640 aa31.73■■■□□ 2.67
COL13A1-203ENST00000398969 NGDNQ8NEJ9 315 aaKnown RBP31.72■■■□□ 2.67
COL13A1-203ENST00000398969 PANK2Q9BZ23 570 aa31.72■■■□□ 2.67
COL13A1-203ENST00000398969 NPHP4O75161 1426 aaPredicted RBP31.71■■■□□ 2.67
COL13A1-203ENST00000398969 PEAK1Q9H792 1746 aa31.71■■■□□ 2.67
COL13A1-203ENST00000398969 RPAP2Q8IXW5 612 aaPredicted RBP31.7■■■□□ 2.67
COL13A1-203ENST00000398969 RGPD1P0DJD0 1748 aa31.7■■■□□ 2.67
COL13A1-203ENST00000398969 EIF5BO60841 1220 aaKnown RBP31.7■■■□□ 2.66
COL13A1-203ENST00000398969 MRE11P49959 708 aa31.7■■■□□ 2.66
COL13A1-203ENST00000398969 TTC21AQ8NDW8 1320 aa31.69■■■□□ 2.66
COL13A1-203ENST00000398969 FMN2Q9NZ56 1722 aa31.69■■■□□ 2.66
COL13A1-203ENST00000398969 CEP85Q6P2H3 762 aa31.69■■■□□ 2.66
COL13A1-203ENST00000398969 C16orf71Q8IYS4 520 aaPredicted RBP31.69■■■□□ 2.66
COL13A1-203ENST00000398969 RRAGDQ9NQL2 400 aaPredicted RBP31.69■■■□□ 2.66
COL13A1-203ENST00000398969 FOXD4L1Q9NU39 408 aa31.69■■■□□ 2.66
COL13A1-203ENST00000398969 MSH6P52701 1360 aa31.69■■■□□ 2.66
COL13A1-203ENST00000398969 NALCNQ8IZF0 1738 aa31.69■■■□□ 2.66
COL13A1-203ENST00000398969 PTPRCP08575 1304 aa31.68■■■□□ 2.66
COL13A1-203ENST00000398969 HSP90AB2PQ58FF8 381 aa31.67■■■□□ 2.66
COL13A1-203ENST00000398969 RTL1A6NKG5 1358 aa31.67■■■□□ 2.66
COL13A1-203ENST00000398969 GAS2L2Q8NHY3 880 aa31.66■■■□□ 2.66
COL13A1-203ENST00000398969 ISY1Q9ULR0 285 aaKnown RBP31.66■■■□□ 2.66
COL13A1-203ENST00000398969 CRB1P82279 1406 aa31.66■■■□□ 2.66
COL13A1-203ENST00000398969 USP31Q70CQ4 1352 aa31.65■■■□□ 2.66
COL13A1-203ENST00000398969 OTUD7AQ8TE49 926 aaPredicted RBP31.64■■■□□ 2.66
COL13A1-203ENST00000398969 PTMSP20962 102 aa31.63■■■□□ 2.65
COL13A1-203ENST00000398969 GRPEL1Q9HAV7 217 aa31.63■■■□□ 2.65
COL13A1-203ENST00000398969 RABEP1Q15276 862 aa31.63■■■□□ 2.65
COL13A1-203ENST00000398969 MEIS3Q99687 375 aa31.63■■■□□ 2.65
COL13A1-203ENST00000398969 SKOR2Q2VWA4 1001 aaPredicted RBP31.62■■■□□ 2.65
COL13A1-203ENST00000398969 RBM33Q96EV2 1170 aaKnown RBP31.62■■■□□ 2.65
COL13A1-203ENST00000398969 USP26Q9BXU7 913 aa31.61■■■□□ 2.65
COL13A1-203ENST00000398969 SSFA2P28290 1259 aa31.59■■■□□ 2.65
COL13A1-203ENST00000398969 SLC4A2P04920 1241 aa31.59■■■□□ 2.65
COL13A1-203ENST00000398969 ARHGEF10O15013 1369 aa31.59■■■□□ 2.65
COL13A1-203ENST00000398969 SMARCA5O60264 1052 aaPredicted RBP31.58■■■□□ 2.65
COL13A1-203ENST00000398969 SDSP20132 328 aa31.58■■■□□ 2.65
COL13A1-203ENST00000398969 CLEC17AQ6ZS10 378 aa31.57■■■□□ 2.64
COL13A1-203ENST00000398969 ADGRL3Q9HAR2 1447 aa31.57■■■□□ 2.64
COL13A1-203ENST00000398969 MAP3K19Q56UN5 1328 aa31.56■■■□□ 2.64
COL13A1-203ENST00000398969 APBB1O00213 710 aa31.55■■■□□ 2.64
COL13A1-203ENST00000398969 MIS18AQ9NYP9 233 aa31.55■■■□□ 2.64
COL13A1-203ENST00000398969 PIK3C2AO00443 1686 aa31.55■■■□□ 2.64
COL13A1-203ENST00000398969 SOX12O15370 315 aa31.55■■■□□ 2.64
COL13A1-203ENST00000398969 FOXO3O43524 673 aa31.54■■■□□ 2.64
COL13A1-203ENST00000398969 MTHFSDQ2M296 383 aaKnown RBP31.53■■■□□ 2.64
COL13A1-203ENST00000398969 CASC1Q6TDU7 716 aa31.53■■■□□ 2.64
COL13A1-203ENST00000398969 GAS2L3Q86XJ1 694 aa31.52■■■□□ 2.64
COL13A1-203ENST00000398969 PHF8Q9UPP1 1060 aa31.52■■■□□ 2.64
COL13A1-203ENST00000398969 G2E3Q7L622 706 aa31.51■■■□□ 2.64
COL13A1-203ENST00000398969 TSPYL4Q9UJ04 414 aa31.51■■■□□ 2.64
COL13A1-203ENST00000398969 HMMRO75330 724 aa31.51■■■□□ 2.63
COL13A1-203ENST00000398969 RTF1Q92541 710 aaKnown RBP31.5■■■□□ 2.63
COL13A1-203ENST00000398969 NLRP6P59044 892 aa31.5■■■□□ 2.63
COL13A1-203ENST00000398969 GOLGA6L22H0YM25 854 aa31.49■■■□□ 2.63
COL13A1-203ENST00000398969 SBNO1A3KN83 1393 aa31.49■■■□□ 2.63
COL13A1-203ENST00000398969 FLT4P35916 1363 aa31.49■■■□□ 2.63
COL13A1-203ENST00000398969 KDRP35968 1356 aa31.49■■■□□ 2.63
COL13A1-203ENST00000398969 NWD1Q149M9 1564 aa31.49■■■□□ 2.63
COL13A1-203ENST00000398969 BAG4O95429 457 aaKnown RBP31.49■■■□□ 2.63
COL13A1-203ENST00000398969 CCT4P50991 539 aaKnown RBP31.49■■■□□ 2.63
COL13A1-203ENST00000398969 F6X3S4 739 aa31.47■■■□□ 2.63
COL13A1-203ENST00000398969 SLC4A10Q6U841 1118 aa31.47■■■□□ 2.63
COL13A1-203ENST00000398969 C14orf37Q86TY3 774 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms