RNA–Protein interactions for RNA: ENST00000398795.6

TNFSF11-203, Transcript of TNF superfamily member 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF11, Length 2,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-203ENST00000398795 ARXQ96QS3 562 aa24.35■■□□□ 1.49
TNFSF11-203ENST00000398795 TTC21BQ7Z4L5 1316 aa24.35■■□□□ 1.49
TNFSF11-203ENST00000398795 AEBP1Q8IUX7 1158 aa24.35■■□□□ 1.49
TNFSF11-203ENST00000398795 CEP85Q6P2H3 762 aa24.34■■□□□ 1.49
TNFSF11-203ENST00000398795 RBM42Q9BTD8 480 aaKnown RBP24.34■■□□□ 1.49
TNFSF11-203ENST00000398795 GAS2L2Q8NHY3 880 aa24.33■■□□□ 1.48
TNFSF11-203ENST00000398795 RTL1A6NKG5 1358 aa24.32■■□□□ 1.48
TNFSF11-203ENST00000398795 MLECQ14165 292 aa24.32■■□□□ 1.48
TNFSF11-203ENST00000398795 PLEKHG3A1L390 1219 aa24.31■■□□□ 1.48
TNFSF11-203ENST00000398795 USP31Q70CQ4 1352 aa24.31■■□□□ 1.48
TNFSF11-203ENST00000398795 ROBO2Q9HCK4 1378 aa24.31■■□□□ 1.48
TNFSF11-203ENST00000398795 USP26Q9BXU7 913 aa24.3■■□□□ 1.48
TNFSF11-203ENST00000398795 MSH6P52701 1360 aa24.3■■□□□ 1.48
TNFSF11-203ENST00000398795 CRB1P82279 1406 aa24.3■■□□□ 1.48
TNFSF11-203ENST00000398795 GOLGA6L22H0YM25 854 aa24.3■■□□□ 1.48
TNFSF11-203ENST00000398795 TMEM2Q9UHN6 1383 aa24.3■■□□□ 1.48
TNFSF11-203ENST00000398795 CASC1Q6TDU7 716 aa24.29■■□□□ 1.48
TNFSF11-203ENST00000398795 CLCN1P35523 988 aa24.29■■□□□ 1.48
TNFSF11-203ENST00000398795 USP6P35125 1406 aa24.28■■□□□ 1.48
TNFSF11-203ENST00000398795 RGPD1P0DJD0 1748 aa24.28■■□□□ 1.48
TNFSF11-203ENST00000398795 KRT24Q2M2I5 525 aa24.28■■□□□ 1.48
TNFSF11-203ENST00000398795 MCM10Q7L590 875 aa24.28■■□□□ 1.48
TNFSF11-203ENST00000398795 ESF1Q9H501 851 aaKnown RBP24.28■■□□□ 1.48
TNFSF11-203ENST00000398795 TNRQ92752 1358 aa24.28■■□□□ 1.48
TNFSF11-203ENST00000398795 C16orf71Q8IYS4 520 aaPredicted RBP24.27■■□□□ 1.48
TNFSF11-203ENST00000398795 FOXD4L1Q9NU39 408 aa24.27■■□□□ 1.48
TNFSF11-203ENST00000398795 TOPAZ1Q8N9V7 1692 aa24.27■■□□□ 1.48
TNFSF11-203ENST00000398795 ACEP12821 1306 aa24.27■■□□□ 1.48
TNFSF11-203ENST00000398795 ARHGEF10O15013 1369 aa24.27■■□□□ 1.48
TNFSF11-203ENST00000398795 SSFA2P28290 1259 aa24.27■■□□□ 1.48
TNFSF11-203ENST00000398795 ADAMTS13Q76LX8 1427 aa24.26■■□□□ 1.47
TNFSF11-203ENST00000398795 IBTKQ9P2D0 1353 aaPredicted RBP24.26■■□□□ 1.47
TNFSF11-203ENST00000398795 SDSP20132 328 aa24.26■■□□□ 1.47
TNFSF11-203ENST00000398795 NALCNQ8IZF0 1738 aa24.26■■□□□ 1.47
TNFSF11-203ENST00000398795 HMMRO75330 724 aa24.25■■□□□ 1.47
TNFSF11-203ENST00000398795 NUCB2P80303 420 aa24.25■■□□□ 1.47
TNFSF11-203ENST00000398795 MEIS3Q99687 375 aa24.25■■□□□ 1.47
TNFSF11-203ENST00000398795 OTUD7AQ8TE49 926 aaPredicted RBP24.24■■□□□ 1.47
TNFSF11-203ENST00000398795 KLHL40Q2TBA0 621 aa24.23■■□□□ 1.47
TNFSF11-203ENST00000398795 HSP90AB2PQ58FF8 381 aa24.23■■□□□ 1.47
TNFSF11-203ENST00000398795 GAS2L3Q86XJ1 694 aa24.23■■□□□ 1.47
TNFSF11-203ENST00000398795 SSH2Q76I76 1423 aa24.23■■□□□ 1.47
TNFSF11-203ENST00000398795 PEAK1Q9H792 1746 aa24.23■■□□□ 1.47
TNFSF11-203ENST00000398795 REC8O95072 547 aa24.23■■□□□ 1.47
TNFSF11-203ENST00000398795 BAG4O95429 457 aaKnown RBP24.23■■□□□ 1.47
TNFSF11-203ENST00000398795 OSBPL3Q9H4L5 887 aa24.23■■□□□ 1.47
TNFSF11-203ENST00000398795 CWC22Q9HCG8 908 aaKnown RBP24.22■■□□□ 1.47
TNFSF11-203ENST00000398795 TSPOAP1O95153 1857 aa24.22■■□□□ 1.47
TNFSF11-203ENST00000398795 SLC4A2P04920 1241 aa24.22■■□□□ 1.47
TNFSF11-203ENST00000398795 CCT4P50991 539 aaKnown RBP24.22■■□□□ 1.47
TNFSF11-203ENST00000398795 CYP2E1P05181 493 aaPredicted RBP24.21■■□□□ 1.47
TNFSF11-203ENST00000398795 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.2■■□□□ 1.47
TNFSF11-203ENST00000398795 PLEKHG1Q9ULL1 1385 aa24.2■■□□□ 1.46
TNFSF11-203ENST00000398795 TTC21AQ8NDW8 1320 aa24.2■■□□□ 1.46
TNFSF11-203ENST00000398795 ST18O60284 1047 aa24.2■■□□□ 1.46
TNFSF11-203ENST00000398795 KDRP35968 1356 aa24.19■■□□□ 1.46
TNFSF11-203ENST00000398795 SMARCA5O60264 1052 aaPredicted RBP24.19■■□□□ 1.46
TNFSF11-203ENST00000398795 UBR1Q8IWV7 1749 aa24.19■■□□□ 1.46
TNFSF11-203ENST00000398795 MAP3K19Q56UN5 1328 aa24.18■■□□□ 1.46
TNFSF11-203ENST00000398795 RTF1Q92541 710 aaKnown RBP24.18■■□□□ 1.46
TNFSF11-203ENST00000398795 ERC2O15083 957 aa24.17■■□□□ 1.46
TNFSF11-203ENST00000398795 TSPYL4Q9UJ04 414 aa24.17■■□□□ 1.46
TNFSF11-203ENST00000398795 SBNO1A3KN83 1393 aa24.17■■□□□ 1.46
TNFSF11-203ENST00000398795 FLT4P35916 1363 aa24.17■■□□□ 1.46
TNFSF11-203ENST00000398795 MTHFSDQ2M296 383 aaKnown RBP24.16■■□□□ 1.46
TNFSF11-203ENST00000398795 DDX49Q9Y6V7 483 aaKnown RBP24.16■■□□□ 1.46
TNFSF11-203ENST00000398795 ESPNB1AK53 854 aa24.15■■□□□ 1.46
TNFSF11-203ENST00000398795 HTATSF1O43719 755 aaKnown RBP24.14■■□□□ 1.45
TNFSF11-203ENST00000398795 PDE1AP54750 535 aa24.14■■□□□ 1.45
TNFSF11-203ENST00000398795 TRIM44Q96DX7 344 aaPredicted RBP24.14■■□□□ 1.45
TNFSF11-203ENST00000398795 GNAI2P04899 355 aa24.13■■□□□ 1.45
TNFSF11-203ENST00000398795 APBB1O00213 710 aa24.13■■□□□ 1.45
TNFSF11-203ENST00000398795 IGSF1Q8N6C5 1336 aa24.13■■□□□ 1.45
TNFSF11-203ENST00000398795 ZNF445P59923 1031 aa24.12■■□□□ 1.45
TNFSF11-203ENST00000398795 G2E3Q7L622 706 aa24.12■■□□□ 1.45
TNFSF11-203ENST00000398795 CCDC173Q0VFZ6 552 aa24.12■■□□□ 1.45
TNFSF11-203ENST00000398795 PTPRUQ92729 1446 aa24.11■■□□□ 1.45
TNFSF11-203ENST00000398795 FOXO3O43524 673 aa24.11■■□□□ 1.45
TNFSF11-203ENST00000398795 MIS18AQ9NYP9 233 aa24.11■■□□□ 1.45
TNFSF11-203ENST00000398795 SOS1Q07889 1333 aaPredicted RBP24.11■■□□□ 1.45
TNFSF11-203ENST00000398795 SLC4A10Q6U841 1118 aa24.1■■□□□ 1.45
TNFSF11-203ENST00000398795 PPP1R9BQ96SB3 815 aa24.1■■□□□ 1.45
TNFSF11-203ENST00000398795 STK31Q9BXU1 1019 aa24.1■■□□□ 1.45
TNFSF11-203ENST00000398795 SALL3Q9BXA9 1300 aa24.1■■□□□ 1.45
TNFSF11-203ENST00000398795 MCTP1Q6DN14 999 aa24.1■■□□□ 1.45
TNFSF11-203ENST00000398795 LMBRD1Q9NUN5 540 aa24.1■■□□□ 1.45
TNFSF11-203ENST00000398795 F6X3S4 739 aa24.09■■□□□ 1.45
TNFSF11-203ENST00000398795 NASPP49321 788 aaPredicted RBP24.09■■□□□ 1.45
TNFSF11-203ENST00000398795 GNAI3P08754 354 aa24.09■■□□□ 1.45
TNFSF11-203ENST00000398795 NUTM2FA1L443 756 aa24.08■■□□□ 1.45
TNFSF11-203ENST00000398795 LTKP29376 864 aa24.08■■□□□ 1.45
TNFSF11-203ENST00000398795 MCM2P49736 904 aa24.08■■□□□ 1.44
TNFSF11-203ENST00000398795 ERBB4Q15303 1308 aa24.08■■□□□ 1.44
TNFSF11-203ENST00000398795 EYA1Q99502 592 aa24.07■■□□□ 1.44
TNFSF11-203ENST00000398795 LRRC37A3O60309 1634 aa24.07■■□□□ 1.44
TNFSF11-203ENST00000398795 FMN2Q9NZ56 1722 aa24.07■■□□□ 1.44
TNFSF11-203ENST00000398795 CCDC30Q5VVM6 783 aa24.06■■□□□ 1.44
TNFSF11-203ENST00000398795 LRRCC1Q9C099 1032 aa24.06■■□□□ 1.44
TNFSF11-203ENST00000398795 CEP170BQ9Y4F5 1589 aaPredicted RBP24.06■■□□□ 1.44
TNFSF11-203ENST00000398795 ZGPATQ8N5A5 531 aaKnown RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms