RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 RIMS2Q9UQ26 1411 aa17.01■□□□□ 0.31
PCDHGA11-201ENST00000398587 WDR33Q9C0J8 1336 aaKnown RBP17.01■□□□□ 0.31
PCDHGA11-201ENST00000398587 F6X3S4 739 aa17.01■□□□□ 0.31
PCDHGA11-201ENST00000398587 GLRX3O76003 335 aaKnown RBP17.01■□□□□ 0.31
PCDHGA11-201ENST00000398587 XBP1P17861 261 aa17■□□□□ 0.31
PCDHGA11-201ENST00000398587 PIK3C2GO75747 1445 aa17■□□□□ 0.31
PCDHGA11-201ENST00000398587 LETM1O95202 739 aaPredicted RBP17■□□□□ 0.31
PCDHGA11-201ENST00000398587 ANKRD20A12PQ8NF67 263 aa17■□□□□ 0.31
PCDHGA11-201ENST00000398587 SDF4Q9BRK5 362 aa17■□□□□ 0.31
PCDHGA11-201ENST00000398587 DBF4Q9UBU7 674 aaPredicted RBP17■□□□□ 0.31
PCDHGA11-201ENST00000398587 FLIIQ13045 1269 aa17■□□□□ 0.31
PCDHGA11-201ENST00000398587 AEBP1Q8IUX7 1158 aa17■□□□□ 0.31
PCDHGA11-201ENST00000398587 ZBTB4Q9P1Z0 1013 aaPredicted RBP17■□□□□ 0.31
PCDHGA11-201ENST00000398587 TPM2P07951 284 aa17■□□□□ 0.31
PCDHGA11-201ENST00000398587 BLOC1S2Q6QNY1 142 aa17■□□□□ 0.31
PCDHGA11-201ENST00000398587 DNAAF4Q8WXU2 420 aa17■□□□□ 0.31
PCDHGA11-201ENST00000398587 ARHGAP45Q92619 1136 aa17■□□□□ 0.31
PCDHGA11-201ENST00000398587 MPRIPQ6WCQ1 1025 aa16.99■□□□□ 0.31
PCDHGA11-201ENST00000398587 GNL3LQ9NVN8 582 aaKnown RBP16.99■□□□□ 0.31
PCDHGA11-201ENST00000398587 RAD21O60216 631 aa16.99■□□□□ 0.31
PCDHGA11-201ENST00000398587 CWC27Q6UX04 472 aaKnown RBP16.99■□□□□ 0.31
PCDHGA11-201ENST00000398587 FIBPO43427 364 aa16.98■□□□□ 0.31
PCDHGA11-201ENST00000398587 FBLN1P23142 703 aa16.98■□□□□ 0.31
PCDHGA11-201ENST00000398587 FBXW7Q969H0 707 aa16.98■□□□□ 0.31
PCDHGA11-201ENST00000398587 NUTM1Q86Y26 1132 aa16.98■□□□□ 0.31
PCDHGA11-201ENST00000398587 ARID3AQ99856 593 aa16.98■□□□□ 0.31
PCDHGA11-201ENST00000398587 FAM83GA6ND36 823 aa16.98■□□□□ 0.31
PCDHGA11-201ENST00000398587 CARD14Q9BXL6 1004 aa16.98■□□□□ 0.31
PCDHGA11-201ENST00000398587 MCM4P33991 863 aa16.98■□□□□ 0.31
PCDHGA11-201ENST00000398587 RNF214Q8ND24 703 aa16.98■□□□□ 0.31
PCDHGA11-201ENST00000398587 MPHOSPH8Q99549 860 aa16.98■□□□□ 0.31
PCDHGA11-201ENST00000398587 BRMS1Q9HCU9 246 aa16.98■□□□□ 0.31
PCDHGA11-201ENST00000398587 COL17A1Q9UMD9 1497 aaPredicted RBP16.97■□□□□ 0.31
PCDHGA11-201ENST00000398587 SMARCA5O60264 1052 aaPredicted RBP16.97■□□□□ 0.31
PCDHGA11-201ENST00000398587 STARD3NLO95772 234 aa16.97■□□□□ 0.31
PCDHGA11-201ENST00000398587 HSP90AB2PQ58FF8 381 aa16.97■□□□□ 0.31
PCDHGA11-201ENST00000398587 ZSCAN25Q6NSZ9 544 aa16.97■□□□□ 0.31
PCDHGA11-201ENST00000398587 ZSCAN31Q96LW9 406 aaPredicted RBP16.97■□□□□ 0.31
PCDHGA11-201ENST00000398587 KRT32Q14532 448 aa16.97■□□□□ 0.31
PCDHGA11-201ENST00000398587 KRT28Q7Z3Y7 464 aa16.97■□□□□ 0.31
PCDHGA11-201ENST00000398587 PPIP5K1Q6PFW1 1433 aa16.97■□□□□ 0.31
PCDHGA11-201ENST00000398587 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.96■□□□□ 0.31
PCDHGA11-201ENST00000398587 HYPKQ9NX55 129 aa16.96■□□□□ 0.31
PCDHGA11-201ENST00000398587 POLKQ9UBT6 870 aa16.96■□□□□ 0.31
PCDHGA11-201ENST00000398587 PTCD1O75127 700 aaKnown RBP16.96■□□□□ 0.31
PCDHGA11-201ENST00000398587 NAT10Q9H0A0 1025 aaKnown RBP16.96■□□□□ 0.31
PCDHGA11-201ENST00000398587 LRRFIP2Q9Y608 721 aaKnown RBP16.96■□□□□ 0.31
PCDHGA11-201ENST00000398587 KINO60870 393 aaKnown RBP16.95■□□□□ 0.3
PCDHGA11-201ENST00000398587 IGHDP01880 384 aa16.95■□□□□ 0.3
PCDHGA11-201ENST00000398587 FAM43AQ8N2R8 423 aa16.95■□□□□ 0.3
PCDHGA11-201ENST00000398587 JAKMIP1Q96N16 626 aaKnown RBP16.95■□□□□ 0.3
PCDHGA11-201ENST00000398587 ZNF396Q96N95 335 aaPredicted RBP16.95■□□□□ 0.3
PCDHGA11-201ENST00000398587 NACAP1Q9BZK3 213 aa16.95■□□□□ 0.3
PCDHGA11-201ENST00000398587 NUTM2BA6NNL0 878 aaPredicted RBP16.95■□□□□ 0.3
PCDHGA11-201ENST00000398587 NUTM2EB1AL46 878 aaPredicted RBP16.95■□□□□ 0.3
PCDHGA11-201ENST00000398587 FKBP4Q02790 459 aaKnown RBP eCLIP16.95■□□□□ 0.3
PCDHGA11-201ENST00000398587 BMP2KLQ5H9B9 411 aa16.95■□□□□ 0.3
PCDHGA11-201ENST00000398587 NUTM2AQ8IVF1 878 aaPredicted RBP16.95■□□□□ 0.3
PCDHGA11-201ENST00000398587 CTNNA3Q9UI47 895 aa16.95■□□□□ 0.3
PCDHGA11-201ENST00000398587 PDRG1Q9NUG6 133 aa16.94■□□□□ 0.3
PCDHGA11-201ENST00000398587 NPC1L1Q9UHC9 1359 aa16.94■□□□□ 0.3
PCDHGA11-201ENST00000398587 SLC3A2P08195 630 aaKnown RBP16.94■□□□□ 0.3
PCDHGA11-201ENST00000398587 HDAC1Q13547 482 aaPredicted RBP16.94■□□□□ 0.3
PCDHGA11-201ENST00000398587 PDIA4P13667 645 aaKnown RBP16.93■□□□□ 0.3
PCDHGA11-201ENST00000398587 LARP1BQ659C4 914 aaKnown RBP16.93■□□□□ 0.3
PCDHGA11-201ENST00000398587 IPO7O95373 1038 aaKnown RBP16.93■□□□□ 0.3
PCDHGA11-201ENST00000398587 KRT85P78386 507 aa16.93■□□□□ 0.3
PCDHGA11-201ENST00000398587 RRP12Q5JTH9 1297 aaKnown RBP16.93■□□□□ 0.3
PCDHGA11-201ENST00000398587 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.93■□□□□ 0.3
PCDHGA11-201ENST00000398587 TSPY26PQ9H489 355 aa16.93■□□□□ 0.3
PCDHGA11-201ENST00000398587 MAGI3Q5TCQ9 1506 aa16.93■□□□□ 0.3
PCDHGA11-201ENST00000398587 TMOD3Q9NYL9 352 aa16.93■□□□□ 0.3
PCDHGA11-201ENST00000398587 MYD88Q99836 296 aa16.92■□□□□ 0.3
PCDHGA11-201ENST00000398587 CADPS2Q86UW7 1296 aa16.92■□□□□ 0.3
PCDHGA11-201ENST00000398587 CCDC39Q9UFE4 941 aa16.92■□□□□ 0.3
PCDHGA11-201ENST00000398587 FMNL2Q96PY5 1086 aa16.92■□□□□ 0.3
PCDHGA11-201ENST00000398587 MAST1Q9Y2H9 1570 aa16.92■□□□□ 0.3
PCDHGA11-201ENST00000398587 STK3Q13188 491 aa16.92■□□□□ 0.3
PCDHGA11-201ENST00000398587 STK38Q15208 465 aa16.92■□□□□ 0.3
PCDHGA11-201ENST00000398587 ATP7AQ04656 1500 aa16.91■□□□□ 0.3
PCDHGA11-201ENST00000398587 NOC3LQ8WTT2 800 aaKnown RBP16.91■□□□□ 0.3
PCDHGA11-201ENST00000398587 TARBP1Q13395 1621 aaKnown RBP16.91■□□□□ 0.3
PCDHGA11-201ENST00000398587 PIK3R4Q99570 1358 aa16.91■□□□□ 0.3
PCDHGA11-201ENST00000398587 CEP170Q5SW79 1584 aa16.91■□□□□ 0.3
PCDHGA11-201ENST00000398587 IFNL2Q8IZJ0 200 aa16.91■□□□□ 0.3
PCDHGA11-201ENST00000398587 PCDHB15Q9Y5E8 787 aa16.91■□□□□ 0.3
PCDHGA11-201ENST00000398587 PLEKHH1Q9ULM0 1364 aa16.91■□□□□ 0.3
PCDHGA11-201ENST00000398587 OLFM4Q6UX06 510 aa16.9■□□□□ 0.3
PCDHGA11-201ENST00000398587 JMYQ8N9B5 988 aa16.9■□□□□ 0.3
PCDHGA11-201ENST00000398587 ZNF592Q92610 1267 aa16.9■□□□□ 0.3
PCDHGA11-201ENST00000398587 NPATQ14207 1427 aa16.9■□□□□ 0.3
PCDHGA11-201ENST00000398587 EIF4A2Q14240 407 aaKnown RBP16.9■□□□□ 0.3
PCDHGA11-201ENST00000398587 A0A1W2PP64 1363 aa16.9■□□□□ 0.3
PCDHGA11-201ENST00000398587 ANKRD24Q8TF21 1146 aa16.9■□□□□ 0.3
PCDHGA11-201ENST00000398587 YTHDC2Q9H6S0 1430 aaKnown RBP16.89■□□□□ 0.29
PCDHGA11-201ENST00000398587 AKAP2Q9Y2D5 859 aa16.89■□□□□ 0.29
PCDHGA11-201ENST00000398587 CTDP1Q9Y5B0 961 aaPredicted RBP16.89■□□□□ 0.29
PCDHGA11-201ENST00000398587 UPF3BQ9BZI7 483 aaKnown RBP16.89■□□□□ 0.29
PCDHGA11-201ENST00000398587 PCMTD1Q96MG8 357 aaPredicted RBP16.89■□□□□ 0.29
PCDHGA11-201ENST00000398587 ZFYVE9O95405 1425 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms