RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 TTC21BQ7Z4L5 1316 aa16.56■□□□□ 0.24
TRIM40-207ENST00000396581 NFE2L2Q16236 605 aa16.56■□□□□ 0.24
TRIM40-207ENST00000396581 POLKQ9UBT6 870 aa16.56■□□□□ 0.24
TRIM40-207ENST00000396581 AATKQ6ZMQ8 1374 aa16.56■□□□□ 0.24
TRIM40-207ENST00000396581 PRKAR2BP31323 418 aa16.55■□□□□ 0.24
TRIM40-207ENST00000396581 COG3Q96JB2 828 aa16.55■□□□□ 0.24
TRIM40-207ENST00000396581 IFT57Q9NWB7 429 aa16.55■□□□□ 0.24
TRIM40-207ENST00000396581 ERBB4Q15303 1308 aa16.54■□□□□ 0.24
TRIM40-207ENST00000396581 KDM4FA0A1W2PPD8 638 aa16.54■□□□□ 0.24
TRIM40-207ENST00000396581 ZRANB1Q9UGI0 708 aa16.54■□□□□ 0.24
TRIM40-207ENST00000396581 NRKQ7Z2Y5 1582 aa16.53■□□□□ 0.24
TRIM40-207ENST00000396581 GNAI1P63096 354 aa16.53■□□□□ 0.24
TRIM40-207ENST00000396581 CFAP44Q96MT7 982 aa16.53■□□□□ 0.24
TRIM40-207ENST00000396581 ADGRL3Q9HAR2 1447 aa16.53■□□□□ 0.24
TRIM40-207ENST00000396581 CDC45O75419 566 aa16.52■□□□□ 0.24
TRIM40-207ENST00000396581 FMN2Q9NZ56 1722 aa16.52■□□□□ 0.23
TRIM40-207ENST00000396581 FBLN1P23142 703 aa16.52■□□□□ 0.23
TRIM40-207ENST00000396581 TSPYL6Q8N831 410 aa16.52■□□□□ 0.23
TRIM40-207ENST00000396581 NGDNQ8NEJ9 315 aaKnown RBP16.52■□□□□ 0.23
TRIM40-207ENST00000396581 NWD1Q149M9 1564 aa16.51■□□□□ 0.23
TRIM40-207ENST00000396581 TTC21AQ8NDW8 1320 aa16.51■□□□□ 0.23
TRIM40-207ENST00000396581 GAS2L2Q8NHY3 880 aa16.51■□□□□ 0.23
TRIM40-207ENST00000396581 PHACTR3Q96KR7 559 aa16.51■□□□□ 0.23
TRIM40-207ENST00000396581 NAP1L5Q96NT1 182 aaPredicted RBP16.51■□□□□ 0.23
TRIM40-207ENST00000396581 PPP1R9BQ96SB3 815 aa16.51■□□□□ 0.23
TRIM40-207ENST00000396581 KLHL40Q2TBA0 621 aa16.5■□□□□ 0.23
TRIM40-207ENST00000396581 NALCNQ8IZF0 1738 aa16.5■□□□□ 0.23
TRIM40-207ENST00000396581 RGPD8O14715 1765 aaPredicted RBP16.5■□□□□ 0.23
TRIM40-207ENST00000396581 CDK12Q9NYV4 1490 aaPredicted RBP16.5■□□□□ 0.23
TRIM40-207ENST00000396581 GSPT1P15170 499 aaKnown RBP16.5■□□□□ 0.23
TRIM40-207ENST00000396581 RBM33Q96EV2 1170 aaKnown RBP16.5■□□□□ 0.23
TRIM40-207ENST00000396581 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
TRIM40-207ENST00000396581 C1orf115Q9H7X2 142 aa16.5■□□□□ 0.23
TRIM40-207ENST00000396581 OVOS2A0A0J9YW53 1432 aa16.49■□□□□ 0.23
TRIM40-207ENST00000396581 OVOS2Q6IE36 1432 aa16.49■□□□□ 0.23
TRIM40-207ENST00000396581 API5Q9BZZ5 524 aaKnown RBP16.49■□□□□ 0.23
TRIM40-207ENST00000396581 MBIPQ9NS73 344 aa16.49■□□□□ 0.23
TRIM40-207ENST00000396581 SSFA2P28290 1259 aa16.49■□□□□ 0.23
TRIM40-207ENST00000396581 IL13P35225 146 aa16.49■□□□□ 0.23
TRIM40-207ENST00000396581 RABEP1Q15276 862 aa16.49■□□□□ 0.23
TRIM40-207ENST00000396581 PLEKHM2Q8IWE5 1019 aa16.49■□□□□ 0.23
TRIM40-207ENST00000396581 DCTPP1Q9H773 170 aa16.49■□□□□ 0.23
TRIM40-207ENST00000396581 MAP2P11137 1827 aaKnown RBP16.48■□□□□ 0.23
TRIM40-207ENST00000396581 CYP2E1P05181 493 aaPredicted RBP16.48■□□□□ 0.23
TRIM40-207ENST00000396581 HSP90AA1P07900 732 aaKnown RBP16.48■□□□□ 0.23
TRIM40-207ENST00000396581 CCDC173Q0VFZ6 552 aa16.48■□□□□ 0.23
TRIM40-207ENST00000396581 TRIM44Q96DX7 344 aaPredicted RBP16.48■□□□□ 0.23
TRIM40-207ENST00000396581 EMILIN1Q9Y6C2 1016 aa16.48■□□□□ 0.23
TRIM40-207ENST00000396581 USP31Q70CQ4 1352 aa16.48■□□□□ 0.23
TRIM40-207ENST00000396581 GOLGA6L22H0YM25 854 aa16.47■□□□□ 0.23
TRIM40-207ENST00000396581 BAG4O95429 457 aaKnown RBP16.47■□□□□ 0.23
TRIM40-207ENST00000396581 TWISTNBQ3B726 338 aaPredicted RBP16.47■□□□□ 0.23
TRIM40-207ENST00000396581 RRP9O43818 475 aaKnown RBP16.47■□□□□ 0.23
TRIM40-207ENST00000396581 HSPA2P54652 639 aa16.46■□□□□ 0.23
TRIM40-207ENST00000396581 LMOD3Q0VAK6 560 aa16.46■□□□□ 0.23
TRIM40-207ENST00000396581 PROSER2Q86WR7 435 aaPredicted RBP16.46■□□□□ 0.23
TRIM40-207ENST00000396581 THUMPD2Q9BTF0 503 aaKnown RBP16.46■□□□□ 0.23
TRIM40-207ENST00000396581 PHF8Q9UPP1 1060 aa16.46■□□□□ 0.23
TRIM40-207ENST00000396581 ZNF445P59923 1031 aa16.46■□□□□ 0.22
TRIM40-207ENST00000396581 TTC22Q5TAA0 569 aa16.46■□□□□ 0.22
TRIM40-207ENST00000396581 RRS1Q15050 365 aaKnown RBP16.45■□□□□ 0.22
TRIM40-207ENST00000396581 INTS3Q68E01 1043 aaKnown RBP16.45■□□□□ 0.22
TRIM40-207ENST00000396581 ATP10DQ9P241 1426 aa16.44■□□□□ 0.22
TRIM40-207ENST00000396581 NUCB2P80303 420 aa16.44■□□□□ 0.22
TRIM40-207ENST00000396581 C14orf37Q86TY3 774 aa16.44■□□□□ 0.22
TRIM40-207ENST00000396581 C8orf58Q8NAV2 365 aa16.44■□□□□ 0.22
TRIM40-207ENST00000396581 USP26Q9BXU7 913 aa16.44■□□□□ 0.22
TRIM40-207ENST00000396581 FOXD4L1Q9NU39 408 aa16.44■□□□□ 0.22
TRIM40-207ENST00000396581 DLG5Q8TDM6 1919 aa16.44■□□□□ 0.22
TRIM40-207ENST00000396581 LMTK3Q96Q04 1460 aa16.44■□□□□ 0.22
TRIM40-207ENST00000396581 HMOX1P09601 288 aa16.44■□□□□ 0.22
TRIM40-207ENST00000396581 C19orf44Q9H6X5 657 aa16.44■□□□□ 0.22
TRIM40-207ENST00000396581 NASPP49321 788 aaPredicted RBP16.43■□□□□ 0.22
TRIM40-207ENST00000396581 RGS12O14924 1447 aa16.43■□□□□ 0.22
TRIM40-207ENST00000396581 ANKRD44Q8N8A2 993 aa16.42■□□□□ 0.22
TRIM40-207ENST00000396581 CWC22Q9HCG8 908 aaKnown RBP16.42■□□□□ 0.22
TRIM40-207ENST00000396581 DDX49Q9Y6V7 483 aaKnown RBP16.42■□□□□ 0.22
TRIM40-207ENST00000396581 TPM2P07951 284 aa16.41■□□□□ 0.22
TRIM40-207ENST00000396581 ESCO1Q5FWF5 840 aa16.41■□□□□ 0.22
TRIM40-207ENST00000396581 ZSCAN30Q86W11 494 aa16.41■□□□□ 0.22
TRIM40-207ENST00000396581 RPAP2Q8IXW5 612 aaPredicted RBP16.41■□□□□ 0.22
TRIM40-207ENST00000396581 LMBRD1Q9NUN5 540 aa16.41■□□□□ 0.22
TRIM40-207ENST00000396581 HS1BP3Q53T59 392 aa16.4■□□□□ 0.22
TRIM40-207ENST00000396581 ELL2O00472 640 aaPredicted RBP16.39■□□□□ 0.21
TRIM40-207ENST00000396581 NLRP6P59044 892 aa16.39■□□□□ 0.21
TRIM40-207ENST00000396581 HSP90AA2PQ14568 343 aaPredicted RBP16.39■□□□□ 0.21
TRIM40-207ENST00000396581 PIK3C2AO00443 1686 aa16.39■□□□□ 0.21
TRIM40-207ENST00000396581 GLIPR1L2Q4G1C9 344 aa16.39■□□□□ 0.21
TRIM40-207ENST00000396581 ABTB2Q8N961 1025 aa16.38■□□□□ 0.21
TRIM40-207ENST00000396581 TMEM94Q12767 1356 aa16.38■□□□□ 0.21
TRIM40-207ENST00000396581 HAP1P54257 671 aaPredicted RBP16.38■□□□□ 0.21
TRIM40-207ENST00000396581 CEP85Q6P2H3 762 aa16.38■□□□□ 0.21
TRIM40-207ENST00000396581 ORAI2Q96SN7 254 aa16.38■□□□□ 0.21
TRIM40-207ENST00000396581 KIAA0232Q92628 1395 aa16.37■□□□□ 0.21
TRIM40-207ENST00000396581 TERF1P54274 439 aa16.37■□□□□ 0.21
TRIM40-207ENST00000396581 PSME1Q06323 249 aa16.37■□□□□ 0.21
TRIM40-207ENST00000396581 PDLIM2Q96JY6 352 aa16.37■□□□□ 0.21
TRIM40-207ENST00000396581 MAP3K19Q56UN5 1328 aa16.37■□□□□ 0.21
TRIM40-207ENST00000396581 RTL1A6NKG5 1358 aa16.36■□□□□ 0.21
TRIM40-207ENST00000396581 SDSP20132 328 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms