RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 KLHL40Q2TBA0 621 aa12.14□□□□□ -0.47
TRIM39-203ENST00000396547 STAG3Q9UJ98 1225 aa12.14□□□□□ -0.47
TRIM39-203ENST00000396547 BMP2KLQ5H9B9 411 aa12.14□□□□□ -0.47
TRIM39-203ENST00000396547 DNTTIP2Q5QJE6 756 aaKnown RBP12.14□□□□□ -0.47
TRIM39-203ENST00000396547 AHDC1Q5TGY3 1603 aaPredicted RBP12.14□□□□□ -0.47
TRIM39-203ENST00000396547 HMOX1P09601 288 aa12.14□□□□□ -0.47
TRIM39-203ENST00000396547 ZGPATQ8N5A5 531 aaKnown RBP12.14□□□□□ -0.47
TRIM39-203ENST00000396547 PPP1R9BQ96SB3 815 aa12.13□□□□□ -0.47
TRIM39-203ENST00000396547 ATAD2Q6PL18 1390 aa12.13□□□□□ -0.47
TRIM39-203ENST00000396547 SYCE3A1L190 88 aa12.13□□□□□ -0.47
TRIM39-203ENST00000396547 PTMSP20962 102 aa12.13□□□□□ -0.47
TRIM39-203ENST00000396547 NHSL1Q5SYE7 1610 aa12.13□□□□□ -0.47
TRIM39-203ENST00000396547 ABCC11Q96J66 1382 aa12.12□□□□□ -0.47
TRIM39-203ENST00000396547 A0A0U1RQG5 324 aaPredicted RBP12.12□□□□□ -0.47
TRIM39-203ENST00000396547 TSPYL6Q8N831 410 aa12.12□□□□□ -0.47
TRIM39-203ENST00000396547 KIF16BQ96L93 1317 aa12.12□□□□□ -0.47
TRIM39-203ENST00000396547 AK9Q5TCS8 1911 aa12.11□□□□□ -0.47
TRIM39-203ENST00000396547 CDC45O75419 566 aa12.11□□□□□ -0.47
TRIM39-203ENST00000396547 JARID2Q92833 1246 aaPredicted RBP12.11□□□□□ -0.47
TRIM39-203ENST00000396547 FMN2Q9NZ56 1722 aa12.11□□□□□ -0.47
TRIM39-203ENST00000396547 ADGRL3Q9HAR2 1447 aa12.1□□□□□ -0.47
TRIM39-203ENST00000396547 ARHGEF28Q8N1W1 1705 aaKnown RBP12.1□□□□□ -0.47
TRIM39-203ENST00000396547 SMARCA5O60264 1052 aaPredicted RBP12.1□□□□□ -0.47
TRIM39-203ENST00000396547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRIM39-203ENST00000396547 OTUD7AQ8TE49 926 aaPredicted RBP12.1□□□□□ -0.47
TRIM39-203ENST00000396547 TSC1Q92574 1164 aa12.1□□□□□ -0.47
TRIM39-203ENST00000396547 LMBRD1Q9NUN5 540 aa12.1□□□□□ -0.47
TRIM39-203ENST00000396547 METP08581 1390 aa12.1□□□□□ -0.47
TRIM39-203ENST00000396547 ZBTB7BO15156 539 aaPredicted RBP12.1□□□□□ -0.47
TRIM39-203ENST00000396547 DIAPH1O60610 1272 aaKnown RBP12.09□□□□□ -0.47
TRIM39-203ENST00000396547 CT47B1P0C2W7 299 aaPredicted RBP12.09□□□□□ -0.47
TRIM39-203ENST00000396547 PRKAR2BP31323 418 aa12.09□□□□□ -0.47
TRIM39-203ENST00000396547 SIRT2Q8IXJ6 389 aa12.09□□□□□ -0.47
TRIM39-203ENST00000396547 NSFL1CQ9UNZ2 370 aaKnown RBP12.09□□□□□ -0.47
TRIM39-203ENST00000396547 PLCB2Q00722 1185 aa12.09□□□□□ -0.47
TRIM39-203ENST00000396547 GCC1Q96CN9 775 aa12.09□□□□□ -0.47
TRIM39-203ENST00000396547 PLEKHF1Q96S99 279 aa12.09□□□□□ -0.47
TRIM39-203ENST00000396547 C14orf93Q9H972 538 aaKnown RBP12.09□□□□□ -0.47
TRIM39-203ENST00000396547 FAM177BA6PVY3 158 aa12.08□□□□□ -0.48
TRIM39-203ENST00000396547 GSPT1P15170 499 aaKnown RBP12.08□□□□□ -0.48
TRIM39-203ENST00000396547 NUCB2P80303 420 aa12.08□□□□□ -0.48
TRIM39-203ENST00000396547 MINK1Q8N4C8 1332 aaPredicted RBP12.08□□□□□ -0.48
TRIM39-203ENST00000396547 ZNF830Q96NB3 372 aaPredicted RBP12.08□□□□□ -0.48
TRIM39-203ENST00000396547 EVC2Q86UK5 1308 aa12.08□□□□□ -0.48
TRIM39-203ENST00000396547 GPT2Q8TD30 523 aa12.08□□□□□ -0.48
TRIM39-203ENST00000396547 ZHX1Q9UKY1 873 aaPredicted RBP12.08□□□□□ -0.48
TRIM39-203ENST00000396547 KIF1AQ12756 1690 aa12.08□□□□□ -0.48
TRIM39-203ENST00000396547 ROBO1Q9Y6N7 1651 aa12.07□□□□□ -0.48
TRIM39-203ENST00000396547 TMEM94Q12767 1356 aa12.07□□□□□ -0.48
TRIM39-203ENST00000396547 PDE4CQ08493 712 aa12.07□□□□□ -0.48
TRIM39-203ENST00000396547 SHPRHQ149N8 1683 aa12.07□□□□□ -0.48
TRIM39-203ENST00000396547 PPIP5K1Q6PFW1 1433 aa12.07□□□□□ -0.48
TRIM39-203ENST00000396547 RABEP1Q15276 862 aa12.07□□□□□ -0.48
TRIM39-203ENST00000396547 GDPD2Q9HCC8 539 aa12.07□□□□□ -0.48
TRIM39-203ENST00000396547 TMEM63CQ9P1W3 806 aa12.06□□□□□ -0.48
TRIM39-203ENST00000396547 NOL7Q9UMY1 257 aaKnown RBP12.06□□□□□ -0.48
TRIM39-203ENST00000396547 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.06□□□□□ -0.48
TRIM39-203ENST00000396547 ZNF445P59923 1031 aa12.06□□□□□ -0.48
TRIM39-203ENST00000396547 PLEKHM2Q8IWE5 1019 aa12.06□□□□□ -0.48
TRIM39-203ENST00000396547 PHACTR3Q96KR7 559 aa12.06□□□□□ -0.48
TRIM39-203ENST00000396547 COL16A1Q07092 1604 aaPredicted RBP12.05□□□□□ -0.48
TRIM39-203ENST00000396547 DCTN1Q14203 1278 aa12.05□□□□□ -0.48
TRIM39-203ENST00000396547 YTHDC2Q9H6S0 1430 aaKnown RBP12.05□□□□□ -0.48
TRIM39-203ENST00000396547 ST18O60284 1047 aa12.05□□□□□ -0.48
TRIM39-203ENST00000396547 ZKSCAN5Q9Y2L8 839 aa12.05□□□□□ -0.48
TRIM39-203ENST00000396547 VAMP4O75379 141 aa12.04□□□□□ -0.48
TRIM39-203ENST00000396547 COL22A1Q8NFW1 1626 aaPredicted RBP12.04□□□□□ -0.48
TRIM39-203ENST00000396547 NEK4P51957 841 aa12.04□□□□□ -0.48
TRIM39-203ENST00000396547 TSHZ3Q63HK5 1081 aa12.04□□□□□ -0.48
TRIM39-203ENST00000396547 ILDR1Q86SU0 546 aaPredicted RBP12.04□□□□□ -0.48
TRIM39-203ENST00000396547 C17orf53Q8N3J3 647 aaPredicted RBP12.04□□□□□ -0.48
TRIM39-203ENST00000396547 MRPL50Q8N5N7 158 aaKnown RBP12.04□□□□□ -0.48
TRIM39-203ENST00000396547 USP26Q9BXU7 913 aa12.04□□□□□ -0.48
TRIM39-203ENST00000396547 TOPAZ1Q8N9V7 1692 aa12.04□□□□□ -0.48
TRIM39-203ENST00000396547 MST1RQ04912 1400 aa12.04□□□□□ -0.48
TRIM39-203ENST00000396547 FYB1O15117 783 aa12.04□□□□□ -0.48
TRIM39-203ENST00000396547 MSH6P52701 1360 aa12.03□□□□□ -0.48
TRIM39-203ENST00000396547 FAM83GA6ND36 823 aa12.03□□□□□ -0.48
TRIM39-203ENST00000396547 TOM1O60784 492 aa12.03□□□□□ -0.48
TRIM39-203ENST00000396547 DTNBO60941 627 aa12.03□□□□□ -0.48
TRIM39-203ENST00000396547 SDSP20132 328 aa12.03□□□□□ -0.48
TRIM39-203ENST00000396547 TWISTNBQ3B726 338 aaPredicted RBP12.03□□□□□ -0.48
TRIM39-203ENST00000396547 ALDH1L2Q3SY69 923 aa12.03□□□□□ -0.48
TRIM39-203ENST00000396547 INTS3Q68E01 1043 aaKnown RBP12.03□□□□□ -0.48
TRIM39-203ENST00000396547 C8orf58Q8NAV2 365 aa12.03□□□□□ -0.48
TRIM39-203ENST00000396547 ZDHHC9Q9Y397 364 aa12.03□□□□□ -0.48
TRIM39-203ENST00000396547 CASC1Q6TDU7 716 aa12.02□□□□□ -0.48
TRIM39-203ENST00000396547 SLC26A8Q96RN1 970 aa12.02□□□□□ -0.49
TRIM39-203ENST00000396547 CCDC39Q9UFE4 941 aa12.02□□□□□ -0.49
TRIM39-203ENST00000396547 AMOTL2Q9Y2J4 779 aa12.02□□□□□ -0.49
TRIM39-203ENST00000396547 ITSN1Q15811 1721 aa12.02□□□□□ -0.49
TRIM39-203ENST00000396547 ROBO2Q9HCK4 1378 aa12.02□□□□□ -0.49
TRIM39-203ENST00000396547 KRT24Q2M2I5 525 aa12.02□□□□□ -0.49
TRIM39-203ENST00000396547 TTC22Q5TAA0 569 aa12.02□□□□□ -0.49
TRIM39-203ENST00000396547 LRSAM1Q6UWE0 723 aa12.02□□□□□ -0.49
TRIM39-203ENST00000396547 SBNO2Q9Y2G9 1366 aa12.01□□□□□ -0.49
TRIM39-203ENST00000396547 PHLPP1O60346 1717 aa12.01□□□□□ -0.49
TRIM39-203ENST00000396547 ZNF500O60304 480 aaPredicted RBP12.01□□□□□ -0.49
TRIM39-203ENST00000396547 FGD1P98174 961 aa12.01□□□□□ -0.49
TRIM39-203ENST00000396547 MBIPQ9NS73 344 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms