RNA–Protein interactions for RNA: ENST00000395983.7

BDNF-206, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-206ENST00000395983 SIRT2Q8IXJ6 389 aa10.12□□□□□ -0.79
BDNF-206ENST00000395983 THUMPD2Q9BTF0 503 aaKnown RBP10.12□□□□□ -0.79
BDNF-206ENST00000395983 MCM5P33992 734 aa10.11□□□□□ -0.79
BDNF-206ENST00000395983 C8orf58Q8NAV2 365 aa10.11□□□□□ -0.79
BDNF-206ENST00000395983 GSPT1P15170 499 aaKnown RBP10.11□□□□□ -0.79
BDNF-206ENST00000395983 RTF1Q92541 710 aaKnown RBP10.11□□□□□ -0.79
BDNF-206ENST00000395983 MAP7D2Q96T17 732 aa10.1□□□□□ -0.79
BDNF-206ENST00000395983 CAVIN1Q6NZI2 390 aaKnown RBP10.1□□□□□ -0.79
BDNF-206ENST00000395983 CEP85Q6P2H3 762 aa10.1□□□□□ -0.79
BDNF-206ENST00000395983 GAS2L3Q86XJ1 694 aa10.1□□□□□ -0.79
BDNF-206ENST00000395983 NUDT16Q96DE0 195 aaKnown RBP10.1□□□□□ -0.79
BDNF-206ENST00000395983 RBM42Q9BTD8 480 aaKnown RBP10.1□□□□□ -0.79
BDNF-206ENST00000395983 STK31Q9BXU1 1019 aa10.1□□□□□ -0.79
BDNF-206ENST00000395983 ESF1Q9H501 851 aaKnown RBP10.1□□□□□ -0.79
BDNF-206ENST00000395983 TTC21BQ7Z4L5 1316 aa10.09□□□□□ -0.79
BDNF-206ENST00000395983 CD2BP2O95400 341 aaKnown RBP10.09□□□□□ -0.79
BDNF-206ENST00000395983 SRCIN1Q9C0H9 1055 aa10.09□□□□□ -0.79
BDNF-206ENST00000395983 EPB41L2O43491 1005 aaKnown RBP10.09□□□□□ -0.79
BDNF-206ENST00000395983 SDSP20132 328 aa10.09□□□□□ -0.79
BDNF-206ENST00000395983 ANAPC15P60006 121 aa10.09□□□□□ -0.79
BDNF-206ENST00000395983 NME9Q86XW9 330 aa10.09□□□□□ -0.79
BDNF-206ENST00000395983 CHMP4AQ9BY43 222 aa10.09□□□□□ -0.79
BDNF-206ENST00000395983 SENP3Q9H4L4 574 aaPredicted RBP10.09□□□□□ -0.79
BDNF-206ENST00000395983 GNAI3P08754 354 aa10.09□□□□□ -0.79
BDNF-206ENST00000395983 ZSCAN23Q3MJ62 389 aa10.09□□□□□ -0.79
BDNF-206ENST00000395983 OSBPL3Q9H4L5 887 aa10.09□□□□□ -0.79
BDNF-206ENST00000395983 CCDC39Q9UFE4 941 aa10.09□□□□□ -0.79
BDNF-206ENST00000395983 DLG5Q8TDM6 1919 aa10.08□□□□□ -0.8
BDNF-206ENST00000395983 CHL1O00533 1208 aa10.08□□□□□ -0.8
BDNF-206ENST00000395983 CYP2E1P05181 493 aaPredicted RBP10.08□□□□□ -0.8
BDNF-206ENST00000395983 WAPLQ7Z5K2 1190 aa10.08□□□□□ -0.8
BDNF-206ENST00000395983 ITSN1Q15811 1721 aa10.08□□□□□ -0.8
BDNF-206ENST00000395983 RTL1A6NKG5 1358 aa10.08□□□□□ -0.8
BDNF-206ENST00000395983 SOS1Q07889 1333 aaPredicted RBP10.08□□□□□ -0.8
BDNF-206ENST00000395983 OFD1O75665 1012 aa10.08□□□□□ -0.8
BDNF-206ENST00000395983 MTERF4Q7Z6M4 381 aaKnown RBP10.08□□□□□ -0.8
BDNF-206ENST00000395983 LMBRD1Q9NUN5 540 aa10.08□□□□□ -0.8
BDNF-206ENST00000395983 GNAI2P04899 355 aa10.07□□□□□ -0.8
BDNF-206ENST00000395983 SSH2Q76I76 1423 aa10.07□□□□□ -0.8
BDNF-206ENST00000395983 SULT6B1Q6IMI4 303 aa10.07□□□□□ -0.8
BDNF-206ENST00000395983 INTS4Q96HW7 963 aaKnown RBP10.07□□□□□ -0.8
BDNF-206ENST00000395983 A2ML1A8K2U0 1454 aa10.07□□□□□ -0.8
BDNF-206ENST00000395983 ATP10DQ9P241 1426 aa10.07□□□□□ -0.8
BDNF-206ENST00000395983 MON2Q7Z3U7 1717 aa10.07□□□□□ -0.8
BDNF-206ENST00000395983 PRPF40AO75400 957 aaKnown RBP10.06□□□□□ -0.8
BDNF-206ENST00000395983 LRSAM1Q6UWE0 723 aa10.06□□□□□ -0.8
BDNF-206ENST00000395983 KIAA1211Q6ZU35 1233 aa10.06□□□□□ -0.8
BDNF-206ENST00000395983 AGLP35573 1532 aa10.06□□□□□ -0.8
BDNF-206ENST00000395983 ARHGEF10O15013 1369 aa10.06□□□□□ -0.8
BDNF-206ENST00000395983 MSH6P52701 1360 aa10.06□□□□□ -0.8
BDNF-206ENST00000395983 FBXO31Q5XUX0 539 aaPredicted RBP10.06□□□□□ -0.8
BDNF-206ENST00000395983 PDCL3Q9H2J4 239 aa10.06□□□□□ -0.8
BDNF-206ENST00000395983 RRS1Q15050 365 aaKnown RBP10.06□□□□□ -0.8
BDNF-206ENST00000395983 KLHL34Q8N239 644 aa10.06□□□□□ -0.8
BDNF-206ENST00000395983 SLC4A2P04920 1241 aa10.05□□□□□ -0.8
BDNF-206ENST00000395983 NEK4P51957 841 aa10.05□□□□□ -0.8
BDNF-206ENST00000395983 LRRCC1Q9C099 1032 aa10.05□□□□□ -0.8
BDNF-206ENST00000395983 NOL7Q9UMY1 257 aaKnown RBP10.05□□□□□ -0.8
BDNF-206ENST00000395983 NRKQ7Z2Y5 1582 aa10.05□□□□□ -0.8
BDNF-206ENST00000395983 FAM184AQ8NB25 1140 aa10.05□□□□□ -0.8
BDNF-206ENST00000395983 APBB1O00213 710 aa10.05□□□□□ -0.8
BDNF-206ENST00000395983 PTMAP06454 111 aaKnown RBP10.05□□□□□ -0.8
BDNF-206ENST00000395983 PDE1AP54750 535 aa10.05□□□□□ -0.8
BDNF-206ENST00000395983 SPATA31D1Q6ZQQ2 1576 aa10.05□□□□□ -0.8
BDNF-206ENST00000395983 ERBB4Q15303 1308 aa10.05□□□□□ -0.8
BDNF-206ENST00000395983 KNDC1Q76NI1 1749 aa10.05□□□□□ -0.8
BDNF-206ENST00000395983 FAM83GA6ND36 823 aa10.04□□□□□ -0.8
BDNF-206ENST00000395983 LETM1O95202 739 aaPredicted RBP10.04□□□□□ -0.8
BDNF-206ENST00000395983 TSPYL4Q9UJ04 414 aa10.04□□□□□ -0.8
BDNF-206ENST00000395983 AOX1Q06278 1338 aa10.04□□□□□ -0.8
BDNF-206ENST00000395983 ZNF500O60304 480 aaPredicted RBP10.04□□□□□ -0.8
BDNF-206ENST00000395983 SLC4A10Q6U841 1118 aa10.04□□□□□ -0.8
BDNF-206ENST00000395983 ATP6V1DQ9Y5K8 247 aa10.04□□□□□ -0.8
BDNF-206ENST00000395983 RIMBP3CA6NJZ7 1639 aa10.04□□□□□ -0.8
BDNF-206ENST00000395983 RIMBP3BA6NNM3 1639 aa10.04□□□□□ -0.8
BDNF-206ENST00000395983 RIMBP3Q9UFD9 1639 aa10.04□□□□□ -0.8
BDNF-206ENST00000395983 HTATSF1O43719 755 aaKnown RBP10.04□□□□□ -0.8
BDNF-206ENST00000395983 EIF4A2Q14240 407 aaKnown RBP10.04□□□□□ -0.8
BDNF-206ENST00000395983 CCDC30Q5VVM6 783 aa10.04□□□□□ -0.8
BDNF-206ENST00000395983 MEIS3Q99687 375 aa10.04□□□□□ -0.8
BDNF-206ENST00000395983 AKAP12Q02952 1782 aa10.04□□□□□ -0.8
BDNF-206ENST00000395983 TECPR2O15040 1411 aa10.04□□□□□ -0.8
BDNF-206ENST00000395983 DCTN1Q14203 1278 aa10.03□□□□□ -0.8
BDNF-206ENST00000395983 WDR33Q9C0J8 1336 aaKnown RBP10.03□□□□□ -0.8
BDNF-206ENST00000395983 FBLN1P23142 703 aa10.03□□□□□ -0.8
BDNF-206ENST00000395983 C16orf71Q8IYS4 520 aaPredicted RBP10.03□□□□□ -0.8
BDNF-206ENST00000395983 PDLIM2Q96JY6 352 aa10.03□□□□□ -0.8
BDNF-206ENST00000395983 TSPY26PQ9H489 355 aa10.03□□□□□ -0.8
BDNF-206ENST00000395983 TRIM6-TRIM34B2RNG4 842 aa10.03□□□□□ -0.8
BDNF-206ENST00000395983 C3P01024 1663 aa10.03□□□□□ -0.8
BDNF-206ENST00000395983 MX1P20591 662 aa10.02□□□□□ -0.8
BDNF-206ENST00000395983 TXNDC2Q86VQ3 553 aa10.02□□□□□ -0.8
BDNF-206ENST00000395983 TMX3Q96JJ7 454 aa10.02□□□□□ -0.8
BDNF-206ENST00000395983 ESYT1Q9BSJ8 1104 aa10.02□□□□□ -0.8
BDNF-206ENST00000395983 ZKSCAN5Q9Y2L8 839 aa10.02□□□□□ -0.8
BDNF-206ENST00000395983 ANO2Q9NQ90 1003 aa10.02□□□□□ -0.81
BDNF-206ENST00000395983 TTC21AQ8NDW8 1320 aa10.02□□□□□ -0.81
BDNF-206ENST00000395983 SMARCA5O60264 1052 aaPredicted RBP10.02□□□□□ -0.81
BDNF-206ENST00000395983 UVSSAQ2YD98 709 aa10.02□□□□□ -0.81
BDNF-206ENST00000395983 CPS1P31327 1500 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms