RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 DCTPP1Q9H773 170 aa11.5□□□□□ -0.57
CDRT1-203ENST00000395667 PTPRCP08575 1304 aa11.5□□□□□ -0.57
CDRT1-203ENST00000395667 ARHGEF10O15013 1369 aa11.5□□□□□ -0.57
CDRT1-203ENST00000395667 FLT4P35916 1363 aa11.5□□□□□ -0.57
CDRT1-203ENST00000395667 CDC45O75419 566 aa11.5□□□□□ -0.57
CDRT1-203ENST00000395667 SBNO1A3KN83 1393 aa11.49□□□□□ -0.57
CDRT1-203ENST00000395667 APBB1O00213 710 aa11.49□□□□□ -0.57
CDRT1-203ENST00000395667 THEMISQ8N1K5 641 aaPredicted RBP11.49□□□□□ -0.57
CDRT1-203ENST00000395667 ANKRD44Q8N8A2 993 aa11.49□□□□□ -0.57
CDRT1-203ENST00000395667 SSH2Q76I76 1423 aa11.49□□□□□ -0.57
CDRT1-203ENST00000395667 HSP90AA1P07900 732 aaKnown RBP11.49□□□□□ -0.57
CDRT1-203ENST00000395667 MCM4P33991 863 aa11.49□□□□□ -0.57
CDRT1-203ENST00000395667 NLRP6P59044 892 aa11.49□□□□□ -0.57
CDRT1-203ENST00000395667 RPAP2Q8IXW5 612 aaPredicted RBP11.49□□□□□ -0.57
CDRT1-203ENST00000395667 SNX21Q969T3 373 aa11.49□□□□□ -0.57
CDRT1-203ENST00000395667 NALCNQ8IZF0 1738 aa11.49□□□□□ -0.57
CDRT1-203ENST00000395667 MSH6P52701 1360 aa11.49□□□□□ -0.57
CDRT1-203ENST00000395667 SLC4A10Q6U841 1118 aa11.49□□□□□ -0.57
CDRT1-203ENST00000395667 PLEKHM2Q8IWE5 1019 aa11.49□□□□□ -0.57
CDRT1-203ENST00000395667 CRB1P82279 1406 aa11.48□□□□□ -0.57
CDRT1-203ENST00000395667 NUTM2GQ5VZR2 741 aa11.48□□□□□ -0.57
CDRT1-203ENST00000395667 CEP85Q6P2H3 762 aa11.48□□□□□ -0.57
CDRT1-203ENST00000395667 GAS2L2Q8NHY3 880 aa11.48□□□□□ -0.57
CDRT1-203ENST00000395667 EYA1Q99502 592 aa11.48□□□□□ -0.57
CDRT1-203ENST00000395667 MEIS3Q99687 375 aa11.48□□□□□ -0.57
CDRT1-203ENST00000395667 RGS12O14924 1447 aa11.48□□□□□ -0.57
CDRT1-203ENST00000395667 C16orf71Q8IYS4 520 aaPredicted RBP11.47□□□□□ -0.57
CDRT1-203ENST00000395667 RGPD1P0DJD0 1748 aa11.47□□□□□ -0.57
CDRT1-203ENST00000395667 GSPT1P15170 499 aaKnown RBP11.47□□□□□ -0.57
CDRT1-203ENST00000395667 DIP2AQ14689 1571 aa11.46□□□□□ -0.57
CDRT1-203ENST00000395667 RTL1A6NKG5 1358 aa11.46□□□□□ -0.57
CDRT1-203ENST00000395667 ATP10DQ9P241 1426 aa11.46□□□□□ -0.57
CDRT1-203ENST00000395667 EIF5BO60841 1220 aaKnown RBP11.46□□□□□ -0.57
CDRT1-203ENST00000395667 TTC22Q5TAA0 569 aa11.46□□□□□ -0.57
CDRT1-203ENST00000395667 C14orf37Q86TY3 774 aa11.46□□□□□ -0.57
CDRT1-203ENST00000395667 STK31Q9BXU1 1019 aa11.46□□□□□ -0.57
CDRT1-203ENST00000395667 SLIT1O75093 1534 aa11.46□□□□□ -0.57
CDRT1-203ENST00000395667 IGSF1Q8N6C5 1336 aa11.46□□□□□ -0.58
CDRT1-203ENST00000395667 RGPD8O14715 1765 aaPredicted RBP11.46□□□□□ -0.58
CDRT1-203ENST00000395667 F6X3S4 739 aa11.46□□□□□ -0.58
CDRT1-203ENST00000395667 SMARCA5O60264 1052 aaPredicted RBP11.46□□□□□ -0.58
CDRT1-203ENST00000395667 HMMRO75330 724 aa11.46□□□□□ -0.58
CDRT1-203ENST00000395667 G2E3Q7L622 706 aa11.46□□□□□ -0.58
CDRT1-203ENST00000395667 LTV1Q96GA3 475 aaPredicted RBP11.46□□□□□ -0.58
CDRT1-203ENST00000395667 KIF2CQ99661 725 aa11.46□□□□□ -0.58
CDRT1-203ENST00000395667 GZF1Q9H116 711 aaPredicted RBP11.46□□□□□ -0.58
CDRT1-203ENST00000395667 ARHGAP23Q9P227 1491 aa11.45□□□□□ -0.58
CDRT1-203ENST00000395667 FMN2Q9NZ56 1722 aa11.45□□□□□ -0.58
CDRT1-203ENST00000395667 OTUD7AQ8TE49 926 aaPredicted RBP11.45□□□□□ -0.58
CDRT1-203ENST00000395667 ARXQ96QS3 562 aa11.45□□□□□ -0.58
CDRT1-203ENST00000395667 KDRP35968 1356 aa11.45□□□□□ -0.58
CDRT1-203ENST00000395667 RIMS1Q86UR5 1692 aaKnown RBP11.45□□□□□ -0.58
CDRT1-203ENST00000395667 CCT4P50991 539 aaKnown RBP11.45□□□□□ -0.58
CDRT1-203ENST00000395667 FOXD4L1Q9NU39 408 aa11.45□□□□□ -0.58
CDRT1-203ENST00000395667 KCNA6P17658 529 aa11.44□□□□□ -0.58
CDRT1-203ENST00000395667 L1TD1Q5T7N2 865 aaKnown RBP11.44□□□□□ -0.58
CDRT1-203ENST00000395667 ABTB2Q8N961 1025 aa11.44□□□□□ -0.58
CDRT1-203ENST00000395667 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
CDRT1-203ENST00000395667 CASC1Q6TDU7 716 aa11.44□□□□□ -0.58
CDRT1-203ENST00000395667 CEP170BQ9Y4F5 1589 aaPredicted RBP11.44□□□□□ -0.58
CDRT1-203ENST00000395667 DDX11L8A8MPP1 907 aa11.44□□□□□ -0.58
CDRT1-203ENST00000395667 GNAT3A8MTJ3 354 aa11.44□□□□□ -0.58
CDRT1-203ENST00000395667 K7ELQ4 463 aaPredicted RBP11.44□□□□□ -0.58
CDRT1-203ENST00000395667 TRAK2O60296 914 aa11.44□□□□□ -0.58
CDRT1-203ENST00000395667 NECTIN2Q92692 538 aa11.44□□□□□ -0.58
CDRT1-203ENST00000395667 NCOA3Q9Y6Q9 1424 aa11.43□□□□□ -0.58
CDRT1-203ENST00000395667 CD2BP2O95400 341 aaKnown RBP11.43□□□□□ -0.58
CDRT1-203ENST00000395667 HOXC9P31274 260 aa11.43□□□□□ -0.58
CDRT1-203ENST00000395667 FKBP5Q13451 457 aaPredicted RBP11.43□□□□□ -0.58
CDRT1-203ENST00000395667 CIZ1Q9ULV3 898 aaPredicted RBP11.43□□□□□ -0.58
CDRT1-203ENST00000395667 HTATSF1O43719 755 aaKnown RBP11.42□□□□□ -0.58
CDRT1-203ENST00000395667 CCDC30Q5VVM6 783 aa11.42□□□□□ -0.58
CDRT1-203ENST00000395667 PIK3C2AO00443 1686 aa11.42□□□□□ -0.58
CDRT1-203ENST00000395667 SDSP20132 328 aa11.42□□□□□ -0.58
CDRT1-203ENST00000395667 FER1L4A9Z1Z3 1794 aa11.41□□□□□ -0.58
CDRT1-203ENST00000395667 GNAI2P04899 355 aa11.41□□□□□ -0.58
CDRT1-203ENST00000395667 DDIT3P35638 169 aa11.41□□□□□ -0.58
CDRT1-203ENST00000395667 TNPO1Q92973 898 aaKnown RBP11.41□□□□□ -0.58
CDRT1-203ENST00000395667 ANKARQ7Z5J8 1434 aa11.41□□□□□ -0.58
CDRT1-203ENST00000395667 GOLGA6L3A6NEY3 463 aa11.41□□□□□ -0.58
CDRT1-203ENST00000395667 FLIIQ13045 1269 aa11.41□□□□□ -0.58
CDRT1-203ENST00000395667 GBP4Q96PP9 640 aa11.41□□□□□ -0.58
CDRT1-203ENST00000395667 RABEP1Q15276 862 aa11.4□□□□□ -0.58
CDRT1-203ENST00000395667 USHBP1Q8N6Y0 703 aa11.4□□□□□ -0.58
CDRT1-203ENST00000395667 EXOC6BQ9Y2D4 811 aa11.4□□□□□ -0.58
CDRT1-203ENST00000395667 MAP3K5Q99683 1374 aa11.4□□□□□ -0.59
CDRT1-203ENST00000395667 ZBTB7CA1YPR0 619 aa11.39□□□□□ -0.59
CDRT1-203ENST00000395667 TAF7Q15545 349 aaPredicted RBP11.39□□□□□ -0.59
CDRT1-203ENST00000395667 USP26Q9BXU7 913 aa11.39□□□□□ -0.59
CDRT1-203ENST00000395667 GNAI3P08754 354 aa11.39□□□□□ -0.59
CDRT1-203ENST00000395667 RAB3GAP1Q15042 981 aa11.39□□□□□ -0.59
CDRT1-203ENST00000395667 IL17REQ8NFR9 667 aa11.39□□□□□ -0.59
CDRT1-203ENST00000395667 PHF8Q9UPP1 1060 aa11.38□□□□□ -0.59
CDRT1-203ENST00000395667 XRN1Q8IZH2 1706 aaKnown RBP11.38□□□□□ -0.59
CDRT1-203ENST00000395667 REC8O95072 547 aa11.38□□□□□ -0.59
CDRT1-203ENST00000395667 RBM33Q96EV2 1170 aaKnown RBP11.38□□□□□ -0.59
CDRT1-203ENST00000395667 PDE1AP54750 535 aa11.37□□□□□ -0.59
CDRT1-203ENST00000395667 HDGFL1Q5TGJ6 251 aa11.37□□□□□ -0.59
CDRT1-203ENST00000395667 LRRCC1Q9C099 1032 aa11.37□□□□□ -0.59
CDRT1-203ENST00000395667 ERC2O15083 957 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms