RNA–Protein interactions for RNA: ENST00000395466.6

SNCAIP-204, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-204ENST00000395466 TBC1D32Q96NH3 1257 aa17.5■□□□□ 0.39
SNCAIP-204ENST00000395466 C1orf115Q9H7X2 142 aa17.5■□□□□ 0.39
SNCAIP-204ENST00000395466 ADGRL3Q9HAR2 1447 aa17.49■□□□□ 0.39
SNCAIP-204ENST00000395466 HAP1P54257 671 aaPredicted RBP17.49■□□□□ 0.39
SNCAIP-204ENST00000395466 NUTM2GQ5VZR2 741 aa17.49■□□□□ 0.39
SNCAIP-204ENST00000395466 PHF8Q9UPP1 1060 aa17.49■□□□□ 0.39
SNCAIP-204ENST00000395466 INTS3Q68E01 1043 aaKnown RBP17.48■□□□□ 0.39
SNCAIP-204ENST00000395466 CHD1LQ86WJ1 897 aa17.48■□□□□ 0.39
SNCAIP-204ENST00000395466 ABTB2Q8N961 1025 aa17.48■□□□□ 0.39
SNCAIP-204ENST00000395466 DAXXQ9UER7 740 aaPredicted RBP17.48■□□□□ 0.39
SNCAIP-204ENST00000395466 RTL5Q5HYW3 569 aaPredicted RBP17.48■□□□□ 0.39
SNCAIP-204ENST00000395466 GAS2L2Q8NHY3 880 aa17.48■□□□□ 0.39
SNCAIP-204ENST00000395466 GCC1Q96CN9 775 aa17.48■□□□□ 0.39
SNCAIP-204ENST00000395466 USP35Q9P2H5 1018 aa17.48■□□□□ 0.39
SNCAIP-204ENST00000395466 NFAT5O94916 1531 aa17.47■□□□□ 0.39
SNCAIP-204ENST00000395466 LNPKQ9C0E8 428 aa17.47■□□□□ 0.39
SNCAIP-204ENST00000395466 RTL1A6NKG5 1358 aa17.46■□□□□ 0.39
SNCAIP-204ENST00000395466 HTATSF1O43719 755 aaKnown RBP17.46■□□□□ 0.38
SNCAIP-204ENST00000395466 DEKP35659 375 aaKnown RBP17.46■□□□□ 0.38
SNCAIP-204ENST00000395466 RTF1Q92541 710 aaKnown RBP17.46■□□□□ 0.38
SNCAIP-204ENST00000395466 MIS18AQ9NYP9 233 aa17.46■□□□□ 0.38
SNCAIP-204ENST00000395466 RBM33Q96EV2 1170 aaKnown RBP17.45■□□□□ 0.38
SNCAIP-204ENST00000395466 UPF2Q9HAU5 1272 aaKnown RBP17.45■□□□□ 0.38
SNCAIP-204ENST00000395466 PTPRCP08575 1304 aa17.44■□□□□ 0.38
SNCAIP-204ENST00000395466 PHRF1Q9P1Y6 1649 aaKnown RBP17.44■□□□□ 0.38
SNCAIP-204ENST00000395466 NPHP4O75161 1426 aaPredicted RBP17.44■□□□□ 0.38
SNCAIP-204ENST00000395466 ATP10DQ9P241 1426 aa17.44■□□□□ 0.38
SNCAIP-204ENST00000395466 CACNA1FO60840 1977 aa17.44■□□□□ 0.38
SNCAIP-204ENST00000395466 TSPYL4Q9UJ04 414 aa17.44■□□□□ 0.38
SNCAIP-204ENST00000395466 FAM208AQ9UK61 1670 aaKnown RBP17.43■□□□□ 0.38
SNCAIP-204ENST00000395466 MSH6P52701 1360 aa17.42■□□□□ 0.38
SNCAIP-204ENST00000395466 ANKRD45Q5TZF3 282 aa17.42■□□□□ 0.38
SNCAIP-204ENST00000395466 RGPD2P0DJD1 1756 aa17.41■□□□□ 0.38
SNCAIP-204ENST00000395466 GNAT3A8MTJ3 354 aa17.41■□□□□ 0.38
SNCAIP-204ENST00000395466 NFKBIBQ15653 356 aa17.41■□□□□ 0.38
SNCAIP-204ENST00000395466 MAP3K5Q99683 1374 aa17.4■□□□□ 0.38
SNCAIP-204ENST00000395466 SLC4A2P04920 1241 aa17.4■□□□□ 0.38
SNCAIP-204ENST00000395466 BECN1Q14457 450 aa17.4■□□□□ 0.38
SNCAIP-204ENST00000395466 BMP2KLQ5H9B9 411 aa17.4■□□□□ 0.38
SNCAIP-204ENST00000395466 IP6K1Q92551 441 aa17.4■□□□□ 0.38
SNCAIP-204ENST00000395466 IL17REQ8NFR9 667 aa17.39■□□□□ 0.38
SNCAIP-204ENST00000395466 ESCO1Q5FWF5 840 aa17.39■□□□□ 0.37
SNCAIP-204ENST00000395466 G2E3Q7L622 706 aa17.39■□□□□ 0.37
SNCAIP-204ENST00000395466 C14orf37Q86TY3 774 aa17.39■□□□□ 0.37
SNCAIP-204ENST00000395466 ANKRD44Q8N8A2 993 aa17.39■□□□□ 0.37
SNCAIP-204ENST00000395466 LTV1Q96GA3 475 aaPredicted RBP17.39■□□□□ 0.37
SNCAIP-204ENST00000395466 DCTPP1Q9H773 170 aa17.39■□□□□ 0.37
SNCAIP-204ENST00000395466 MFAP1P55081 439 aaKnown RBP17.38■□□□□ 0.37
SNCAIP-204ENST00000395466 C22orf23Q9BZE7 217 aa17.38■□□□□ 0.37
SNCAIP-204ENST00000395466 N4BP2Q86UW6 1770 aaPredicted RBP17.37■□□□□ 0.37
SNCAIP-204ENST00000395466 SLIT3O75094 1523 aa17.37■□□□□ 0.37
SNCAIP-204ENST00000395466 PSME1Q06323 249 aa17.37■□□□□ 0.37
SNCAIP-204ENST00000395466 TBC1D2Q9BYX2 928 aa17.37■□□□□ 0.37
SNCAIP-204ENST00000395466 TRPM3Q9HCF6 1732 aaPredicted RBP17.37■□□□□ 0.37
SNCAIP-204ENST00000395466 MED1Q15648 1581 aaPredicted RBP17.36■□□□□ 0.37
SNCAIP-204ENST00000395466 CEP85Q6P2H3 762 aa17.36■□□□□ 0.37
SNCAIP-204ENST00000395466 RPAP2Q8IXW5 612 aaPredicted RBP17.36■□□□□ 0.37
SNCAIP-204ENST00000395466 USHBP1Q8N6Y0 703 aa17.36■□□□□ 0.37
SNCAIP-204ENST00000395466 MEIS3Q99687 375 aa17.36■□□□□ 0.37
SNCAIP-204ENST00000395466 BABAM1Q9NWV8 329 aa17.36■□□□□ 0.37
SNCAIP-204ENST00000395466 SOS1Q07889 1333 aaPredicted RBP17.34■□□□□ 0.37
SNCAIP-204ENST00000395466 NBPF6Q5VWK0 638 aa17.34■□□□□ 0.37
SNCAIP-204ENST00000395466 KCNH5Q8NCM2 988 aa17.34■□□□□ 0.37
SNCAIP-204ENST00000395466 CEMIPQ8WUJ3 1361 aa17.34■□□□□ 0.37
SNCAIP-204ENST00000395466 LMO7Q8WWI1 1683 aa17.34■□□□□ 0.37
SNCAIP-204ENST00000395466 NBPF4Q96M43 638 aa17.34■□□□□ 0.37
SNCAIP-204ENST00000395466 ORAI2Q96SN7 254 aa17.34■□□□□ 0.37
SNCAIP-204ENST00000395466 KDM3BQ7LBC6 1761 aa17.34■□□□□ 0.37
SNCAIP-204ENST00000395466 TAF7Q15545 349 aaPredicted RBP17.33■□□□□ 0.37
SNCAIP-204ENST00000395466 ANTXR1Q9H6X2 564 aa17.33■□□□□ 0.37
SNCAIP-204ENST00000395466 NCAPD2Q15021 1401 aa17.33■□□□□ 0.36
SNCAIP-204ENST00000395466 F6X3S4 739 aa17.33■□□□□ 0.36
SNCAIP-204ENST00000395466 RBM25P49756 843 aaKnown RBP17.33■□□□□ 0.36
SNCAIP-204ENST00000395466 PLEKHM2Q8IWE5 1019 aa17.33■□□□□ 0.36
SNCAIP-204ENST00000395466 CCT4P50991 539 aaKnown RBP17.32■□□□□ 0.36
SNCAIP-204ENST00000395466 KIF1AQ12756 1690 aa17.31■□□□□ 0.36
SNCAIP-204ENST00000395466 CCDC30Q5VVM6 783 aa17.31■□□□□ 0.36
SNCAIP-204ENST00000395466 CAMTA1Q9Y6Y1 1673 aa17.31■□□□□ 0.36
SNCAIP-204ENST00000395466 STK31Q9BXU1 1019 aa17.31■□□□□ 0.36
SNCAIP-204ENST00000395466 GSPT1P15170 499 aaKnown RBP17.3■□□□□ 0.36
SNCAIP-204ENST00000395466 FLIIQ13045 1269 aa17.3■□□□□ 0.36
SNCAIP-204ENST00000395466 TBC1D9Q6ZT07 1266 aa17.3■□□□□ 0.36
SNCAIP-204ENST00000395466 ARHGEF25Q86VW2 580 aa17.3■□□□□ 0.36
SNCAIP-204ENST00000395466 FRAT2O75474 233 aaPredicted RBP17.29■□□□□ 0.36
SNCAIP-204ENST00000395466 GCP02774 474 aa17.29■□□□□ 0.36
SNCAIP-204ENST00000395466 SLC4A10Q6U841 1118 aa17.29■□□□□ 0.36
SNCAIP-204ENST00000395466 MST1RQ04912 1400 aa17.28■□□□□ 0.36
SNCAIP-204ENST00000395466 XPCQ01831 940 aaPredicted RBP17.28■□□□□ 0.36
SNCAIP-204ENST00000395466 C16orf71Q8IYS4 520 aaPredicted RBP17.28■□□□□ 0.36
SNCAIP-204ENST00000395466 LRRC59Q96AG4 307 aaKnown RBP17.28■□□□□ 0.36
SNCAIP-204ENST00000395466 SLKQ9H2G2 1235 aaPredicted RBP17.28■□□□□ 0.36
SNCAIP-204ENST00000395466 ALS2Q96Q42 1657 aa17.28■□□□□ 0.36
SNCAIP-204ENST00000395466 RGPD5Q99666 1765 aa17.28■□□□□ 0.36
SNCAIP-204ENST00000395466 C1orf167Q5SNV9 1468 aa17.28■□□□□ 0.36
SNCAIP-204ENST00000395466 PXDNLA1KZ92 1463 aa17.27■□□□□ 0.36
SNCAIP-204ENST00000395466 TTC22Q5TAA0 569 aa17.27■□□□□ 0.35
SNCAIP-204ENST00000395466 OTUD7AQ8TE49 926 aaPredicted RBP17.27■□□□□ 0.35
SNCAIP-204ENST00000395466 LGR6Q9HBX8 967 aa17.27■□□□□ 0.35
SNCAIP-204ENST00000395466 CDC45O75419 566 aa17.26■□□□□ 0.35
SNCAIP-204ENST00000395466 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms