RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 CFAP44Q96MT7 982 aa13.16□□□□□ -0.3
HIF1A-203ENST00000394997 CHL1O00533 1208 aa13.16□□□□□ -0.3
HIF1A-203ENST00000394997 PPM1GO15355 546 aaPredicted RBP13.16□□□□□ -0.3
HIF1A-203ENST00000394997 ZKSCAN2Q63HK3 967 aa13.16□□□□□ -0.3
HIF1A-203ENST00000394997 DZIP1LQ8IYY4 767 aaKnown RBP13.16□□□□□ -0.3
HIF1A-203ENST00000394997 HSP90AB2PQ58FF8 381 aa13.15□□□□□ -0.3
HIF1A-203ENST00000394997 U2SURPO15042 1029 aaKnown RBP13.15□□□□□ -0.3
HIF1A-203ENST00000394997 ZNF428Q96B54 188 aa13.15□□□□□ -0.3
HIF1A-203ENST00000394997 RTL1A6NKG5 1358 aa13.15□□□□□ -0.31
HIF1A-203ENST00000394997 SLC26A8Q96RN1 970 aa13.14□□□□□ -0.31
HIF1A-203ENST00000394997 DDIT3P35638 169 aa13.14□□□□□ -0.31
HIF1A-203ENST00000394997 GLIPR1L2Q4G1C9 344 aa13.13□□□□□ -0.31
HIF1A-203ENST00000394997 CEMIPQ8WUJ3 1361 aa13.13□□□□□ -0.31
HIF1A-203ENST00000394997 KCNA6P17658 529 aa13.13□□□□□ -0.31
HIF1A-203ENST00000394997 SLC4A3P48751 1232 aa13.13□□□□□ -0.31
HIF1A-203ENST00000394997 FLT4P35916 1363 aa13.13□□□□□ -0.31
HIF1A-203ENST00000394997 PXDNQ92626 1479 aa13.13□□□□□ -0.31
HIF1A-203ENST00000394997 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.13□□□□□ -0.31
HIF1A-203ENST00000394997 MAPK8IP3Q9UPT6 1336 aa13.13□□□□□ -0.31
HIF1A-203ENST00000394997 NUCB1Q02818 461 aa13.12□□□□□ -0.31
HIF1A-203ENST00000394997 KIF2CQ99661 725 aa13.12□□□□□ -0.31
HIF1A-203ENST00000394997 TBC1D32Q96NH3 1257 aa13.12□□□□□ -0.31
HIF1A-203ENST00000394997 STAG3Q9UJ98 1225 aa13.12□□□□□ -0.31
HIF1A-203ENST00000394997 FRAT1Q92837 279 aaPredicted RBP13.11□□□□□ -0.31
HIF1A-203ENST00000394997 BRPF3Q9ULD4 1205 aa13.11□□□□□ -0.31
HIF1A-203ENST00000394997 PXDNLA1KZ92 1463 aa13.11□□□□□ -0.31
HIF1A-203ENST00000394997 LAMB4A4D0S4 1761 aa13.11□□□□□ -0.31
HIF1A-203ENST00000394997 DCTN1Q14203 1278 aa13.11□□□□□ -0.31
HIF1A-203ENST00000394997 KRT24Q2M2I5 525 aa13.11□□□□□ -0.31
HIF1A-203ENST00000394997 COG3Q96JB2 828 aa13.11□□□□□ -0.31
HIF1A-203ENST00000394997 NUP188Q5SRE5 1749 aa13.11□□□□□ -0.31
HIF1A-203ENST00000394997 PMFBP1Q8TBY8 1022 aa13.1□□□□□ -0.31
HIF1A-203ENST00000394997 KIF16BQ96L93 1317 aa13.1□□□□□ -0.31
HIF1A-203ENST00000394997 MRC1P22897 1456 aa13.09□□□□□ -0.31
HIF1A-203ENST00000394997 SMC4Q9NTJ3 1288 aa13.09□□□□□ -0.31
HIF1A-203ENST00000394997 HEG1Q9ULI3 1381 aa13.09□□□□□ -0.31
HIF1A-203ENST00000394997 INTS3Q68E01 1043 aaKnown RBP13.08□□□□□ -0.31
HIF1A-203ENST00000394997 AK9Q5TCS8 1911 aa13.08□□□□□ -0.32
HIF1A-203ENST00000394997 FOXO3O43524 673 aa13.08□□□□□ -0.32
HIF1A-203ENST00000394997 SALL3Q9BXA9 1300 aa13.08□□□□□ -0.32
HIF1A-203ENST00000394997 HDGFP51858 240 aaKnown RBP13.07□□□□□ -0.32
HIF1A-203ENST00000394997 MTHFSDQ2M296 383 aaKnown RBP13.07□□□□□ -0.32
HIF1A-203ENST00000394997 EYA1Q99502 592 aa13.07□□□□□ -0.32
HIF1A-203ENST00000394997 DDX19BQ9UMR2 479 aa13.07□□□□□ -0.32
HIF1A-203ENST00000394997 TJP1Q07157 1748 aa13.07□□□□□ -0.32
HIF1A-203ENST00000394997 TOGARAM1Q9Y4F4 1720 aa13.07□□□□□ -0.32
HIF1A-203ENST00000394997 RGS3P49796 1198 aa13.07□□□□□ -0.32
HIF1A-203ENST00000394997 NAP1L5Q96NT1 182 aaPredicted RBP13.06□□□□□ -0.32
HIF1A-203ENST00000394997 PNNQ9H307 717 aaKnown RBP13.06□□□□□ -0.32
HIF1A-203ENST00000394997 OVOS2A0A0G2JMS6 1433 aa13.06□□□□□ -0.32
HIF1A-203ENST00000394997 DDRGK1Q96HY6 314 aa13.06□□□□□ -0.32
HIF1A-203ENST00000394997 WNK3Q9BYP7 1800 aa13.06□□□□□ -0.32
HIF1A-203ENST00000394997 HOXC9P31274 260 aa13.06□□□□□ -0.32
HIF1A-203ENST00000394997 GNAI1P63096 354 aa13.06□□□□□ -0.32
HIF1A-203ENST00000394997 NPHP4O75161 1426 aaPredicted RBP13.05□□□□□ -0.32
HIF1A-203ENST00000394997 ARFGEF2Q9Y6D5 1785 aa13.05□□□□□ -0.32
HIF1A-203ENST00000394997 SULT6B1Q6IMI4 303 aa13.05□□□□□ -0.32
HIF1A-203ENST00000394997 THEMISQ8N1K5 641 aaPredicted RBP13.04□□□□□ -0.32
HIF1A-203ENST00000394997 TWISTNBQ3B726 338 aaPredicted RBP13.03□□□□□ -0.32
HIF1A-203ENST00000394997 MCM10Q7L590 875 aa13.03□□□□□ -0.32
HIF1A-203ENST00000394997 GSPT1P15170 499 aaKnown RBP13.02□□□□□ -0.32
HIF1A-203ENST00000394997 NHSL1Q5SYE7 1610 aa13.02□□□□□ -0.32
HIF1A-203ENST00000394997 RBM25P49756 843 aaKnown RBP13.01□□□□□ -0.33
HIF1A-203ENST00000394997 RWDD1Q9H446 243 aaPredicted RBP13.01□□□□□ -0.33
HIF1A-203ENST00000394997 IL17REQ8NFR9 667 aa13.01□□□□□ -0.33
HIF1A-203ENST00000394997 CANXP27824 592 aaKnown RBP13.01□□□□□ -0.33
HIF1A-203ENST00000394997 GSE1Q14687 1217 aa13.01□□□□□ -0.33
HIF1A-203ENST00000394997 C1orf167Q5SNV9 1468 aa13.01□□□□□ -0.33
HIF1A-203ENST00000394997 DDX60Q8IY21 1712 aaKnown RBP12.99□□□□□ -0.33
HIF1A-203ENST00000394997 G2E3Q7L622 706 aa12.99□□□□□ -0.33
HIF1A-203ENST00000394997 TBC1D2Q9BYX2 928 aa12.99□□□□□ -0.33
HIF1A-203ENST00000394997 CHD1LQ86WJ1 897 aa12.98□□□□□ -0.33
HIF1A-203ENST00000394997 ITPRIPQ8IWB1 547 aa12.98□□□□□ -0.33
HIF1A-203ENST00000394997 DCTPP1Q9H773 170 aa12.98□□□□□ -0.33
HIF1A-203ENST00000394997 NUTM2FA1L443 756 aa12.98□□□□□ -0.33
HIF1A-203ENST00000394997 AFDNP55196 1824 aaKnown RBP12.98□□□□□ -0.33
HIF1A-203ENST00000394997 C1orf115Q9H7X2 142 aa12.98□□□□□ -0.33
HIF1A-203ENST00000394997 DCCP43146 1447 aa12.97□□□□□ -0.33
HIF1A-203ENST00000394997 HTATSF1O43719 755 aaKnown RBP12.97□□□□□ -0.33
HIF1A-203ENST00000394997 EID1Q9Y6B2 187 aa12.97□□□□□ -0.33
HIF1A-203ENST00000394997 BMP2KLQ5H9B9 411 aa12.97□□□□□ -0.33
HIF1A-203ENST00000394997 CEP85Q6P2H3 762 aa12.97□□□□□ -0.33
HIF1A-203ENST00000394997 MAP3K5Q99683 1374 aa12.97□□□□□ -0.33
HIF1A-203ENST00000394997 IBTKQ9P2D0 1353 aaPredicted RBP12.97□□□□□ -0.33
HIF1A-203ENST00000394997 PTPRCP08575 1304 aa12.97□□□□□ -0.33
HIF1A-203ENST00000394997 VSIG10Q8N0Z9 540 aa12.96□□□□□ -0.33
HIF1A-203ENST00000394997 NFKBIBQ15653 356 aa12.96□□□□□ -0.33
HIF1A-203ENST00000394997 USP35Q9P2H5 1018 aa12.96□□□□□ -0.33
HIF1A-203ENST00000394997 CD2BP2O95400 341 aaKnown RBP12.96□□□□□ -0.34
HIF1A-203ENST00000394997 LMOD3Q0VAK6 560 aa12.96□□□□□ -0.34
HIF1A-203ENST00000394997 CALD1Q05682 793 aaKnown RBP12.95□□□□□ -0.34
HIF1A-203ENST00000394997 PLEKHM2Q8IWE5 1019 aa12.95□□□□□ -0.34
HIF1A-203ENST00000394997 ANKRD44Q8N8A2 993 aa12.95□□□□□ -0.34
HIF1A-203ENST00000394997 IL17RAQ96F46 866 aa12.95□□□□□ -0.34
HIF1A-203ENST00000394997 PLCH1Q4KWH8 1693 aa12.95□□□□□ -0.34
HIF1A-203ENST00000394997 SLKQ9H2G2 1235 aaPredicted RBP12.95□□□□□ -0.34
HIF1A-203ENST00000394997 KDM6AO15550 1401 aaPredicted RBP12.95□□□□□ -0.34
HIF1A-203ENST00000394997 CASZ1Q86V15 1759 aa12.95□□□□□ -0.34
HIF1A-203ENST00000394997 FTSJ3Q8IY81 847 aaKnown RBP12.94□□□□□ -0.34
HIF1A-203ENST00000394997 NBPF6Q5VWK0 638 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms