RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 MCM2P49736 904 aa12.35□□□□□ -0.43
UBE2D3-208ENST00000394803 GAS2L2Q8NHY3 880 aa12.35□□□□□ -0.43
UBE2D3-208ENST00000394803 NUDT16Q96DE0 195 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-208ENST00000394803 THUMPD2Q9BTF0 503 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-208ENST00000394803 ELL2O00472 640 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-208ENST00000394803 GSPT1P15170 499 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-208ENST00000394803 FBXO31Q5XUX0 539 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-208ENST00000394803 NME9Q86XW9 330 aa12.35□□□□□ -0.43
UBE2D3-208ENST00000394803 PPP1R9BQ96SB3 815 aa12.35□□□□□ -0.43
UBE2D3-208ENST00000394803 USP26Q9BXU7 913 aa12.35□□□□□ -0.43
UBE2D3-208ENST00000394803 NASPP49321 788 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-208ENST00000394803 ZNF445P59923 1031 aa12.34□□□□□ -0.43
UBE2D3-208ENST00000394803 HS1BP3Q53T59 392 aa12.34□□□□□ -0.43
UBE2D3-208ENST00000394803 WAPLQ7Z5K2 1190 aa12.34□□□□□ -0.43
UBE2D3-208ENST00000394803 ATP10DQ9P241 1426 aa12.34□□□□□ -0.43
UBE2D3-208ENST00000394803 TTC21BQ7Z4L5 1316 aa12.34□□□□□ -0.43
UBE2D3-208ENST00000394803 SSFA2P28290 1259 aa12.34□□□□□ -0.43
UBE2D3-208ENST00000394803 NRXN3Q9Y4C0 1643 aa12.33□□□□□ -0.44
UBE2D3-208ENST00000394803 CHL1O00533 1208 aa12.33□□□□□ -0.44
UBE2D3-208ENST00000394803 TPM2P07951 284 aa12.33□□□□□ -0.44
UBE2D3-208ENST00000394803 CEP85Q6P2H3 762 aa12.33□□□□□ -0.44
UBE2D3-208ENST00000394803 ARHGEF10O15013 1369 aa12.33□□□□□ -0.44
UBE2D3-208ENST00000394803 ERC2O15083 957 aa12.33□□□□□ -0.44
UBE2D3-208ENST00000394803 CD2BP2O95400 341 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-208ENST00000394803 MCCP23508 829 aa12.33□□□□□ -0.44
UBE2D3-208ENST00000394803 CCT4P50991 539 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-208ENST00000394803 RTL1A6NKG5 1358 aa12.32□□□□□ -0.44
UBE2D3-208ENST00000394803 OSBPL3Q9H4L5 887 aa12.32□□□□□ -0.44
UBE2D3-208ENST00000394803 RRP9O43818 475 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-208ENST00000394803 CYP2E1P05181 493 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-208ENST00000394803 SOS1Q07889 1333 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-208ENST00000394803 RGS12O14924 1447 aa12.31□□□□□ -0.44
UBE2D3-208ENST00000394803 MSNP26038 577 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-208ENST00000394803 ZSCAN30Q86W11 494 aa12.31□□□□□ -0.44
UBE2D3-208ENST00000394803 RBM42Q9BTD8 480 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-208ENST00000394803 FOXD4L1Q9NU39 408 aa12.31□□□□□ -0.44
UBE2D3-208ENST00000394803 MSH6P52701 1360 aa12.31□□□□□ -0.44
UBE2D3-208ENST00000394803 NALCNQ8IZF0 1738 aa12.3□□□□□ -0.44
UBE2D3-208ENST00000394803 EPB41L2O43491 1005 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-208ENST00000394803 GAS2L3Q86XJ1 694 aa12.3□□□□□ -0.44
UBE2D3-208ENST00000394803 MBD3O95983 291 aa12.3□□□□□ -0.44
UBE2D3-208ENST00000394803 SDSP20132 328 aa12.3□□□□□ -0.44
UBE2D3-208ENST00000394803 MCTP1Q6DN14 999 aa12.3□□□□□ -0.44
UBE2D3-208ENST00000394803 SENP3Q9H4L4 574 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-208ENST00000394803 RGPD1P0DJD0 1748 aa12.3□□□□□ -0.44
UBE2D3-208ENST00000394803 SSH2Q76I76 1423 aa12.29□□□□□ -0.44
UBE2D3-208ENST00000394803 TOPAZ1Q8N9V7 1692 aa12.29□□□□□ -0.44
UBE2D3-208ENST00000394803 TERF1P54274 439 aa12.29□□□□□ -0.44
UBE2D3-208ENST00000394803 RRS1Q15050 365 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-208ENST00000394803 SULT6B1Q6IMI4 303 aa12.29□□□□□ -0.44
UBE2D3-208ENST00000394803 FAM83GA6ND36 823 aa12.29□□□□□ -0.44
UBE2D3-208ENST00000394803 FBLN1P23142 703 aa12.29□□□□□ -0.44
UBE2D3-208ENST00000394803 ANAPC15P60006 121 aa12.29□□□□□ -0.44
UBE2D3-208ENST00000394803 EIF4A2Q14240 407 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-208ENST00000394803 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.29□□□□□ -0.44
UBE2D3-208ENST00000394803 RTF1Q92541 710 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-208ENST00000394803 ESF1Q9H501 851 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-208ENST00000394803 OVOS2A0A0J9YW53 1432 aa12.28□□□□□ -0.44
UBE2D3-208ENST00000394803 OVOS2Q6IE36 1432 aa12.28□□□□□ -0.44
UBE2D3-208ENST00000394803 SRCIN1Q9C0H9 1055 aa12.28□□□□□ -0.44
UBE2D3-208ENST00000394803 METP08581 1390 aa12.27□□□□□ -0.44
UBE2D3-208ENST00000394803 GNAI3P08754 354 aa12.27□□□□□ -0.44
UBE2D3-208ENST00000394803 SYAP1Q96A49 352 aaPredicted RBP12.27□□□□□ -0.44
UBE2D3-208ENST00000394803 STK31Q9BXU1 1019 aa12.27□□□□□ -0.44
UBE2D3-208ENST00000394803 LMBRD1Q9NUN5 540 aa12.27□□□□□ -0.44
UBE2D3-208ENST00000394803 USP31Q70CQ4 1352 aa12.27□□□□□ -0.45
UBE2D3-208ENST00000394803 HTATSF1O43719 755 aaKnown RBP12.27□□□□□ -0.45
UBE2D3-208ENST00000394803 GNAI2P04899 355 aa12.27□□□□□ -0.45
UBE2D3-208ENST00000394803 ZSCAN23Q3MJ62 389 aa12.27□□□□□ -0.45
UBE2D3-208ENST00000394803 TTC21AQ8NDW8 1320 aa12.26□□□□□ -0.45
UBE2D3-208ENST00000394803 PLEKHG3A1L390 1219 aa12.26□□□□□ -0.45
UBE2D3-208ENST00000394803 NCLP19338 710 aaKnown RBP12.26□□□□□ -0.45
UBE2D3-208ENST00000394803 MCM5P33992 734 aa12.26□□□□□ -0.45
UBE2D3-208ENST00000394803 HSP90AA2PQ14568 343 aaPredicted RBP12.26□□□□□ -0.45
UBE2D3-208ENST00000394803 TXNDC2Q86VQ3 553 aa12.26□□□□□ -0.45
UBE2D3-208ENST00000394803 FMN2Q9NZ56 1722 aa12.26□□□□□ -0.45
UBE2D3-208ENST00000394803 CACNA1FO60840 1977 aa12.26□□□□□ -0.45
UBE2D3-208ENST00000394803 CRB1P82279 1406 aa12.26□□□□□ -0.45
UBE2D3-208ENST00000394803 AOX1Q06278 1338 aa12.26□□□□□ -0.45
UBE2D3-208ENST00000394803 SLC4A2P04920 1241 aa12.26□□□□□ -0.45
UBE2D3-208ENST00000394803 DCTN1Q14203 1278 aa12.26□□□□□ -0.45
UBE2D3-208ENST00000394803 CAVIN1Q6NZI2 390 aaKnown RBP12.26□□□□□ -0.45
UBE2D3-208ENST00000394803 INTS4Q96HW7 963 aaKnown RBP12.26□□□□□ -0.45
UBE2D3-208ENST00000394803 CHMP4AQ9BY43 222 aa12.26□□□□□ -0.45
UBE2D3-208ENST00000394803 PDE1AP54750 535 aa12.25□□□□□ -0.45
UBE2D3-208ENST00000394803 MEIS3Q99687 375 aa12.25□□□□□ -0.45
UBE2D3-208ENST00000394803 ZRANB1Q9UGI0 708 aa12.25□□□□□ -0.45
UBE2D3-208ENST00000394803 USP6P35125 1406 aa12.25□□□□□ -0.45
UBE2D3-208ENST00000394803 PHF14O94880 888 aa12.25□□□□□ -0.45
UBE2D3-208ENST00000394803 C16orf71Q8IYS4 520 aaPredicted RBP12.25□□□□□ -0.45
UBE2D3-208ENST00000394803 KLHL34Q8N239 644 aa12.25□□□□□ -0.45
UBE2D3-208ENST00000394803 LRRCC1Q9C099 1032 aa12.25□□□□□ -0.45
UBE2D3-208ENST00000394803 N4BP2Q86UW6 1770 aaPredicted RBP12.25□□□□□ -0.45
UBE2D3-208ENST00000394803 PXDNLA1KZ92 1463 aa12.24□□□□□ -0.45
UBE2D3-208ENST00000394803 ERBB4Q15303 1308 aa12.24□□□□□ -0.45
UBE2D3-208ENST00000394803 CSPP1Q1MSJ5 1256 aa12.24□□□□□ -0.45
UBE2D3-208ENST00000394803 BABAM1Q9NWV8 329 aa12.24□□□□□ -0.45
UBE2D3-208ENST00000394803 TSPYL4Q9UJ04 414 aa12.24□□□□□ -0.45
UBE2D3-208ENST00000394803 OFD1O75665 1012 aa12.23□□□□□ -0.45
UBE2D3-208ENST00000394803 IL17RAQ96F46 866 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms